RNA–Protein interactions for RNA: ENST00000640999.1

STRADA-254, Transcript of STE20-related kinase adaptor alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene STRADA, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-254ENST00000640999 PRPF40BQ6NWY9 871 aaKnown RBP20.89■□□□□ 0.93
STRADA-254ENST00000640999 WDR33Q9C0J8 1336 aaKnown RBP20.89■□□□□ 0.93
STRADA-254ENST00000640999 BRINP3Q76B58 766 aa20.88■□□□□ 0.93
STRADA-254ENST00000640999 FAM227BQ96M60 508 aa20.88■□□□□ 0.93
STRADA-254ENST00000640999 NASPP49321 788 aaPredicted RBP20.88■□□□□ 0.93
STRADA-254ENST00000640999 NMIQ13287 307 aaPredicted RBP20.88■□□□□ 0.93
STRADA-254ENST00000640999 ADCK5Q3MIX3 580 aa20.88■□□□□ 0.93
STRADA-254ENST00000640999 JARID2Q92833 1246 aaPredicted RBP20.88■□□□□ 0.93
STRADA-254ENST00000640999 BOLA2Q9H3K6 86 aa20.88■□□□□ 0.93
STRADA-254ENST00000640999 ZSWIM6Q9HCJ5 1215 aa20.88■□□□□ 0.93
STRADA-254ENST00000640999 RBM27Q9P2N5 1060 aaKnown RBP20.88■□□□□ 0.93
STRADA-254ENST00000640999 NSFL1CQ9UNZ2 370 aaKnown RBP20.88■□□□□ 0.93
STRADA-254ENST00000640999 RPAP1Q9BWH6 1393 aaPredicted RBP20.87■□□□□ 0.93
STRADA-254ENST00000640999 CPA1P15085 419 aa20.87■□□□□ 0.93
STRADA-254ENST00000640999 UBE3BQ7Z3V4 1068 aa20.87■□□□□ 0.93
STRADA-254ENST00000640999 PLBD2Q8NHP8 589 aa20.87■□□□□ 0.93
STRADA-254ENST00000640999 MAP4K1Q92918 833 aa20.87■□□□□ 0.93
STRADA-254ENST00000640999 MBD3O95983 291 aa20.87■□□□□ 0.93
STRADA-254ENST00000640999 PTPN12Q05209 780 aaKnown RBP20.87■□□□□ 0.93
STRADA-254ENST00000640999 VPS53Q5VIR6 699 aa20.87■□□□□ 0.93
STRADA-254ENST00000640999 TMEM63CQ9P1W3 806 aa20.87■□□□□ 0.93
STRADA-254ENST00000640999 WDR17Q8IZU2 1322 aa20.87■□□□□ 0.93
STRADA-254ENST00000640999 JAKMIP1Q96N16 626 aaKnown RBP20.86■□□□□ 0.93
STRADA-254ENST00000640999 TCHHQ07283 1943 aa20.86■□□□□ 0.93
STRADA-254ENST00000640999 HSPA2P54652 639 aa20.86■□□□□ 0.93
STRADA-254ENST00000640999 CASP7P55210 303 aa20.86■□□□□ 0.93
STRADA-254ENST00000640999 LARP6Q9BRS8 491 aaKnown RBP20.86■□□□□ 0.93
STRADA-254ENST00000640999 RBM8AQ9Y5S9 174 aaKnown RBP20.86■□□□□ 0.93
STRADA-254ENST00000640999 UBR2Q8IWV8 1755 aa20.85■□□□□ 0.93
STRADA-254ENST00000640999 ATP5J2-PTCD1G3V325 749 aa20.85■□□□□ 0.93
STRADA-254ENST00000640999 PTCD1O75127 700 aaKnown RBP20.85■□□□□ 0.93
STRADA-254ENST00000640999 PDRG1Q9NUG6 133 aa20.85■□□□□ 0.93
STRADA-254ENST00000640999 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.85■□□□□ 0.93
STRADA-254ENST00000640999 ERBB4Q15303 1308 aa20.85■□□□□ 0.93
STRADA-254ENST00000640999 A0A087WZG4 1122 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 ZCRB1Q8TBF4 217 aaKnown RBP20.84■□□□□ 0.93
STRADA-254ENST00000640999 PPP1R9BQ96SB3 815 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 FSD1Q9BTV5 496 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 CYP46A1Q9Y6A2 500 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 PCDH11XQ9BZA7 1347 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 PCDH11YQ9BZA8 1340 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 A0A0D9SFI3 127 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 NBPF26B4DH59 902 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 NBPF14Q5TI25 921 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 CREB3L3Q68CJ9 461 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 NBPF10Q6P3W6 841 aaKnown RBP20.84■□□□□ 0.93
STRADA-254ENST00000640999 NBPF15Q8N660 670 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 PRDM11Q9NQV5 511 aa20.84■□□□□ 0.93
STRADA-254ENST00000640999 LARGE1O95461 756 aa20.83■□□□□ 0.93
STRADA-254ENST00000640999 ZKSCAN1P17029 563 aaPredicted RBP20.83■□□□□ 0.93
STRADA-254ENST00000640999 PRIM1P49642 420 aaKnown RBP20.83■□□□□ 0.93
STRADA-254ENST00000640999 CCDC173Q0VFZ6 552 aa20.83■□□□□ 0.93
STRADA-254ENST00000640999 MED23Q9ULK4 1368 aa20.83■□□□□ 0.92
STRADA-254ENST00000640999 ATP5JP18859 108 aa20.83■□□□□ 0.92
STRADA-254ENST00000640999 TFCP2Q12800 502 aa20.83■□□□□ 0.92
STRADA-254ENST00000640999 TNNI3KQ59H18 835 aa20.83■□□□□ 0.92
STRADA-254ENST00000640999 DBNLQ9UJU6 430 aaKnown RBP20.83■□□□□ 0.92
STRADA-254ENST00000640999 FPGT-TNNI3KV9GXZ4 949 aa20.83■□□□□ 0.92
STRADA-254ENST00000640999 ERVV-2B6SEH9 535 aa20.82■□□□□ 0.92
STRADA-254ENST00000640999 TOM1L2Q6ZVM7 507 aa20.82■□□□□ 0.92
STRADA-254ENST00000640999 ZSCAN31Q96LW9 406 aaPredicted RBP20.82■□□□□ 0.92
STRADA-254ENST00000640999 RBSNQ9H1K0 784 aa20.82■□□□□ 0.92
STRADA-254ENST00000640999 NUP188Q5SRE5 1749 aa20.82■□□□□ 0.92
STRADA-254ENST00000640999 COL5A2P05997 1499 aaPredicted RBP20.81■□□□□ 0.92
STRADA-254ENST00000640999 JCADQ9P266 1359 aa20.81■□□□□ 0.92
STRADA-254ENST00000640999 SOS2Q07890 1332 aaPredicted RBP20.81■□□□□ 0.92
STRADA-254ENST00000640999 ZSCAN22P10073 491 aaPredicted RBP20.81■□□□□ 0.92
STRADA-254ENST00000640999 SYT1P21579 422 aa20.81■□□□□ 0.92
STRADA-254ENST00000640999 LRSAM1Q6UWE0 723 aa20.81■□□□□ 0.92
STRADA-254ENST00000640999 SH2B1Q9NRF2 756 aaPredicted RBP20.81■□□□□ 0.92
STRADA-254ENST00000640999 SMC3Q9UQE7 1217 aa20.81■□□□□ 0.92
STRADA-254ENST00000640999 PAPPAQ13219 1627 aa20.81■□□□□ 0.92
STRADA-254ENST00000640999 H7C1W4 665 aa20.81■□□□□ 0.92
STRADA-254ENST00000640999 SLC27A2O14975 620 aa20.81■□□□□ 0.92
STRADA-254ENST00000640999 CLCN1P35523 988 aa20.81■□□□□ 0.92
STRADA-254ENST00000640999 KCNJ4P48050 445 aa20.81■□□□□ 0.92
STRADA-254ENST00000640999 NKX1-1Q15270 411 aaPredicted RBP20.81■□□□□ 0.92
STRADA-254ENST00000640999 KCPQ6ZWJ8 1503 aa20.8■□□□□ 0.92
STRADA-254ENST00000640999 STX6O43752 255 aa20.8■□□□□ 0.92
STRADA-254ENST00000640999 TRIM44Q96DX7 344 aaPredicted RBP20.8■□□□□ 0.92
STRADA-254ENST00000640999 USP48Q86UV5 1035 aa20.79■□□□□ 0.92
STRADA-254ENST00000640999 TMEM87AQ8NBN3 555 aa20.79■□□□□ 0.92
STRADA-254ENST00000640999 SYCE3A1L190 88 aa20.79■□□□□ 0.92
STRADA-254ENST00000640999 ESPNB1AK53 854 aa20.79■□□□□ 0.92
STRADA-254ENST00000640999 FOXO4P98177 505 aa20.79■□□□□ 0.92
STRADA-254ENST00000640999 FOXD4L6Q3SYB3 417 aaPredicted RBP20.79■□□□□ 0.92
STRADA-254ENST00000640999 FOXD4L3Q6VB84 417 aaPredicted RBP20.79■□□□□ 0.92
STRADA-254ENST00000640999 ANP32BQ92688 251 aaKnown RBP20.79■□□□□ 0.92
STRADA-254ENST00000640999 EDC3Q96F86 508 aaKnown RBP20.79■□□□□ 0.92
STRADA-254ENST00000640999 SHANK3Q9BYB0 1731 aa20.79■□□□□ 0.92
STRADA-254ENST00000640999 LMBR1LQ6UX01 489 aa20.78■□□□□ 0.92
STRADA-254ENST00000640999 TTLL7Q6ZT98 887 aa20.78■□□□□ 0.92
STRADA-254ENST00000640999 CCDC83Q8IWF9 413 aa20.78■□□□□ 0.92
STRADA-254ENST00000640999 GDPD2Q9HCC8 539 aa20.78■□□□□ 0.92
STRADA-254ENST00000640999 PSMA5P28066 241 aa20.78■□□□□ 0.92
STRADA-254ENST00000640999 ST3GAL1Q11201 340 aa20.78■□□□□ 0.92
STRADA-254ENST00000640999 ZNF589Q86UQ0 364 aaPredicted RBP20.78■□□□□ 0.92
STRADA-254ENST00000640999 DDX54Q8TDD1 881 aaKnown RBP20.78■□□□□ 0.92
STRADA-254ENST00000640999 TJP1Q07157 1748 aa20.78■□□□□ 0.92
STRADA-254ENST00000640999 ABCA3Q99758 1704 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms