RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 FAM184AQ8NB25 1140 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 RHPN1Q8TCX5 695 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 WNK3Q9BYP7 1800 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 KDM3BQ7LBC6 1761 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 SHANK3Q9BYB0 1731 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 BCL9LQ86UU0 1499 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 OVOS2A0A0G2JMS6 1433 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 IL2RBP14784 551 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 UVSSAQ2YD98 709 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 RNF214Q8ND24 703 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 CWF19L2Q2TBE0 894 aaKnown RBP11.44□□□□□ -0.58
PAX6-273ENST00000640610 PI4K2BQ8TCG2 481 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 UPF3BQ9BZI7 483 aaKnown RBP11.44□□□□□ -0.58
PAX6-273ENST00000640610 MAP3K2Q9Y2U5 619 aa11.44□□□□□ -0.58
PAX6-273ENST00000640610 N4BP2Q86UW6 1770 aaPredicted RBP11.43□□□□□ -0.58
PAX6-273ENST00000640610 CACNA1FO60840 1977 aa11.43□□□□□ -0.58
PAX6-273ENST00000640610 C1orf141Q5JVX7 400 aa11.43□□□□□ -0.58
PAX6-273ENST00000640610 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
PAX6-273ENST00000640610 TMX3Q96JJ7 454 aa11.43□□□□□ -0.58
PAX6-273ENST00000640610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.58
PAX6-273ENST00000640610 PA2G4Q9UQ80 394 aaKnown RBP11.43□□□□□ -0.58
PAX6-273ENST00000640610 SPG7Q9UQ90 795 aa11.43□□□□□ -0.58
PAX6-273ENST00000640610 LETM1O95202 739 aaPredicted RBP11.43□□□□□ -0.58
PAX6-273ENST00000640610 MEX3CQ5U5Q3 659 aaKnown RBP11.43□□□□□ -0.58
PAX6-273ENST00000640610 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
PAX6-273ENST00000640610 GIGYF1O75420 1035 aaPredicted RBP11.42□□□□□ -0.58
PAX6-273ENST00000640610 MCM2P49736 904 aa11.42□□□□□ -0.58
PAX6-273ENST00000640610 SLC39A6Q13433 755 aa11.42□□□□□ -0.58
PAX6-273ENST00000640610 NSFL1CQ9UNZ2 370 aaKnown RBP11.42□□□□□ -0.58
PAX6-273ENST00000640610 KIF3AQ9Y496 699 aa11.42□□□□□ -0.58
PAX6-273ENST00000640610 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.42□□□□□ -0.58
PAX6-273ENST00000640610 SCN11AQ9UI33 1791 aa11.42□□□□□ -0.58
PAX6-273ENST00000640610 CYP27B1O15528 508 aa11.42□□□□□ -0.58
PAX6-273ENST00000640610 AIMP1Q12904 312 aaKnown RBP11.42□□□□□ -0.58
PAX6-273ENST00000640610 NOLC1Q14978 699 aaKnown RBP eCLIP11.42□□□□□ -0.58
PAX6-273ENST00000640610 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
PAX6-273ENST00000640610 PLEKHG2Q9H7P9 1386 aa11.41□□□□□ -0.58
PAX6-273ENST00000640610 SPATA31A5Q5VU36 1347 aa11.41□□□□□ -0.58
PAX6-273ENST00000640610 SPATA31A7Q8IWB4 1347 aa11.41□□□□□ -0.58
PAX6-273ENST00000640610 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.41□□□□□ -0.58
PAX6-273ENST00000640610 A0A0U1RQG5 324 aaPredicted RBP11.41□□□□□ -0.58
PAX6-273ENST00000640610 PHKG2P15735 406 aa11.41□□□□□ -0.58
PAX6-273ENST00000640610 ZCRB1Q8TBF4 217 aaKnown RBP11.41□□□□□ -0.58
PAX6-273ENST00000640610 ADAMTS7Q9UKP4 1686 aa11.41□□□□□ -0.58
PAX6-273ENST00000640610 DISP2A7MBM2 1401 aa11.41□□□□□ -0.58
PAX6-273ENST00000640610 BRD1O95696 1058 aa11.41□□□□□ -0.58
PAX6-273ENST00000640610 HOXB7P09629 217 aa11.41□□□□□ -0.58
PAX6-273ENST00000640610 LARP6Q9BRS8 491 aaKnown RBP11.41□□□□□ -0.58
PAX6-273ENST00000640610 USP21Q9UK80 565 aa11.41□□□□□ -0.58
PAX6-273ENST00000640610 CCDC9Q9Y3X0 531 aaKnown RBP11.41□□□□□ -0.58
PAX6-273ENST00000640610 DTNBO60941 627 aa11.4□□□□□ -0.58
PAX6-273ENST00000640610 IFNL2Q8IZJ0 200 aa11.4□□□□□ -0.58
PAX6-273ENST00000640610 DBF4Q9UBU7 674 aaPredicted RBP11.4□□□□□ -0.58
PAX6-273ENST00000640610 SIPA1L3O60292 1781 aaPredicted RBP11.4□□□□□ -0.58
PAX6-273ENST00000640610 RAB11FIP3O75154 756 aa11.4□□□□□ -0.58
PAX6-273ENST00000640610 PIP4K2AP48426 406 aaPredicted RBP11.4□□□□□ -0.58
PAX6-273ENST00000640610 OS9Q13438 667 aaPredicted RBP11.4□□□□□ -0.58
PAX6-273ENST00000640610 KIF1BPQ96EK5 621 aa11.4□□□□□ -0.58
PAX6-273ENST00000640610 SPTLC3Q9NUV7 552 aa11.4□□□□□ -0.58
PAX6-273ENST00000640610 FOXD4L6Q3SYB3 417 aaPredicted RBP11.39□□□□□ -0.59
PAX6-273ENST00000640610 FOXD4L3Q6VB84 417 aaPredicted RBP11.39□□□□□ -0.59
PAX6-273ENST00000640610 C9orf78Q9NZ63 289 aaPredicted RBP11.39□□□□□ -0.59
PAX6-273ENST00000640610 KDM6AO15550 1401 aaPredicted RBP11.39□□□□□ -0.59
PAX6-273ENST00000640610 AFF2P51816 1311 aa11.39□□□□□ -0.59
PAX6-273ENST00000640610 VPS72Q15906 364 aa11.39□□□□□ -0.59
PAX6-273ENST00000640610 PPP4R3BQ5MIZ7 849 aa11.39□□□□□ -0.59
PAX6-273ENST00000640610 CWC27Q6UX04 472 aaKnown RBP11.39□□□□□ -0.59
PAX6-273ENST00000640610 DDX54Q8TDD1 881 aaKnown RBP11.39□□□□□ -0.59
PAX6-273ENST00000640610 FBXO41Q8TF61 875 aa11.39□□□□□ -0.59
PAX6-273ENST00000640610 PCDH11XQ9BZA7 1347 aa11.39□□□□□ -0.59
PAX6-273ENST00000640610 PCDH11YQ9BZA8 1340 aa11.39□□□□□ -0.59
PAX6-273ENST00000640610 MCCP23508 829 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 CBX1P83916 185 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 INTS4Q96HW7 963 aaKnown RBP11.38□□□□□ -0.59
PAX6-273ENST00000640610 THRAP3Q9Y2W1 955 aaKnown RBP11.38□□□□□ -0.59
PAX6-273ENST00000640610 AOX1Q06278 1338 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 HEG1Q9ULI3 1381 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 MYL6BP14649 208 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 CUL4AQ13619 759 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 PDIA6Q15084 440 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 KSR2Q6VAB6 950 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 KAZALD1Q96I82 304 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 SUCLG2Q96I99 432 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 DIAPH3Q9NSV4 1193 aa11.38□□□□□ -0.59
PAX6-273ENST00000640610 SGSM2O43147 1006 aa11.37□□□□□ -0.59
PAX6-273ENST00000640610 CPA1P15085 419 aa11.37□□□□□ -0.59
PAX6-273ENST00000640610 RASEFQ8IZ41 740 aa11.37□□□□□ -0.59
PAX6-273ENST00000640610 KLHDC4Q8TBB5 520 aa11.37□□□□□ -0.59
PAX6-273ENST00000640610 JARID2Q92833 1246 aaPredicted RBP11.37□□□□□ -0.59
PAX6-273ENST00000640610 HSPA4P34932 840 aa11.37□□□□□ -0.59
PAX6-273ENST00000640610 CHAF1AQ13111 956 aaPredicted RBP11.37□□□□□ -0.59
PAX6-273ENST00000640610 PDCL2Q8N4E4 241 aa11.37□□□□□ -0.59
PAX6-273ENST00000640610 TAF3Q5VWG9 929 aa11.37□□□□□ -0.59
PAX6-273ENST00000640610 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
PAX6-273ENST00000640610 DCAF5Q96JK2 942 aa11.37□□□□□ -0.59
PAX6-273ENST00000640610 LSG1Q9H089 658 aaKnown RBP11.37□□□□□ -0.59
PAX6-273ENST00000640610 BICC1Q9H694 974 aaKnown RBP11.37□□□□□ -0.59
PAX6-273ENST00000640610 BCL2L12Q9HB09 334 aa11.37□□□□□ -0.59
PAX6-273ENST00000640610 EXOC5O00471 708 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms