RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 BCL11BQ9C0K0 894 aaPredicted RBP17.42■□□□□ 0.38
SCARB2-221ENST00000640341 NLRP2Q9NX02 1062 aa17.42■□□□□ 0.38
SCARB2-221ENST00000640341 PIK3C2AO00443 1686 aa17.42■□□□□ 0.38
SCARB2-221ENST00000640341 BLOC1S2Q6QNY1 142 aa17.41■□□□□ 0.38
SCARB2-221ENST00000640341 MYD88Q99836 296 aa17.41■□□□□ 0.38
SCARB2-221ENST00000640341 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
SCARB2-221ENST00000640341 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
SCARB2-221ENST00000640341 AXIN2Q9Y2T1 843 aa17.41■□□□□ 0.38
SCARB2-221ENST00000640341 VPS53Q5VIR6 699 aa17.41■□□□□ 0.38
SCARB2-221ENST00000640341 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
SCARB2-221ENST00000640341 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
SCARB2-221ENST00000640341 ATP5J2-PTCD1G3V325 749 aa17.4■□□□□ 0.38
SCARB2-221ENST00000640341 PTCD1O75127 700 aaKnown RBP17.4■□□□□ 0.38
SCARB2-221ENST00000640341 DDX58O95786 925 aaKnown RBP17.4■□□□□ 0.38
SCARB2-221ENST00000640341 ZNF589Q86UQ0 364 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-221ENST00000640341 NEXNQ0ZGT2 675 aa17.4■□□□□ 0.38
SCARB2-221ENST00000640341 ST3GAL1Q11201 340 aa17.4■□□□□ 0.38
SCARB2-221ENST00000640341 CCDC129Q6ZRS4 1044 aa17.4■□□□□ 0.38
SCARB2-221ENST00000640341 PDCL3Q9H2J4 239 aa17.4■□□□□ 0.38
SCARB2-221ENST00000640341 SLC27A2O14975 620 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 FAM184AQ8NB25 1140 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 KCNH5Q8NCM2 988 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 ZSWIM6Q9HCJ5 1215 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 CSB-PGBD3P0DP91 1061 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 NECTIN1Q15223 517 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 LINS1Q8NG48 757 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 KAZALD1Q96I82 304 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 NALCNQ8IZF0 1738 aa17.39■□□□□ 0.37
SCARB2-221ENST00000640341 DRC7Q8IY82 874 aa17.38■□□□□ 0.37
SCARB2-221ENST00000640341 NFATC2IPQ8NCF5 419 aa17.38■□□□□ 0.37
SCARB2-221ENST00000640341 CHMP4AQ9BY43 222 aa17.38■□□□□ 0.37
SCARB2-221ENST00000640341 ZMYND15Q9H091 742 aa17.38■□□□□ 0.37
SCARB2-221ENST00000640341 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
SCARB2-221ENST00000640341 LIG1P18858 919 aa17.38■□□□□ 0.37
SCARB2-221ENST00000640341 EPHA10Q5JZY3 1008 aa17.38■□□□□ 0.37
SCARB2-221ENST00000640341 TTC6Q86TZ1 520 aa17.38■□□□□ 0.37
SCARB2-221ENST00000640341 SEC62Q99442 399 aaKnown RBP17.38■□□□□ 0.37
SCARB2-221ENST00000640341 ALDH1L1O75891 902 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 HOXB7P09629 217 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 MCM5P33992 734 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 KRT85P78386 507 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
SCARB2-221ENST00000640341 ZSCAN31Q96LW9 406 aaPredicted RBP17.37■□□□□ 0.37
SCARB2-221ENST00000640341 SH2B1Q9NRF2 756 aaPredicted RBP17.37■□□□□ 0.37
SCARB2-221ENST00000640341 XRN1Q8IZH2 1706 aaKnown RBP17.37■□□□□ 0.37
SCARB2-221ENST00000640341 KDM4AO75164 1064 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 NOLC1Q14978 699 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCARB2-221ENST00000640341 BICD2Q8TD16 824 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 SLFNL1Q499Z3 407 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 RNF20Q5VTR2 975 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 SASS6Q6UVJ0 657 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 UBE3BQ7Z3V4 1068 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 PKNOX2Q96KN3 472 aa17.37■□□□□ 0.37
SCARB2-221ENST00000640341 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
SCARB2-221ENST00000640341 NWD1Q149M9 1564 aa17.36■□□□□ 0.37
SCARB2-221ENST00000640341 JAK2O60674 1132 aa17.36■□□□□ 0.37
SCARB2-221ENST00000640341 IGKV5-2P06315 115 aa17.36■□□□□ 0.37
SCARB2-221ENST00000640341 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
SCARB2-221ENST00000640341 LUZP1Q86V48 1076 aa17.36■□□□□ 0.37
SCARB2-221ENST00000640341 DDX17Q92841 729 aaKnown RBP17.36■□□□□ 0.37
SCARB2-221ENST00000640341 FBXW7Q969H0 707 aa17.36■□□□□ 0.37
SCARB2-221ENST00000640341 PSMA5P28066 241 aa17.36■□□□□ 0.37
SCARB2-221ENST00000640341 RAPGEF4Q8WZA2 1011 aa17.36■□□□□ 0.37
SCARB2-221ENST00000640341 DACT1Q9NYF0 836 aa17.36■□□□□ 0.37
SCARB2-221ENST00000640341 AP5Z1O43299 807 aa17.35■□□□□ 0.37
SCARB2-221ENST00000640341 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
SCARB2-221ENST00000640341 LETM1O95202 739 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-221ENST00000640341 MAP4K1Q92918 833 aa17.35■□□□□ 0.37
SCARB2-221ENST00000640341 SPATA32Q96LK8 384 aa17.35■□□□□ 0.37
SCARB2-221ENST00000640341 PXDNLA1KZ92 1463 aa17.35■□□□□ 0.37
SCARB2-221ENST00000640341 CCDC192P0DO97 292 aa17.35■□□□□ 0.37
SCARB2-221ENST00000640341 ANKLE2Q86XL3 938 aa17.35■□□□□ 0.37
SCARB2-221ENST00000640341 TMEM87AQ8NBN3 555 aa17.35■□□□□ 0.37
SCARB2-221ENST00000640341 NUP62CLQ9H1M0 184 aa17.35■□□□□ 0.37
SCARB2-221ENST00000640341 H3BQV1 296 aa17.34■□□□□ 0.37
SCARB2-221ENST00000640341 IFFO2Q5TF58 517 aa17.34■□□□□ 0.37
SCARB2-221ENST00000640341 DDX21Q9NR30 783 aaKnown RBP eCLIP17.34■□□□□ 0.37
SCARB2-221ENST00000640341 HDAC5Q9UQL6 1122 aa17.34■□□□□ 0.37
SCARB2-221ENST00000640341 PXDNQ92626 1479 aa17.34■□□□□ 0.37
SCARB2-221ENST00000640341 EPB41L2O43491 1005 aaKnown RBP17.34■□□□□ 0.37
SCARB2-221ENST00000640341 MTX1Q13505 466 aa17.34■□□□□ 0.37
SCARB2-221ENST00000640341 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-221ENST00000640341 TFCP2Q12800 502 aa17.34■□□□□ 0.37
SCARB2-221ENST00000640341 TNMDQ9H2S6 317 aa17.34■□□□□ 0.37
SCARB2-221ENST00000640341 CABLES1Q8TDN4 633 aa17.33■□□□□ 0.37
SCARB2-221ENST00000640341 USP16Q9Y5T5 823 aa17.33■□□□□ 0.37
SCARB2-221ENST00000640341 UVSSAQ2YD98 709 aa17.33■□□□□ 0.36
SCARB2-221ENST00000640341 ZNF790Q6PG37 636 aa17.33■□□□□ 0.36
SCARB2-221ENST00000640341 MAP3K11Q16584 847 aa17.33■□□□□ 0.36
SCARB2-221ENST00000640341 ARHGEF25Q86VW2 580 aa17.33■□□□□ 0.36
SCARB2-221ENST00000640341 ZNF496Q96IT1 587 aaPredicted RBP17.33■□□□□ 0.36
SCARB2-221ENST00000640341 TTC5Q8N0Z6 440 aa17.32■□□□□ 0.36
SCARB2-221ENST00000640341 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
SCARB2-221ENST00000640341 IL17RAQ96F46 866 aa17.32■□□□□ 0.36
SCARB2-221ENST00000640341 HIP1O00291 1037 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 PIBF1Q8WXW3 757 aa17.31■□□□□ 0.36
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