RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 NKAPLQ5M9Q1 402 aa10.57□□□□□ -0.72
RFC1-217ENST00000639695 TPSG1Q9NRR2 321 aa10.57□□□□□ -0.72
RFC1-217ENST00000639695 ZBTB7BO15156 539 aaPredicted RBP10.56□□□□□ -0.72
RFC1-217ENST00000639695 ALAS2P22557 587 aa10.56□□□□□ -0.72
RFC1-217ENST00000639695 ZMYM1Q5SVZ6 1142 aa10.56□□□□□ -0.72
RFC1-217ENST00000639695 HSH2DQ96JZ2 352 aa10.56□□□□□ -0.72
RFC1-217ENST00000639695 AMOTL2Q9Y2J4 779 aa10.56□□□□□ -0.72
RFC1-217ENST00000639695 SERTM1A2A2V5 107 aa10.55□□□□□ -0.72
RFC1-217ENST00000639695 KANK4Q5T7N3 995 aaPredicted RBP10.55□□□□□ -0.72
RFC1-217ENST00000639695 MICALL1Q8N3F8 863 aa10.55□□□□□ -0.72
RFC1-217ENST00000639695 CCER1Q8TC90 406 aaPredicted RBP10.55□□□□□ -0.72
RFC1-217ENST00000639695 TNFRSF25Q93038 417 aa10.55□□□□□ -0.72
RFC1-217ENST00000639695 GNEQ9Y223 722 aaKnown RBP10.55□□□□□ -0.72
RFC1-217ENST00000639695 SPEM2Q0P670 501 aa10.54□□□□□ -0.72
RFC1-217ENST00000639695 RHPN1Q8TCX5 695 aa10.54□□□□□ -0.72
RFC1-217ENST00000639695 TSPAN10Q9H1Z9 355 aaPredicted RBP10.54□□□□□ -0.72
RFC1-217ENST00000639695 LZTS3O60299 673 aaPredicted RBP10.53□□□□□ -0.72
RFC1-217ENST00000639695 NID1P14543 1247 aa10.53□□□□□ -0.72
RFC1-217ENST00000639695 ADH7P40394 386 aa10.53□□□□□ -0.72
RFC1-217ENST00000639695 CLDN10P78369 228 aa10.53□□□□□ -0.72
RFC1-217ENST00000639695 ZNF280CQ8ND82 737 aa10.53□□□□□ -0.72
RFC1-217ENST00000639695 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
RFC1-217ENST00000639695 PSMG3-AS1Q96PY0 264 aa10.53□□□□□ -0.72
RFC1-217ENST00000639695 HCN4Q9Y3Q4 1203 aa10.53□□□□□ -0.72
RFC1-217ENST00000639695 USP17L3A6NCW0 530 aa10.52□□□□□ -0.73
RFC1-217ENST00000639695 USP17L4A6NCW7 530 aa10.52□□□□□ -0.73
RFC1-217ENST00000639695 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.52□□□□□ -0.73
RFC1-217ENST00000639695 GRIK4Q16099 956 aa10.52□□□□□ -0.73
RFC1-217ENST00000639695 PRRT3Q5FWE3 981 aa10.52□□□□□ -0.73
RFC1-217ENST00000639695 USP17L2Q6R6M4 530 aa10.52□□□□□ -0.73
RFC1-217ENST00000639695 USP17L1Q7RTZ2 530 aa10.52□□□□□ -0.73
RFC1-217ENST00000639695 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
RFC1-217ENST00000639695 NEUROD4Q9HD90 331 aa10.52□□□□□ -0.73
RFC1-217ENST00000639695 PRDM6Q9NQX0 595 aa10.52□□□□□ -0.73
RFC1-217ENST00000639695 NOVA2Q9UNW9 492 aaKnown RBP10.52□□□□□ -0.73
RFC1-217ENST00000639695 C20orf204Q6ZNR8 217 aa10.51□□□□□ -0.73
RFC1-217ENST00000639695 KRTAP9-2Q9BYQ4 174 aa10.51□□□□□ -0.73
RFC1-217ENST00000639695 GPC6Q9Y625 555 aaPredicted RBP10.51□□□□□ -0.73
RFC1-217ENST00000639695 DYRK3O43781 588 aa10.5□□□□□ -0.73
RFC1-217ENST00000639695 LARP1Q6PKG0 1096 aaKnown RBP10.5□□□□□ -0.73
RFC1-217ENST00000639695 POTEAQ6S8J7 498 aa10.5□□□□□ -0.73
RFC1-217ENST00000639695 ZNF428Q96B54 188 aa10.5□□□□□ -0.73
RFC1-217ENST00000639695 PHACTR1Q9C0D0 580 aa10.5□□□□□ -0.73
RFC1-217ENST00000639695 BRD7Q9NPI1 651 aa10.5□□□□□ -0.73
RFC1-217ENST00000639695 SFI1A8K8P3 1242 aa10.49□□□□□ -0.73
RFC1-217ENST00000639695 APBA3O96018 575 aa10.49□□□□□ -0.73
RFC1-217ENST00000639695 TYRO3Q06418 890 aa10.49□□□□□ -0.73
RFC1-217ENST00000639695 TMEM164Q5U3C3 297 aa10.49□□□□□ -0.73
RFC1-217ENST00000639695 CCDC102BQ68D86 513 aa10.49□□□□□ -0.73
RFC1-217ENST00000639695 CEP63Q96MT8 703 aa10.49□□□□□ -0.73
RFC1-217ENST00000639695 SPDYE3A6NKU9 549 aa10.48□□□□□ -0.73
RFC1-217ENST00000639695 FAM196BA6NMK8 535 aa10.48□□□□□ -0.73
RFC1-217ENST00000639695 HIRAP54198 1017 aaPredicted RBP10.48□□□□□ -0.73
RFC1-217ENST00000639695 PSMA6P60900 246 aaKnown RBP10.48□□□□□ -0.73
RFC1-217ENST00000639695 MKRN1Q9UHC7 482 aaKnown RBP10.48□□□□□ -0.73
RFC1-217ENST00000639695 ARID4AP29374 1257 aaPredicted RBP10.47□□□□□ -0.73
RFC1-217ENST00000639695 KCNQ4P56696 695 aa10.47□□□□□ -0.73
RFC1-217ENST00000639695 C1orf53Q5VUE5 145 aa10.47□□□□□ -0.73
RFC1-217ENST00000639695 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
RFC1-217ENST00000639695 ZMIZ1Q9ULJ6 1067 aa10.47□□□□□ -0.73
RFC1-217ENST00000639695 KRTAP9-6A0A140TA67 174 aa10.46□□□□□ -0.73
RFC1-217ENST00000639695 C21orf2O43822 256 aa10.46□□□□□ -0.73
RFC1-217ENST00000639695 RASA1P20936 1047 aa10.46□□□□□ -0.73
RFC1-217ENST00000639695 TRIM28Q13263 835 aaKnown RBP10.46□□□□□ -0.73
RFC1-217ENST00000639695 TRIM50Q86XT4 487 aa10.46□□□□□ -0.73
RFC1-217ENST00000639695 TSEN2Q8NCE0 465 aaKnown RBP10.46□□□□□ -0.73
RFC1-217ENST00000639695 FAM200AQ8TCP9 573 aa10.46□□□□□ -0.73
RFC1-217ENST00000639695 STK32AQ8WU08 396 aa10.46□□□□□ -0.73
RFC1-217ENST00000639695 KCNH4Q9UQ05 1017 aa10.46□□□□□ -0.73
RFC1-217ENST00000639695 DKK1O94907 266 aa10.45□□□□□ -0.74
RFC1-217ENST00000639695 BHMTQ93088 406 aa10.45□□□□□ -0.74
RFC1-217ENST00000639695 USP17L15C9J2P7 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L10C9JJH3 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L13C9JLJ4 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L12C9JPN9 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L11C9JVI0 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L21D6R901 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L18D6R9N7 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L22D6RA61 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L17D6RBQ6 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L19D6RCP7 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L20D6RJB6 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 USP17L24Q0WX57 530 aa10.44□□□□□ -0.74
RFC1-217ENST00000639695 SELPP16109 830 aa10.43□□□□□ -0.74
RFC1-217ENST00000639695 TXNDC2Q86VQ3 553 aa10.43□□□□□ -0.74
RFC1-217ENST00000639695 OGFOD1Q8N543 542 aa10.43□□□□□ -0.74
RFC1-217ENST00000639695 SCO2A0A1W2PP80 73 aa10.42□□□□□ -0.74
RFC1-217ENST00000639695 TBC1D8BQ0IIM8 1120 aa10.42□□□□□ -0.74
RFC1-217ENST00000639695 PRSS36Q5K4E3 855 aa10.42□□□□□ -0.74
RFC1-217ENST00000639695 ERCC3P19447 782 aa10.41□□□□□ -0.74
RFC1-217ENST00000639695 SSFA2P28290 1259 aa10.41□□□□□ -0.74
RFC1-217ENST00000639695 ATP1A2P50993 1020 aa10.41□□□□□ -0.74
RFC1-217ENST00000639695 PTK7Q13308 1070 aa10.41□□□□□ -0.74
RFC1-217ENST00000639695 CRTC2Q53ET0 693 aaPredicted RBP10.41□□□□□ -0.74
RFC1-217ENST00000639695 TRAPPC3LQ5T215 181 aa10.41□□□□□ -0.74
RFC1-217ENST00000639695 SHISA2Q6UWI4 295 aa10.41□□□□□ -0.74
RFC1-217ENST00000639695 ZNF594Q96JF6 807 aaPredicted RBP10.41□□□□□ -0.74
RFC1-217ENST00000639695 ANKIB1Q9P2G1 1089 aa10.41□□□□□ -0.74
RFC1-217ENST00000639695 SLC6A14Q9UN76 642 aa10.41□□□□□ -0.74
RFC1-217ENST00000639695 A0A0A0MRY4 1105 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms