RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 GBP5Q96PP8 586 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 ANAPC4Q9UJX5 808 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 CIB2O75838 187 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 POTEJP0CG39 1038 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 BCL2L12Q9HB09 334 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 NOP2P46087 812 aaKnown RBP12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 CEP85LQ5SZL2 805 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 SEC62Q99442 399 aaKnown RBP12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 A6NNZ2 444 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 DIXDC1Q155Q3 683 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 TUBB8Q3ZCM7 444 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 TTC39AQ5SRH9 613 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 DDX12PQ92771 950 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 CAPZA3Q96KX2 299 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 VCX3BQ9H321 246 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 CAPN7Q9Y6W3 813 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 FRMD3A2A2Y4 597 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 PFDN1O60925 122 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 FGFR1OPO95684 399 aaKnown RBP12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 ZC3H6P61129 1189 aaKnown RBP12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 UBAC1Q9BSL1 405 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 TPX2Q9ULW0 747 aaKnown RBP12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 CNPY2Q9Y2B0 182 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 GOLGA6CA6NDK9 693 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 GOLGA6DP0CG33 693 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 SPTY2D1Q68D10 685 aaPredicted RBP12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 INTS8Q75QN2 995 aaKnown RBP12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 GOLGA6AQ9NYA3 693 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 DESP17661 470 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 MRFAP1L1Q96HT8 127 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 SH3BGRP55822 239 aaPredicted RBP12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 CFAP58Q5T655 872 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 DNAJC25Q9H1X3 360 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 RABEP2Q9H5N1 569 aa12.47□□□□□ -0.41
KCNMA1-259ENST00000639406 MACROD2A1Z1Q3 448 aa12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 VEZTQ9HBM0 779 aa12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 MTIF2P46199 727 aaKnown RBP12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 GUCY1B3Q02153 619 aa12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 ZBTB17Q13105 803 aa12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 PNMA8AQ86V59 439 aaPredicted RBP12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 ZSCAN22P10073 491 aaPredicted RBP12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 SLFN5Q08AF3 891 aa12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 MAP7Q14244 749 aa12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 IFI16Q16666 785 aaKnown RBP12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 AOPEPQ8N6M6 819 aa12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 IKBKGQ9Y6K9 419 aa12.46□□□□□ -0.41
KCNMA1-259ENST00000639406 NEDD9Q14511 834 aa12.46□□□□□ -0.42
KCNMA1-259ENST00000639406 KARSQ15046 597 aaKnown RBP12.46□□□□□ -0.42
KCNMA1-259ENST00000639406 ZNF569Q5MCW4 686 aa12.46□□□□□ -0.42
KCNMA1-259ENST00000639406 ZMAT2Q96NC0 199 aaKnown RBP12.46□□□□□ -0.42
KCNMA1-259ENST00000639406 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.42
KCNMA1-259ENST00000639406 CYLC1P35663 651 aaPredicted RBP12.46□□□□□ -0.42
KCNMA1-259ENST00000639406 NEK11Q8NG66 645 aa12.46□□□□□ -0.42
KCNMA1-259ENST00000639406 C8orf76Q96K31 380 aa12.46□□□□□ -0.42
KCNMA1-259ENST00000639406 BAIAP2L1Q9UHR4 511 aa12.46□□□□□ -0.42
KCNMA1-259ENST00000639406 MYO1BO43795 1136 aa12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 ANKLE2Q86XL3 938 aa12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 IFT81Q8WYA0 676 aa12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 CCDC88BA6NC98 1476 aa12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 CCDC77Q9BR77 488 aa12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 SELENOOQ9BVL4 669 aa12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 MTHFSP49914 203 aa12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 VAV2P52735 878 aa12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 CTNNA3Q9UI47 895 aa12.45□□□□□ -0.42
KCNMA1-259ENST00000639406 VIMP08670 466 aaKnown RBP12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 TPD52P55327 224 aaPredicted RBP12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 AACSQ86V21 672 aa12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 RNF10Q8N5U6 811 aaKnown RBP12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 GOLGA5Q8TBA6 731 aa12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 IQCGQ9H095 443 aaKnown RBP12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 IKQ13123 557 aaPredicted RBP12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 SMIM23A6NLE4 172 aa12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 HPDP32754 393 aaPredicted RBP12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 TBC1D9Q6ZT07 1266 aa12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 RIPOR2Q9Y4F9 1068 aa12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 SLC8A1P32418 973 aa12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 CCDC174Q6PII3 467 aa12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 CTAGE1Q96RT6 745 aa12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 LZTFL1Q9NQ48 299 aa12.44□□□□□ -0.42
KCNMA1-259ENST00000639406 N4BP3O15049 544 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 ZWINTO95229 277 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 TYRO3Q06418 890 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 LARP6Q9BRS8 491 aaKnown RBP12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 KCNK9Q9NPC2 374 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 SMIM24O75264 130 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 C17orf53Q8N3J3 647 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 UBAP1LF5GYI3 381 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms