RNA–Protein interactions for RNA: ENST00000638698.1

STRADA-229, Transcript of STE20-related kinase adaptor alpha, human

TSL 5 BASIC

Gene STRADA, Length 1,302 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-229	ENST00000638698	CDCA7L	Q96GN5	454 aa		13.82	□□□□□ -0.2
STRADA-229	ENST00000638698	ISCA1	Q9BUE6	129 aa		13.82	□□□□□ -0.2
STRADA-229	ENST00000638698	CHMP4A	Q9BY43	222 aa		13.82	□□□□□ -0.2
STRADA-229	ENST00000638698	TRMT112	Q9UI30	125 aa	Known RBP	13.82	□□□□□ -0.2
STRADA-229	ENST00000638698	HCLS1	P14317	486 aa	Predicted RBP	13.81	□□□□□ -0.2
STRADA-229	ENST00000638698	NPR1	P16066	1061 aa		13.81	□□□□□ -0.2
STRADA-229	ENST00000638698	PRPF40B	Q6NWY9	871 aa	Known RBP	13.81	□□□□□ -0.2
STRADA-229	ENST00000638698	CNKSR1	Q969H4	720 aa		13.81	□□□□□ -0.2
STRADA-229	ENST00000638698	MYD88	Q99836	296 aa		13.81	□□□□□ -0.2
STRADA-229	ENST00000638698	BRCA1	P38398	1863 aa	Known RBP	13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	PI4KAP2	A4QPH2	592 aa		13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	RASSF7	Q02833	373 aa		13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	SLFN5	Q08AF3	891 aa		13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	CRY2	Q49AN0	593 aa		13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	RTL5	Q5HYW3	569 aa	Predicted RBP	13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	SLC10A5	Q5PT55	438 aa		13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	OLFM4	Q6UX06	510 aa		13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	PI4KAP1	Q8N8J0	262 aa		13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	FAM89A	Q96GI7	184 aa		13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	MAP3K2	Q9Y2U5	619 aa		13.8	□□□□□ -0.2
STRADA-229	ENST00000638698	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.79	□□□□□ -0.2
STRADA-229	ENST00000638698	PRELP	P51888	382 aa		13.79	□□□□□ -0.2
STRADA-229	ENST00000638698	C9orf131	Q5VYM1	1079 aa		13.79	□□□□□ -0.2
STRADA-229	ENST00000638698	KSR2	Q6VAB6	950 aa		13.79	□□□□□ -0.2
STRADA-229	ENST00000638698	C7orf43	Q8WVR3	580 aa		13.79	□□□□□ -0.2
STRADA-229	ENST00000638698		E9PSI1	815 aa		13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	DDX58	O95786	925 aa	Known RBP	13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	FLII	Q13045	1269 aa		13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	TRIM28	Q13263	835 aa	Known RBP	13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	SLC51A	Q86UW1	340 aa		13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	JARID2	Q92833	1246 aa	Predicted RBP	13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	NLRP3	Q96P20	1036 aa		13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	METTL22	Q9BUU2	404 aa	Predicted RBP	13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	CHD4	Q14839	1912 aa		13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	SH3TC1	Q8TE82	1336 aa		13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	ADCY9	O60503	1353 aa		13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	COL11A2	P13942	1736 aa	Predicted RBP	13.78	□□□□□ -0.2
STRADA-229	ENST00000638698	NFKBIE	O00221	500 aa		13.77	□□□□□ -0.21
STRADA-229	ENST00000638698	HOXA10	P31260	410 aa	Predicted RBP	13.77	□□□□□ -0.21
STRADA-229	ENST00000638698	ZNF526	Q8TF50	670 aa	Predicted RBP	13.77	□□□□□ -0.21
STRADA-229	ENST00000638698	RPGR	Q92834	1020 aa	Known RBP	13.77	□□□□□ -0.21
STRADA-229	ENST00000638698	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.76	□□□□□ -0.21
STRADA-229	ENST00000638698	IGKV5-2	P06315	115 aa		13.76	□□□□□ -0.21
STRADA-229	ENST00000638698	ALDH1B1	P30837	517 aa		13.76	□□□□□ -0.21
STRADA-229	ENST00000638698	FKBP5	Q13451	457 aa	Predicted RBP	13.76	□□□□□ -0.21
STRADA-229	ENST00000638698	RNF181	Q9P0P0	153 aa		13.76	□□□□□ -0.21
STRADA-229	ENST00000638698	RNF123	Q5XPI4	1314 aa		13.76	□□□□□ -0.21
STRADA-229	ENST00000638698	SLX4	Q8IY92	1834 aa		13.75	□□□□□ -0.21
STRADA-229	ENST00000638698	CWF19L2	Q2TBE0	894 aa	Known RBP	13.75	□□□□□ -0.21
STRADA-229	ENST00000638698	TRMT2A	Q8IZ69	625 aa	Known RBP	13.75	□□□□□ -0.21
STRADA-229	ENST00000638698	CCDC191	Q8NCU4	936 aa		13.75	□□□□□ -0.21
STRADA-229	ENST00000638698	RBM17	Q96I25	401 aa	Known RBP	13.75	□□□□□ -0.21
STRADA-229	ENST00000638698	RIC1	Q4ADV7	1423 aa		13.75	□□□□□ -0.21
STRADA-229	ENST00000638698	DLEC1	Q9Y238	1755 aa		13.75	□□□□□ -0.21
STRADA-229	ENST00000638698	ARFGEF1	Q9Y6D6	1849 aa		13.75	□□□□□ -0.21
STRADA-229	ENST00000638698		F6X3S4	739 aa		13.74	□□□□□ -0.21
STRADA-229	ENST00000638698	IRS4	O14654	1257 aa	Predicted RBP	13.74	□□□□□ -0.21
STRADA-229	ENST00000638698	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.74	□□□□□ -0.21
STRADA-229	ENST00000638698	CRAMP1	Q96RY5	1269 aa		13.74	□□□□□ -0.21
STRADA-229	ENST00000638698	CWC25	Q9NXE8	425 aa	Predicted RBP	13.74	□□□□□ -0.21
STRADA-229	ENST00000638698	LMNB1	P20700	586 aa		13.73	□□□□□ -0.21
STRADA-229	ENST00000638698	ABCC4	O15439	1325 aa		13.72	□□□□□ -0.21
STRADA-229	ENST00000638698	NEURL1B	A8MQ27	555 aa		13.72	□□□□□ -0.21
STRADA-229	ENST00000638698	PCCA	P05165	728 aa	Predicted RBP	13.72	□□□□□ -0.21
STRADA-229	ENST00000638698	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
STRADA-229	ENST00000638698	NEXN	Q0ZGT2	675 aa		13.72	□□□□□ -0.21
STRADA-229	ENST00000638698	CCDC93	Q567U6	631 aa		13.72	□□□□□ -0.21
STRADA-229	ENST00000638698	SOGA3	Q5TF21	947 aa		13.72	□□□□□ -0.21
STRADA-229	ENST00000638698	DNAAF4	Q8WXU2	420 aa		13.72	□□□□□ -0.21
STRADA-229	ENST00000638698	TAOK3	Q9H2K8	898 aa		13.72	□□□□□ -0.21
STRADA-229	ENST00000638698	ANKRD36C	Q5JPF3	1778 aa		13.71	□□□□□ -0.21
STRADA-229	ENST00000638698	ARFGEF2	Q9Y6D5	1785 aa		13.71	□□□□□ -0.21
STRADA-229	ENST00000638698	PPEF1	O14829	653 aa	Predicted RBP	13.71	□□□□□ -0.21
STRADA-229	ENST00000638698	SF3B3	Q15393	1217 aa	Known RBP	13.71	□□□□□ -0.21
STRADA-229	ENST00000638698	DDX46	Q7L014	1031 aa	Known RBP	13.71	□□□□□ -0.21
STRADA-229	ENST00000638698	MRPL50	Q8N5N7	158 aa	Known RBP	13.71	□□□□□ -0.21
STRADA-229	ENST00000638698	SSH1	Q8WYL5	1049 aa		13.71	□□□□□ -0.21
STRADA-229	ENST00000638698	BCL2L13	Q9BXK5	485 aa		13.71	□□□□□ -0.21
STRADA-229	ENST00000638698	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.71	□□□□□ -0.21
STRADA-229	ENST00000638698	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
STRADA-229	ENST00000638698	RTKN2	Q8IZC4	609 aa		13.7	□□□□□ -0.22
STRADA-229	ENST00000638698	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.7	□□□□□ -0.22
STRADA-229	ENST00000638698	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.7	□□□□□ -0.22
STRADA-229	ENST00000638698	LTBP3	Q9NS15	1303 aa		13.69	□□□□□ -0.22
STRADA-229	ENST00000638698		H7C1W4	665 aa		13.69	□□□□□ -0.22
STRADA-229	ENST00000638698	GRAP	Q13588	217 aa		13.69	□□□□□ -0.22
STRADA-229	ENST00000638698	GCKR	Q14397	625 aa		13.69	□□□□□ -0.22
STRADA-229	ENST00000638698	BEND3	Q5T5X7	828 aa		13.69	□□□□□ -0.22
STRADA-229	ENST00000638698	LINS1	Q8NG48	757 aa		13.69	□□□□□ -0.22
STRADA-229	ENST00000638698	GRAPL	Q8TC17	118 aa	Predicted RBP	13.69	□□□□□ -0.22
STRADA-229	ENST00000638698	CELF1	Q92879	486 aa	Known RBP	13.69	□□□□□ -0.22
STRADA-229	ENST00000638698	PDE8A	O60658	829 aa		13.68	□□□□□ -0.22
STRADA-229	ENST00000638698	BBOX1	O75936	387 aa		13.68	□□□□□ -0.22
STRADA-229	ENST00000638698	SLC4A10	Q6U841	1118 aa		13.68	□□□□□ -0.22
STRADA-229	ENST00000638698	UBE3B	Q7Z3V4	1068 aa		13.68	□□□□□ -0.22
STRADA-229	ENST00000638698	SEC31B	Q9NQW1	1179 aa		13.68	□□□□□ -0.22
STRADA-229	ENST00000638698	ATP6V0A2	Q9Y487	856 aa		13.68	□□□□□ -0.22
STRADA-229	ENST00000638698	CACNA1S	Q13698	1873 aa		13.68	□□□□□ -0.22
STRADA-229	ENST00000638698	CC2D2B	Q6DHV5	1058 aa		13.67	□□□□□ -0.22
STRADA-229	ENST00000638698	NMRK2	Q9NPI5	230 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms