RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 NYXQ9GZU5 481 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 IBTKQ9P2D0 1353 aaPredicted RBP27.98■■■□□ 2.07
SCN1B-206ENST00000638536 SRGNP10124 158 aa27.98■■■□□ 2.07
SCN1B-206ENST00000638536 ZNF622Q969S3 477 aaKnown RBP eCLIP27.98■■■□□ 2.07
SCN1B-206ENST00000638536 SLX4Q8IY92 1834 aa27.97■■■□□ 2.07
SCN1B-206ENST00000638536 KLRG2A4D1S0 409 aaPredicted RBP27.97■■■□□ 2.07
SCN1B-206ENST00000638536 PPP1R42Q7Z4L9 355 aa27.97■■■□□ 2.07
SCN1B-206ENST00000638536 UTP14AQ9BVJ6 771 aaKnown RBP27.97■■■□□ 2.07
SCN1B-206ENST00000638536 PI4KAP2A4QPH2 592 aa27.96■■■□□ 2.07
SCN1B-206ENST00000638536 C3orf67Q6ZVT6 689 aa27.96■■■□□ 2.07
SCN1B-206ENST00000638536 PI4KAP1Q8N8J0 262 aa27.96■■■□□ 2.07
SCN1B-206ENST00000638536 ADCY9O60503 1353 aa27.96■■■□□ 2.07
SCN1B-206ENST00000638536 HNRNPUQ00839 825 aaKnown RBP eCLIP27.96■■■□□ 2.07
SCN1B-206ENST00000638536 MAP3K2Q9Y2U5 619 aa27.96■■■□□ 2.07
SCN1B-206ENST00000638536 FLIIQ13045 1269 aa27.95■■■□□ 2.06
SCN1B-206ENST00000638536 TTLL6Q8N841 843 aa27.95■■■□□ 2.06
SCN1B-206ENST00000638536 MYD88Q99836 296 aa27.95■■■□□ 2.06
SCN1B-206ENST00000638536 KSR2Q6VAB6 950 aa27.94■■■□□ 2.06
SCN1B-206ENST00000638536 TRMT112Q9UI30 125 aaKnown RBP27.93■■■□□ 2.06
SCN1B-206ENST00000638536 LAMB2P55268 1798 aa27.93■■■□□ 2.06
SCN1B-206ENST00000638536 DDX58O95786 925 aaKnown RBP27.92■■■□□ 2.06
SCN1B-206ENST00000638536 MASTLQ96GX5 879 aa27.92■■■□□ 2.06
SCN1B-206ENST00000638536 METTL22Q9BUU2 404 aaPredicted RBP27.92■■■□□ 2.06
SCN1B-206ENST00000638536 PDZRN3Q9UPQ7 1066 aa27.92■■■□□ 2.06
SCN1B-206ENST00000638536 HCLS1P14317 486 aaPredicted RBP27.91■■■□□ 2.06
SCN1B-206ENST00000638536 YY1P25490 414 aa27.91■■■□□ 2.06
SCN1B-206ENST00000638536 TRIM28Q13263 835 aaKnown RBP27.91■■■□□ 2.06
SCN1B-206ENST00000638536 RTL5Q5HYW3 569 aaPredicted RBP27.91■■■□□ 2.06
SCN1B-206ENST00000638536 STYK1Q6J9G0 422 aa27.91■■■□□ 2.06
SCN1B-206ENST00000638536 ARHGAP27Q6ZUM4 889 aa27.91■■■□□ 2.06
SCN1B-206ENST00000638536 ZNF219Q9P2Y4 722 aaPredicted RBP27.91■■■□□ 2.06
SCN1B-206ENST00000638536 CRY2Q49AN0 593 aa27.9■■■□□ 2.06
SCN1B-206ENST00000638536 SLC10A5Q5PT55 438 aa27.9■■■□□ 2.06
SCN1B-206ENST00000638536 FAM89AQ96GI7 184 aa27.9■■■□□ 2.06
SCN1B-206ENST00000638536 DDX60Q8IY21 1712 aaKnown RBP27.9■■■□□ 2.06
SCN1B-206ENST00000638536 IGKV5-2P06315 115 aa27.89■■■□□ 2.06
SCN1B-206ENST00000638536 RIC1Q4ADV7 1423 aa27.89■■■□□ 2.06
SCN1B-206ENST00000638536 NPR1P16066 1061 aa27.89■■■□□ 2.05
SCN1B-206ENST00000638536 FKBP5Q13451 457 aaPredicted RBP27.89■■■□□ 2.05
SCN1B-206ENST00000638536 JARID2Q92833 1246 aaPredicted RBP27.89■■■□□ 2.05
SCN1B-206ENST00000638536 TAF1P21675 1872 aa27.88■■■□□ 2.05
SCN1B-206ENST00000638536 SH3TC1Q8TE82 1336 aa27.87■■■□□ 2.05
SCN1B-206ENST00000638536 PRPF40BQ6NWY9 871 aaKnown RBP27.87■■■□□ 2.05
SCN1B-206ENST00000638536 SBF1O95248 1867 aa27.87■■■□□ 2.05
SCN1B-206ENST00000638536 F6X3S4 739 aa27.86■■■□□ 2.05
SCN1B-206ENST00000638536 C21orf2O43822 256 aa27.86■■■□□ 2.05
SCN1B-206ENST00000638536 CWF19L2Q2TBE0 894 aaKnown RBP27.86■■■□□ 2.05
SCN1B-206ENST00000638536 CNKSR1Q969H4 720 aa27.86■■■□□ 2.05
SCN1B-206ENST00000638536 RNF123Q5XPI4 1314 aa27.86■■■□□ 2.05
SCN1B-206ENST00000638536 SLC51AQ86UW1 340 aa27.85■■■□□ 2.05
SCN1B-206ENST00000638536 MRPL50Q8N5N7 158 aaKnown RBP27.85■■■□□ 2.05
SCN1B-206ENST00000638536 SSH1Q8WYL5 1049 aa27.85■■■□□ 2.05
SCN1B-206ENST00000638536 BCL2L13Q9BXK5 485 aa27.85■■■□□ 2.05
SCN1B-206ENST00000638536 CCDC191Q8NCU4 936 aa27.85■■■□□ 2.05
SCN1B-206ENST00000638536 NLRP3Q96P20 1036 aa27.85■■■□□ 2.05
SCN1B-206ENST00000638536 CCDC88AQ3V6T2 1871 aa27.85■■■□□ 2.05
SCN1B-206ENST00000638536 OLFM4Q6UX06 510 aa27.84■■■□□ 2.05
SCN1B-206ENST00000638536 DNAAF4Q8WXU2 420 aa27.84■■■□□ 2.05
SCN1B-206ENST00000638536 C7orf43Q8WVR3 580 aa27.83■■■□□ 2.05
SCN1B-206ENST00000638536 CWC25Q9NXE8 425 aaPredicted RBP27.83■■■□□ 2.05
SCN1B-206ENST00000638536 FER1L6Q2WGJ9 1857 aa27.83■■■□□ 2.05
SCN1B-206ENST00000638536 PRELPP51888 382 aa27.82■■■□□ 2.04
SCN1B-206ENST00000638536 RASSF7Q02833 373 aa27.82■■■□□ 2.04
SCN1B-206ENST00000638536 ZBTB38Q8NAP3 1195 aaPredicted RBP27.82■■■□□ 2.04
SCN1B-206ENST00000638536 NEURL1BA8MQ27 555 aa27.81■■■□□ 2.04
SCN1B-206ENST00000638536 HOXA10P31260 410 aaPredicted RBP27.81■■■□□ 2.04
SCN1B-206ENST00000638536 RPGRQ92834 1020 aaKnown RBP27.81■■■□□ 2.04
SCN1B-206ENST00000638536 NFKBIEO00221 500 aa27.8■■■□□ 2.04
SCN1B-206ENST00000638536 IRS4O14654 1257 aaPredicted RBP27.8■■■□□ 2.04
SCN1B-206ENST00000638536 PCCAP05165 728 aaPredicted RBP27.79■■■□□ 2.04
SCN1B-206ENST00000638536 NEXNQ0ZGT2 675 aa27.79■■■□□ 2.04
SCN1B-206ENST00000638536 COL4A1P02462 1669 aa27.78■■■□□ 2.04
SCN1B-206ENST00000638536 ALDH1B1P30837 517 aa27.78■■■□□ 2.04
SCN1B-206ENST00000638536 RBM17Q96I25 401 aaKnown RBP27.78■■■□□ 2.04
SCN1B-206ENST00000638536 ZBED9Q6R2W3 1325 aa27.77■■■□□ 2.04
SCN1B-206ENST00000638536 CRAMP1Q96RY5 1269 aa27.77■■■□□ 2.04
SCN1B-206ENST00000638536 BEND3Q5T5X7 828 aa27.76■■■□□ 2.03
SCN1B-206ENST00000638536 ABCC4O15439 1325 aa27.75■■■□□ 2.03
SCN1B-206ENST00000638536 GCKRQ14397 625 aa27.75■■■□□ 2.03
SCN1B-206ENST00000638536 ALDH1L2Q3SY69 923 aa27.75■■■□□ 2.03
SCN1B-206ENST00000638536 LINS1Q8NG48 757 aa27.75■■■□□ 2.03
SCN1B-206ENST00000638536 C9orf131Q5VYM1 1079 aa27.74■■■□□ 2.03
SCN1B-206ENST00000638536 SMC4Q9NTJ3 1288 aa27.74■■■□□ 2.03
SCN1B-206ENST00000638536 SF3B3Q15393 1217 aaKnown RBP27.74■■■□□ 2.03
SCN1B-206ENST00000638536 ZNF784Q8NCA9 323 aaPredicted RBP27.74■■■□□ 2.03
SCN1B-206ENST00000638536 MYH3P11055 1940 aa27.73■■■□□ 2.03
SCN1B-206ENST00000638536 H7C1W4 665 aa27.73■■■□□ 2.03
SCN1B-206ENST00000638536 CT47B1P0C2W7 299 aaPredicted RBP27.73■■■□□ 2.03
SCN1B-206ENST00000638536 RARSP54136 660 aaKnown RBP27.72■■■□□ 2.03
SCN1B-206ENST00000638536 SLC4A10Q6U841 1118 aa27.72■■■□□ 2.03
SCN1B-206ENST00000638536 UBE3BQ7Z3V4 1068 aa27.72■■■□□ 2.03
SCN1B-206ENST00000638536 SNED1Q8TER0 1413 aa27.72■■■□□ 2.03
SCN1B-206ENST00000638536 RNF181Q9P0P0 153 aa27.71■■■□□ 2.03
SCN1B-206ENST00000638536 CDHR2Q9BYE9 1310 aa27.71■■■□□ 2.03
SCN1B-206ENST00000638536 PPEF1O14829 653 aaPredicted RBP27.7■■■□□ 2.03
SCN1B-206ENST00000638536 CASP7P55210 303 aa27.7■■■□□ 2.03
SCN1B-206ENST00000638536 DDX46Q7L014 1031 aaKnown RBP27.7■■■□□ 2.03
SCN1B-206ENST00000638536 CCDC85AQ96PX6 553 aaPredicted RBP27.7■■■□□ 2.03
SCN1B-206ENST00000638536 PDE8AO60658 829 aa27.7■■■□□ 2.02
SCN1B-206ENST00000638536 CCDC93Q567U6 631 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms