RNA–Protein interactions for RNA: ENST00000636483.1

SPTAN1-232, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-232ENST00000636483 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.68□□□□□ -1.82
SPTAN1-232ENST00000636483 TGFBR3LH3BV60 316 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 EIF1AYO14602 144 aaKnown RBP3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 AXIN1O15169 862 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 IGSF3O75054 1194 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 POLR3DP05423 398 aaPredicted RBP3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 PCSK2P16519 638 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 XPCQ01831 940 aaPredicted RBP3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 SFSWAPQ12872 951 aaKnown RBP3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 GRIN2CQ14957 1233 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 COL19A1Q14993 1142 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 TRIP4Q15650 581 aaPredicted RBP3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 ENOX2Q16206 610 aaKnown RBP3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 WDR44Q5JSH3 913 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 PI16Q6UXB8 463 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 CEP63Q96MT8 703 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 CSRNP1Q96S65 589 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 CFHR5Q9BXR6 569 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 AAASQ9NRG9 546 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 TMEM63CQ9P1W3 806 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 CNTN3Q9P232 1028 aa3.67□□□□□ -1.82
SPTAN1-232ENST00000636483 SENP3-EIF4A1A0A087X0R7 540 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 A0A1B0GTH6 734 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 UBAP1LF5GYI3 381 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 TNFRSF21O75509 655 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 DGAT1O75907 488 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 SASH3O75995 380 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 RECKO95980 971 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 F11P03951 625 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 THBS1P07996 1170 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 TARSP26639 723 aaKnown RBP3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 IRS1P35568 1242 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 USP5P45974 858 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 RIPOR1Q6ZS17 1223 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 C1orf127Q8N9H9 656 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 TMEM87AQ8NBN3 555 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 EPS8L3Q8TE67 593 aaKnown RBP3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 ALKBH8Q96BT7 664 aaKnown RBP3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 HCN2Q9UL51 889 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 GJA3Q9Y6H8 435 aa3.66□□□□□ -1.82
SPTAN1-232ENST00000636483 MAN1A2O60476 641 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 SORBS3O60504 671 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 XYLBO75191 536 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 PRPF40AO75400 957 aaKnown RBP3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 SMCPP49901 116 aaPredicted RBP3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 ARSDP51689 593 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 DAB2P98082 770 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 MRPL58Q14197 206 aaKnown RBP3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 DBN1Q16643 649 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 XKR5Q6UX68 686 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 KRT25Q7Z3Z0 450 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 ZNF438Q7Z4V0 828 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 ELP3Q9H9T3 547 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 ZFYVE28Q9HCC9 887 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 ATP13A2Q9NQ11 1180 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 STRN4Q9NRL3 753 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 CUEDC1Q9NWM3 386 aaPredicted RBP3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 DYRK1BQ9Y463 629 aa3.65□□□□□ -1.83
SPTAN1-232ENST00000636483 LOC105371045A0A1W2PR82 267 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 NRG2O14511 850 aaPredicted RBP3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 EREGO14944 169 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 CPNE3O75131 537 aaKnown RBP3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 CYP2E1P05181 493 aaPredicted RBP3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 CTSHP09668 335 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 TCF3P15923 654 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 ATP2B2Q01814 1243 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 PTSQ03393 145 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 TYRO3Q06418 890 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 PSMD2Q13200 908 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 HIF1AQ16665 826 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 CTC1Q2NKJ3 1217 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 IER5Q5VY09 327 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 ALG1LQ6GMV1 187 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 TMC4Q7Z404 712 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 PGBD3Q8N328 593 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 CCDC74AQ96AQ1 378 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 OSBPL7Q9BZF2 842 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 CRISPLD1Q9H336 500 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 MRS2Q9HD23 443 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 BRD7Q9NPI1 651 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 FAM13BQ9NYF5 915 aa3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 FNDC3AQ9Y2H6 1198 aaKnown RBP3.64□□□□□ -1.83
SPTAN1-232ENST00000636483 DCDC2BA2VCK2 349 aa3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 SLC35F4A4IF30 521 aa3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 KHNYNO15037 678 aaKnown RBP3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 ATXN7O15265 892 aaPredicted RBP3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 BNIP3LO60238 219 aa3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 RGS20O76081 388 aa3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 RPLP1P05386 114 aaKnown RBP3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 VAMP1P23763 118 aa3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 UBAP2LQ14157 1087 aaKnown RBP3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 CHRDQ9H2X0 955 aa3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 ZFATQ9P243 1243 aa3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 GMPR2Q9P2T1 348 aaKnown RBP3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 VTI1BQ9UEU0 232 aa3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 KCNH4Q9UQ05 1017 aa3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 AK5Q9Y6K8 562 aa3.63□□□□□ -1.83
SPTAN1-232ENST00000636483 PHACTR2O75167 634 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms