RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 KDM2BQ8NHM5 1336 aa11.78□□□□□ -0.52
PKP4-218ENST00000629219 ABCC12Q96J65 1359 aa11.78□□□□□ -0.52
PKP4-218ENST00000629219 SNED1Q8TER0 1413 aa11.77□□□□□ -0.52
PKP4-218ENST00000629219 PRELPP51888 382 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 PROSER3Q2NL68 480 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 CCDC184Q52MB2 194 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 SLC10A5Q5PT55 438 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 DUSP27Q5VZP5 1158 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 COPS6Q7L5N1 327 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 TNS4Q8IZW8 715 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 PLBD2Q8NHP8 589 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 ZBTB3Q9H5J0 574 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 MRS2Q9HD23 443 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 LAMB2P55268 1798 aa11.77□□□□□ -0.53
PKP4-218ENST00000629219 GTF2E1P29083 439 aaPredicted RBP11.76□□□□□ -0.53
PKP4-218ENST00000629219 RASSF7Q02833 373 aa11.76□□□□□ -0.53
PKP4-218ENST00000629219 TCIRG1Q13488 830 aa11.76□□□□□ -0.53
PKP4-218ENST00000629219 CCDC93Q567U6 631 aa11.76□□□□□ -0.53
PKP4-218ENST00000629219 SUSD4Q5VX71 490 aa11.76□□□□□ -0.53
PKP4-218ENST00000629219 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
PKP4-218ENST00000629219 TAOK3Q9H2K8 898 aa11.76□□□□□ -0.53
PKP4-218ENST00000629219 CHPF2Q9P2E5 772 aa11.76□□□□□ -0.53
PKP4-218ENST00000629219 LAS1LQ9Y4W2 734 aaKnown RBP11.76□□□□□ -0.53
PKP4-218ENST00000629219 C21orf2O43822 256 aa11.75□□□□□ -0.53
PKP4-218ENST00000629219 TRIM28Q13263 835 aaKnown RBP11.75□□□□□ -0.53
PKP4-218ENST00000629219 KRT24Q2M2I5 525 aa11.75□□□□□ -0.53
PKP4-218ENST00000629219 WWC1Q8IX03 1113 aa11.75□□□□□ -0.53
PKP4-218ENST00000629219 RTKN2Q8IZC4 609 aa11.75□□□□□ -0.53
PKP4-218ENST00000629219 CCDC24Q8N4L8 307 aa11.75□□□□□ -0.53
PKP4-218ENST00000629219 CRAMP1Q96RY5 1269 aa11.75□□□□□ -0.53
PKP4-218ENST00000629219 UTP14AQ9BVJ6 771 aaKnown RBP11.75□□□□□ -0.53
PKP4-218ENST00000629219 ERFEQ4G0M1 354 aa11.74□□□□□ -0.53
PKP4-218ENST00000629219 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
PKP4-218ENST00000629219 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
PKP4-218ENST00000629219 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
PKP4-218ENST00000629219 ISCA1Q9BUE6 129 aa11.74□□□□□ -0.53
PKP4-218ENST00000629219 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
PKP4-218ENST00000629219 GLTPD2A6NH11 291 aa11.73□□□□□ -0.53
PKP4-218ENST00000629219 ANXA1P04083 346 aa11.73□□□□□ -0.53
PKP4-218ENST00000629219 GPTP24298 496 aa11.73□□□□□ -0.53
PKP4-218ENST00000629219 FKBP4Q02790 459 aaKnown RBP eCLIP11.73□□□□□ -0.53
PKP4-218ENST00000629219 CCDC30Q5VVM6 783 aa11.73□□□□□ -0.53
PKP4-218ENST00000629219 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
PKP4-218ENST00000629219 SMC1BQ8NDV3 1235 aa11.73□□□□□ -0.53
PKP4-218ENST00000629219 NLRP3Q96P20 1036 aa11.73□□□□□ -0.53
PKP4-218ENST00000629219 PSMD1Q99460 953 aa11.73□□□□□ -0.53
PKP4-218ENST00000629219 LRRC37AA6NMS7 1700 aa11.72□□□□□ -0.53
PKP4-218ENST00000629219 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
PKP4-218ENST00000629219 RPGRQ92834 1020 aaKnown RBP11.72□□□□□ -0.53
PKP4-218ENST00000629219 RBM17Q96I25 401 aaKnown RBP11.72□□□□□ -0.53
PKP4-218ENST00000629219 SCN4AP35499 1836 aa11.72□□□□□ -0.53
PKP4-218ENST00000629219 FAM177BA6PVY3 158 aa11.71□□□□□ -0.53
PKP4-218ENST00000629219 POTECB2RU33 542 aa11.71□□□□□ -0.53
PKP4-218ENST00000629219 HSPA1AP0DMV8 641 aaKnown RBP11.71□□□□□ -0.53
PKP4-218ENST00000629219 HSPA1BP0DMV9 641 aaKnown RBP11.71□□□□□ -0.53
PKP4-218ENST00000629219 HSP90B1P14625 803 aaKnown RBP11.71□□□□□ -0.53
PKP4-218ENST00000629219 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
PKP4-218ENST00000629219 AIMP1Q12904 312 aaKnown RBP11.71□□□□□ -0.53
PKP4-218ENST00000629219 TMC4Q7Z404 712 aa11.71□□□□□ -0.53
PKP4-218ENST00000629219 C8orf58Q8NAV2 365 aa11.71□□□□□ -0.53
PKP4-218ENST00000629219 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
PKP4-218ENST00000629219 VPS33BQ9H267 617 aa11.71□□□□□ -0.53
PKP4-218ENST00000629219 DDX58O95786 925 aaKnown RBP11.7□□□□□ -0.54
PKP4-218ENST00000629219 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
PKP4-218ENST00000629219 BBOX1O75936 387 aa11.69□□□□□ -0.54
PKP4-218ENST00000629219 VEGFAP15692 232 aaPredicted RBP11.69□□□□□ -0.54
PKP4-218ENST00000629219 CCDC191Q8NCU4 936 aa11.69□□□□□ -0.54
PKP4-218ENST00000629219 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
PKP4-218ENST00000629219 FANCIQ9NVI1 1328 aa11.68□□□□□ -0.54
PKP4-218ENST00000629219 PPEF1O14829 653 aaPredicted RBP11.68□□□□□ -0.54
PKP4-218ENST00000629219 SF3B3Q15393 1217 aaKnown RBP11.68□□□□□ -0.54
PKP4-218ENST00000629219 TWISTNBQ3B726 338 aaPredicted RBP11.68□□□□□ -0.54
PKP4-218ENST00000629219 L3MBTL3Q96JM7 780 aaPredicted RBP11.68□□□□□ -0.54
PKP4-218ENST00000629219 STK31Q9BXU1 1019 aa11.68□□□□□ -0.54
PKP4-218ENST00000629219 RTFDC1Q9BY42 306 aaPredicted RBP11.68□□□□□ -0.54
PKP4-218ENST00000629219 ATP6V0A2Q9Y487 856 aa11.68□□□□□ -0.54
PKP4-218ENST00000629219 MYH3P11055 1940 aa11.68□□□□□ -0.54
PKP4-218ENST00000629219 ABCC4O15439 1325 aa11.67□□□□□ -0.54
PKP4-218ENST00000629219 ZNF521Q96K83 1311 aa11.67□□□□□ -0.54
PKP4-218ENST00000629219 IARSP41252 1262 aaKnown RBP11.67□□□□□ -0.54
PKP4-218ENST00000629219 GRAPQ13588 217 aa11.67□□□□□ -0.54
PKP4-218ENST00000629219 C3orf67Q6ZVT6 689 aa11.67□□□□□ -0.54
PKP4-218ENST00000629219 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
PKP4-218ENST00000629219 TSPYL6Q8N831 410 aa11.67□□□□□ -0.54
PKP4-218ENST00000629219 ZBTB38Q8NAP3 1195 aaPredicted RBP11.67□□□□□ -0.54
PKP4-218ENST00000629219 GRAPLQ8TC17 118 aaPredicted RBP11.67□□□□□ -0.54
PKP4-218ENST00000629219 METTL22Q9BUU2 404 aaPredicted RBP11.67□□□□□ -0.54
PKP4-218ENST00000629219 TMX4Q9H1E5 349 aaPredicted RBP11.67□□□□□ -0.54
PKP4-218ENST00000629219 FZD9O00144 591 aa11.66□□□□□ -0.54
PKP4-218ENST00000629219 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
PKP4-218ENST00000629219 POTEJP0CG39 1038 aa11.66□□□□□ -0.54
PKP4-218ENST00000629219 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
PKP4-218ENST00000629219 DDX46Q7L014 1031 aaKnown RBP11.66□□□□□ -0.54
PKP4-218ENST00000629219 SP8Q8IXZ3 490 aa11.66□□□□□ -0.54
PKP4-218ENST00000629219 SYNE4Q8N205 404 aa11.66□□□□□ -0.54
PKP4-218ENST00000629219 SUPT20HQ8NEM7 779 aa11.66□□□□□ -0.54
PKP4-218ENST00000629219 TSR2Q969E8 191 aaKnown RBP11.66□□□□□ -0.54
PKP4-218ENST00000629219 MYH16Q9H6N6 1097 aa11.66□□□□□ -0.54
PKP4-218ENST00000629219 PHAXQ9H814 394 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms