RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 MIER1Q8N108 512 aa26.59■■□□□ 1.85
CIRBP-246ENST00000628979 MYH16Q9H6N6 1097 aa26.59■■□□□ 1.85
CIRBP-246ENST00000628979 IBTKQ9P2D0 1353 aaPredicted RBP26.58■■□□□ 1.85
CIRBP-246ENST00000628979 ATP5J2-PTCD1G3V325 749 aa26.58■■□□□ 1.85
CIRBP-246ENST00000628979 TNRC6CQ9HCJ0 1690 aaKnown RBP26.57■■□□□ 1.84
CIRBP-246ENST00000628979 KLRG2A4D1S0 409 aaPredicted RBP26.57■■□□□ 1.84
CIRBP-246ENST00000628979 TRMT112Q9UI30 125 aaKnown RBP26.57■■□□□ 1.84
CIRBP-246ENST00000628979 SLX4Q8IY92 1834 aa26.56■■□□□ 1.84
CIRBP-246ENST00000628979 RASSF7Q02833 373 aa26.56■■□□□ 1.84
CIRBP-246ENST00000628979 PRPF40BQ6NWY9 871 aaKnown RBP26.56■■□□□ 1.84
CIRBP-246ENST00000628979 DDX58O95786 925 aaKnown RBP26.55■■□□□ 1.84
CIRBP-246ENST00000628979 C9orf131Q5VYM1 1079 aa26.55■■□□□ 1.84
CIRBP-246ENST00000628979 RPGRQ92834 1020 aaKnown RBP26.55■■□□□ 1.84
CIRBP-246ENST00000628979 ARFGEF2Q9Y6D5 1785 aa26.55■■□□□ 1.84
CIRBP-246ENST00000628979 VAMP4O75379 141 aa26.54■■□□□ 1.84
CIRBP-246ENST00000628979 SLC4A2P04920 1241 aa26.54■■□□□ 1.84
CIRBP-246ENST00000628979 SYNE4Q8N205 404 aa26.54■■□□□ 1.84
CIRBP-246ENST00000628979 ZNF526Q8TF50 670 aaPredicted RBP26.54■■□□□ 1.84
CIRBP-246ENST00000628979 MYD88Q99836 296 aa26.54■■□□□ 1.84
CIRBP-246ENST00000628979 ISCA1Q9BUE6 129 aa26.54■■□□□ 1.84
CIRBP-246ENST00000628979 C3orf67Q6ZVT6 689 aa26.53■■□□□ 1.84
CIRBP-246ENST00000628979 NLRP3Q96P20 1036 aa26.53■■□□□ 1.84
CIRBP-246ENST00000628979 ZNF521Q96K83 1311 aa26.53■■□□□ 1.84
CIRBP-246ENST00000628979 HCLS1P14317 486 aaPredicted RBP26.52■■□□□ 1.84
CIRBP-246ENST00000628979 ALDH1B1P30837 517 aa26.52■■□□□ 1.84
CIRBP-246ENST00000628979 G2E3Q7L622 706 aa26.52■■□□□ 1.84
CIRBP-246ENST00000628979 RNF181Q9P0P0 153 aa26.52■■□□□ 1.84
CIRBP-246ENST00000628979 SH3TC1Q8TE82 1336 aa26.51■■□□□ 1.83
CIRBP-246ENST00000628979 ADCY9O60503 1353 aa26.5■■□□□ 1.83
CIRBP-246ENST00000628979 RNF123Q5XPI4 1314 aa26.5■■□□□ 1.83
CIRBP-246ENST00000628979 CRY2Q49AN0 593 aa26.5■■□□□ 1.83
CIRBP-246ENST00000628979 RTL5Q5HYW3 569 aaPredicted RBP26.5■■□□□ 1.83
CIRBP-246ENST00000628979 SLC10A5Q5PT55 438 aa26.5■■□□□ 1.83
CIRBP-246ENST00000628979 RBM17Q96I25 401 aaKnown RBP26.5■■□□□ 1.83
CIRBP-246ENST00000628979 MAP3K2Q9Y2U5 619 aa26.5■■□□□ 1.83
CIRBP-246ENST00000628979 RIC1Q4ADV7 1423 aa26.49■■□□□ 1.83
CIRBP-246ENST00000628979 SBF1O95248 1867 aa26.49■■□□□ 1.83
CIRBP-246ENST00000628979 FAM89AQ96GI7 184 aa26.49■■□□□ 1.83
CIRBP-246ENST00000628979 PI4KAP2A4QPH2 592 aa26.48■■□□□ 1.83
CIRBP-246ENST00000628979 NFKBIEO00221 500 aa26.48■■□□□ 1.83
CIRBP-246ENST00000628979 KSR2Q6VAB6 950 aa26.48■■□□□ 1.83
CIRBP-246ENST00000628979 PI4KAP1Q8N8J0 262 aa26.48■■□□□ 1.83
CIRBP-246ENST00000628979 METTL22Q9BUU2 404 aaPredicted RBP26.48■■□□□ 1.83
CIRBP-246ENST00000628979 SOGA3Q5TF21 947 aa26.47■■□□□ 1.83
CIRBP-246ENST00000628979 OLFM4Q6UX06 510 aa26.47■■□□□ 1.83
CIRBP-246ENST00000628979 CCDC88AQ3V6T2 1871 aa26.47■■□□□ 1.83
CIRBP-246ENST00000628979 LMNB1P20700 586 aa26.46■■□□□ 1.83
CIRBP-246ENST00000628979 PRELPP51888 382 aa26.46■■□□□ 1.83
CIRBP-246ENST00000628979 TRIM28Q13263 835 aaKnown RBP26.46■■□□□ 1.83
CIRBP-246ENST00000628979 GPBP1L1Q9HC44 474 aaPredicted RBP26.46■■□□□ 1.83
CIRBP-246ENST00000628979 E9PSI1 815 aa26.45■■□□□ 1.82
CIRBP-246ENST00000628979 HOXA10P31260 410 aaPredicted RBP26.45■■□□□ 1.82
CIRBP-246ENST00000628979 FLIIQ13045 1269 aa26.45■■□□□ 1.82
CIRBP-246ENST00000628979 CCDC93Q567U6 631 aa26.45■■□□□ 1.82
CIRBP-246ENST00000628979 C7orf43Q8WVR3 580 aa26.45■■□□□ 1.82
CIRBP-246ENST00000628979 FKBP5Q13451 457 aaPredicted RBP26.44■■□□□ 1.82
CIRBP-246ENST00000628979 JARID2Q92833 1246 aaPredicted RBP26.44■■□□□ 1.82
CIRBP-246ENST00000628979 CDCA7LQ96GN5 454 aa26.44■■□□□ 1.82
CIRBP-246ENST00000628979 TAOK3Q9H2K8 898 aa26.44■■□□□ 1.82
CIRBP-246ENST00000628979 FER1L6Q2WGJ9 1857 aa26.44■■□□□ 1.82
CIRBP-246ENST00000628979 LAMB2P55268 1798 aa26.43■■□□□ 1.82
CIRBP-246ENST00000628979 SLFN5Q08AF3 891 aa26.43■■□□□ 1.82
CIRBP-246ENST00000628979 CCDC191Q8NCU4 936 aa26.43■■□□□ 1.82
CIRBP-246ENST00000628979 CRAMP1Q96RY5 1269 aa26.43■■□□□ 1.82
CIRBP-246ENST00000628979 CWC25Q9NXE8 425 aaPredicted RBP26.43■■□□□ 1.82
CIRBP-246ENST00000628979 CACNA1FO60840 1977 aa26.42■■□□□ 1.82
CIRBP-246ENST00000628979 IRS4O14654 1257 aaPredicted RBP26.42■■□□□ 1.82
CIRBP-246ENST00000628979 NEXNQ0ZGT2 675 aa26.42■■□□□ 1.82
CIRBP-246ENST00000628979 PPEF1O14829 653 aaPredicted RBP26.41■■□□□ 1.82
CIRBP-246ENST00000628979 ZBTB38Q8NAP3 1195 aaPredicted RBP26.41■■□□□ 1.82
CIRBP-246ENST00000628979 DDX60Q8IY21 1712 aaKnown RBP26.4■■□□□ 1.82
CIRBP-246ENST00000628979 DDX46Q7L014 1031 aaKnown RBP26.4■■□□□ 1.82
CIRBP-246ENST00000628979 ABCC4O15439 1325 aa26.39■■□□□ 1.82
CIRBP-246ENST00000628979 IGKV5-2P06315 115 aa26.39■■□□□ 1.82
CIRBP-246ENST00000628979 RTKN2Q8IZC4 609 aa26.39■■□□□ 1.82
CIRBP-246ENST00000628979 CWF19L2Q2TBE0 894 aaKnown RBP26.38■■□□□ 1.81
CIRBP-246ENST00000628979 SLC51AQ86UW1 340 aa26.38■■□□□ 1.81
CIRBP-246ENST00000628979 LTBP3Q9NS15 1303 aa26.38■■□□□ 1.81
CIRBP-246ENST00000628979 PCCAP05165 728 aaPredicted RBP26.37■■□□□ 1.81
CIRBP-246ENST00000628979 FKBP4Q02790 459 aaKnown RBP eCLIP26.37■■□□□ 1.81
CIRBP-246ENST00000628979 DNAAF4Q8WXU2 420 aa26.37■■□□□ 1.81
CIRBP-246ENST00000628979 TMX4Q9H1E5 349 aaPredicted RBP26.37■■□□□ 1.81
CIRBP-246ENST00000628979 ZNF277Q9NRM2 450 aaPredicted RBP26.36■■□□□ 1.81
CIRBP-246ENST00000628979 TAF1P21675 1872 aa26.36■■□□□ 1.81
CIRBP-246ENST00000628979 NEURL1BA8MQ27 555 aa26.35■■□□□ 1.81
CIRBP-246ENST00000628979 F6X3S4 739 aa26.34■■□□□ 1.81
CIRBP-246ENST00000628979 HSP90B1P14625 803 aaKnown RBP26.34■■□□□ 1.81
CIRBP-246ENST00000628979 GRAPQ13588 217 aa26.34■■□□□ 1.81
CIRBP-246ENST00000628979 SF3B3Q15393 1217 aaKnown RBP26.34■■□□□ 1.81
CIRBP-246ENST00000628979 CC2D2BQ6DHV5 1058 aa26.34■■□□□ 1.81
CIRBP-246ENST00000628979 GRAPLQ8TC17 118 aaPredicted RBP26.34■■□□□ 1.81
CIRBP-246ENST00000628979 TIAM2Q8IVF5 1701 aa26.34■■□□□ 1.81
CIRBP-246ENST00000628979 BBOX1O75936 387 aa26.33■■□□□ 1.81
CIRBP-246ENST00000628979 DICER1Q9UPY3 1922 aaKnown RBP26.33■■□□□ 1.81
CIRBP-246ENST00000628979 CCDC85AQ96PX6 553 aaPredicted RBP26.32■■□□□ 1.8
CIRBP-246ENST00000628979 NMRK2Q9NPI5 230 aa26.32■■□□□ 1.8
CIRBP-246ENST00000628979 ATP6V0A2Q9Y487 856 aa26.32■■□□□ 1.8
CIRBP-246ENST00000628979 KDM2BQ8NHM5 1336 aa26.32■■□□□ 1.8
CIRBP-246ENST00000628979 PDE8AO60658 829 aa26.31■■□□□ 1.8
CIRBP-246ENST00000628979 TRMT2AQ8IZ69 625 aaKnown RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 886.1 ms