RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 KLRG1Q96E93 195 aa21.76■■□□□ 1.07
PDCD6-214ENST00000628729 ADAMTSL1Q8N6G6 1762 aa21.75■■□□□ 1.07
PDCD6-214ENST00000628729 NECTIN2Q92692 538 aa21.75■■□□□ 1.07
PDCD6-214ENST00000628729 SCN4AP35499 1836 aa21.75■■□□□ 1.07
PDCD6-214ENST00000628729 CHL1O00533 1208 aa21.74■■□□□ 1.07
PDCD6-214ENST00000628729 RUNDC1Q96C34 613 aa21.74■■□□□ 1.07
PDCD6-214ENST00000628729 ADAMTS8Q9UP79 889 aa21.74■■□□□ 1.07
PDCD6-214ENST00000628729 HOXA10P31260 410 aaPredicted RBP21.73■■□□□ 1.07
PDCD6-214ENST00000628729 PRKRIP1Q9H875 184 aaPredicted RBP21.73■■□□□ 1.07
PDCD6-214ENST00000628729 ALDH1B1P30837 517 aa21.72■■□□□ 1.07
PDCD6-214ENST00000628729 LTBP1Q14766 1721 aa21.72■■□□□ 1.07
PDCD6-214ENST00000628729 WDR43Q15061 677 aaKnown RBP eCLIP21.71■■□□□ 1.07
PDCD6-214ENST00000628729 RTKN2Q8IZC4 609 aa21.71■■□□□ 1.07
PDCD6-214ENST00000628729 JMYQ8N9B5 988 aa21.71■■□□□ 1.07
PDCD6-214ENST00000628729 L3MBTL3Q96JM7 780 aaPredicted RBP21.71■■□□□ 1.07
PDCD6-214ENST00000628729 DDX60Q8IY21 1712 aaKnown RBP21.71■■□□□ 1.07
PDCD6-214ENST00000628729 IARSP41252 1262 aaKnown RBP21.7■■□□□ 1.06
PDCD6-214ENST00000628729 SYNE4Q8N205 404 aa21.7■■□□□ 1.06
PDCD6-214ENST00000628729 XAGE3Q8WTP9 111 aa21.7■■□□□ 1.06
PDCD6-214ENST00000628729 PARP10Q53GL7 1025 aa21.69■■□□□ 1.06
PDCD6-214ENST00000628729 IFFO2Q5TF58 517 aa21.69■■□□□ 1.06
PDCD6-214ENST00000628729 COPS6Q7L5N1 327 aa21.69■■□□□ 1.06
PDCD6-214ENST00000628729 RPGRQ92834 1020 aaKnown RBP21.69■■□□□ 1.06
PDCD6-214ENST00000628729 PSMD1Q99460 953 aa21.69■■□□□ 1.06
PDCD6-214ENST00000628729 CHPF2Q9P2E5 772 aa21.69■■□□□ 1.06
PDCD6-214ENST00000628729 AIMP1Q12904 312 aaKnown RBP21.68■■□□□ 1.06
PDCD6-214ENST00000628729 DDX21Q9NR30 783 aaKnown RBP eCLIP21.68■■□□□ 1.06
PDCD6-214ENST00000628729 LAS1LQ9Y4W2 734 aaKnown RBP21.68■■□□□ 1.06
PDCD6-214ENST00000628729 COL4A1P02462 1669 aa21.68■■□□□ 1.06
PDCD6-214ENST00000628729 TAF1P21675 1872 aa21.68■■□□□ 1.06
PDCD6-214ENST00000628729 FZD9O00144 591 aa21.67■■□□□ 1.06
PDCD6-214ENST00000628729 PPP1R42Q7Z4L9 355 aa21.67■■□□□ 1.06
PDCD6-214ENST00000628729 NLRP10Q86W26 655 aa21.67■■□□□ 1.06
PDCD6-214ENST00000628729 CRAMP1Q96RY5 1269 aa21.67■■□□□ 1.06
PDCD6-214ENST00000628729 TAF1DQ9H5J8 278 aaPredicted RBP21.67■■□□□ 1.06
PDCD6-214ENST00000628729 PPEF1O14829 653 aaPredicted RBP21.66■■□□□ 1.06
PDCD6-214ENST00000628729 CHADLQ6NUI6 762 aa21.66■■□□□ 1.06
PDCD6-214ENST00000628729 UTP14AQ9BVJ6 771 aaKnown RBP21.66■■□□□ 1.06
PDCD6-214ENST00000628729 LRRC37AA6NMS7 1700 aa21.66■■□□□ 1.06
PDCD6-214ENST00000628729 ABCC4O15439 1325 aa21.65■■□□□ 1.06
PDCD6-214ENST00000628729 RNF123Q5XPI4 1314 aa21.65■■□□□ 1.06
PDCD6-214ENST00000628729 SLC10A5Q5PT55 438 aa21.65■■□□□ 1.06
PDCD6-214ENST00000628729 ZNF428Q96B54 188 aa21.65■■□□□ 1.06
PDCD6-214ENST00000628729 RBM17Q96I25 401 aaKnown RBP21.65■■□□□ 1.06
PDCD6-214ENST00000628729 DUOX1Q9NRD9 1551 aa21.65■■□□□ 1.06
PDCD6-214ENST00000628729 TCERG1O14776 1098 aaKnown RBP21.64■■□□□ 1.05
PDCD6-214ENST00000628729 MBIPQ9NS73 344 aa21.64■■□□□ 1.05
PDCD6-214ENST00000628729 IQCA1LA6NCM1 817 aa21.63■■□□□ 1.05
PDCD6-214ENST00000628729 HCLS1P14317 486 aaPredicted RBP21.63■■□□□ 1.05
PDCD6-214ENST00000628729 HDGFL1Q5TGJ6 251 aa21.63■■□□□ 1.05
PDCD6-214ENST00000628729 CC2D2BQ6DHV5 1058 aa21.63■■□□□ 1.05
PDCD6-214ENST00000628729 CFAP44Q96MT7 982 aa21.63■■□□□ 1.05
PDCD6-214ENST00000628729 PASKQ96RG2 1323 aa21.62■■□□□ 1.05
PDCD6-214ENST00000628729 HOXB7P09629 217 aa21.62■■□□□ 1.05
PDCD6-214ENST00000628729 ZNF853P0CG23 659 aa21.62■■□□□ 1.05
PDCD6-214ENST00000628729 TCIRG1Q13488 830 aa21.62■■□□□ 1.05
PDCD6-214ENST00000628729 LDHDQ86WU2 507 aa21.62■■□□□ 1.05
PDCD6-214ENST00000628729 NLRP3Q96P20 1036 aa21.62■■□□□ 1.05
PDCD6-214ENST00000628729 APAF1O14727 1248 aa21.61■■□□□ 1.05
PDCD6-214ENST00000628729 EPHX2P34913 555 aa21.6■■□□□ 1.05
PDCD6-214ENST00000628729 HSP90AB3PQ58FF7 597 aa21.6■■□□□ 1.05
PDCD6-214ENST00000628729 DUSP27Q5VZP5 1158 aa21.6■■□□□ 1.05
PDCD6-214ENST00000628729 GPC2Q8N158 579 aa21.6■■□□□ 1.05
PDCD6-214ENST00000628729 HACL1Q9UJ83 578 aa21.6■■□□□ 1.05
PDCD6-214ENST00000628729 ATP6V0A2Q9Y487 856 aa21.6■■□□□ 1.05
PDCD6-214ENST00000628729 CCDC184Q52MB2 194 aa21.59■■□□□ 1.05
PDCD6-214ENST00000628729 EAPPQ56P03 285 aaPredicted RBP21.59■■□□□ 1.05
PDCD6-214ENST00000628729 PLBD2Q8NHP8 589 aa21.59■■□□□ 1.05
PDCD6-214ENST00000628729 TRMT112Q9UI30 125 aaKnown RBP21.59■■□□□ 1.05
PDCD6-214ENST00000628729 SH3TC1Q8TE82 1336 aa21.58■■□□□ 1.05
PDCD6-214ENST00000628729 ITGBL1O95965 494 aaPredicted RBP21.58■■□□□ 1.05
PDCD6-214ENST00000628729 AOC3Q16853 763 aa21.58■■□□□ 1.05
PDCD6-214ENST00000628729 JDP2Q8WYK2 163 aa21.58■■□□□ 1.05
PDCD6-214ENST00000628729 ISCA1Q9BUE6 129 aa21.58■■□□□ 1.05
PDCD6-214ENST00000628729 CREBZFQ9NS37 354 aa21.58■■□□□ 1.05
PDCD6-214ENST00000628729 DBF4Q9UBU7 674 aaPredicted RBP21.58■■□□□ 1.05
PDCD6-214ENST00000628729 SCNN1DP51172 638 aa21.57■■□□□ 1.04
PDCD6-214ENST00000628729 LARGE2Q8N3Y3 721 aa21.57■■□□□ 1.04
PDCD6-214ENST00000628729 ATP5J2-PTCD1G3V325 749 aa21.56■■□□□ 1.04
PDCD6-214ENST00000628729 GRIPAP1Q4V328 841 aa21.56■■□□□ 1.04
PDCD6-214ENST00000628729 IFT57Q9NWB7 429 aa21.56■■□□□ 1.04
PDCD6-214ENST00000628729 PPIP5K2O43314 1243 aa21.55■■□□□ 1.04
PDCD6-214ENST00000628729 ANKRD13DQ6ZTN6 518 aa21.55■■□□□ 1.04
PDCD6-214ENST00000628729 RTFDC1Q9BY42 306 aaPredicted RBP21.55■■□□□ 1.04
PDCD6-214ENST00000628729 MKRN1Q9UHC7 482 aaKnown RBP21.55■■□□□ 1.04
PDCD6-214ENST00000628729 GJA3Q9Y6H8 435 aa21.55■■□□□ 1.04
PDCD6-214ENST00000628729 EIF6P56537 245 aaKnown RBP21.54■■□□□ 1.04
PDCD6-214ENST00000628729 COL13A1Q5TAT6 717 aaPredicted RBP21.54■■□□□ 1.04
PDCD6-214ENST00000628729 FAM89AQ96GI7 184 aa21.54■■□□□ 1.04
PDCD6-214ENST00000628729 CNTNAP1P78357 1384 aa21.53■■□□□ 1.04
PDCD6-214ENST00000628729 HSPA1AP0DMV8 641 aaKnown RBP21.53■■□□□ 1.04
PDCD6-214ENST00000628729 HSPA1BP0DMV9 641 aaKnown RBP21.53■■□□□ 1.04
PDCD6-214ENST00000628729 EPS15P42566 896 aa21.53■■□□□ 1.04
PDCD6-214ENST00000628729 GRAPQ13588 217 aa21.53■■□□□ 1.04
PDCD6-214ENST00000628729 MAP1SQ66K74 1059 aaPredicted RBP21.53■■□□□ 1.04
PDCD6-214ENST00000628729 NIM1KQ8IY84 436 aa21.53■■□□□ 1.04
PDCD6-214ENST00000628729 GRAPLQ8TC17 118 aaPredicted RBP21.53■■□□□ 1.04
PDCD6-214ENST00000628729 PHAXQ9H814 394 aaKnown RBP21.53■■□□□ 1.04
PDCD6-214ENST00000628729 HYPKQ9NX55 129 aa21.53■■□□□ 1.04
PDCD6-214ENST00000628729 ELL2O00472 640 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms