RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 ZNF34Q8IZ26 560 aa24.97■■□□□ 1.59
SMN2-215ENST00000628696 RNF123Q5XPI4 1314 aa24.96■■□□□ 1.59
SMN2-215ENST00000628696 FZD9O00144 591 aa24.96■■□□□ 1.59
SMN2-215ENST00000628696 RIPK4P57078 832 aa24.96■■□□□ 1.59
SMN2-215ENST00000628696 PSMD1Q99460 953 aa24.96■■□□□ 1.59
SMN2-215ENST00000628696 PASKQ96RG2 1323 aa24.95■■□□□ 1.58
SMN2-215ENST00000628696 HOXA10P31260 410 aaPredicted RBP24.95■■□□□ 1.58
SMN2-215ENST00000628696 GIGYF2Q6Y7W6 1299 aaKnown RBP24.95■■□□□ 1.58
SMN2-215ENST00000628696 RBM17Q96I25 401 aaKnown RBP24.95■■□□□ 1.58
SMN2-215ENST00000628696 ERBB4Q15303 1308 aa24.94■■□□□ 1.58
SMN2-215ENST00000628696 EIF6P56537 245 aaKnown RBP24.94■■□□□ 1.58
SMN2-215ENST00000628696 PPP1R42Q7Z4L9 355 aa24.94■■□□□ 1.58
SMN2-215ENST00000628696 GJA3Q9Y6H8 435 aa24.94■■□□□ 1.58
SMN2-215ENST00000628696 IBTKQ9P2D0 1353 aaPredicted RBP24.93■■□□□ 1.58
SMN2-215ENST00000628696 NTSR2O95665 410 aa24.93■■□□□ 1.58
SMN2-215ENST00000628696 ITGBL1O95965 494 aaPredicted RBP24.93■■□□□ 1.58
SMN2-215ENST00000628696 GPC2Q8N158 579 aa24.93■■□□□ 1.58
SMN2-215ENST00000628696 TMEM88BA6NKF7 163 aa24.92■■□□□ 1.58
SMN2-215ENST00000628696 ANXA1P04083 346 aa24.92■■□□□ 1.58
SMN2-215ENST00000628696 PNMA8AQ86V59 439 aaPredicted RBP24.92■■□□□ 1.58
SMN2-215ENST00000628696 CRAMP1Q96RY5 1269 aa24.92■■□□□ 1.58
SMN2-215ENST00000628696 PPEF1O14829 653 aaPredicted RBP24.91■■□□□ 1.58
SMN2-215ENST00000628696 PARP10Q53GL7 1025 aa24.91■■□□□ 1.58
SMN2-215ENST00000628696 C3orf67Q6ZVT6 689 aa24.91■■□□□ 1.58
SMN2-215ENST00000628696 LARGE2Q8N3Y3 721 aa24.91■■□□□ 1.58
SMN2-215ENST00000628696 NECTIN2Q92692 538 aa24.91■■□□□ 1.58
SMN2-215ENST00000628696 NLRP3Q96P20 1036 aa24.91■■□□□ 1.58
SMN2-215ENST00000628696 RIC1Q4ADV7 1423 aa24.91■■□□□ 1.58
SMN2-215ENST00000628696 SNED1Q8TER0 1413 aa24.91■■□□□ 1.58
SMN2-215ENST00000628696 CNTNAP1P78357 1384 aa24.91■■□□□ 1.58
SMN2-215ENST00000628696 PDIA6Q15084 440 aa24.9■■□□□ 1.58
SMN2-215ENST00000628696 PROSER3Q2NL68 480 aa24.9■■□□□ 1.58
SMN2-215ENST00000628696 GRIPAP1Q4V328 841 aa24.9■■□□□ 1.58
SMN2-215ENST00000628696 MAP1SQ66K74 1059 aaPredicted RBP24.9■■□□□ 1.58
SMN2-215ENST00000628696 SLC51AQ86UW1 340 aa24.9■■□□□ 1.58
SMN2-215ENST00000628696 CNTROBQ8N137 903 aa24.9■■□□□ 1.58
SMN2-215ENST00000628696 UTP14AQ9BVJ6 771 aaKnown RBP24.9■■□□□ 1.58
SMN2-215ENST00000628696 TMPOP42166 694 aaKnown RBP24.89■■□□□ 1.58
SMN2-215ENST00000628696 RALBP1Q15311 655 aa24.89■■□□□ 1.58
SMN2-215ENST00000628696 TMX4Q9H1E5 349 aaPredicted RBP24.89■■□□□ 1.58
SMN2-215ENST00000628696 LMOD1P29536 600 aaPredicted RBP24.88■■□□□ 1.57
SMN2-215ENST00000628696 LMOD3Q0VAK6 560 aa24.88■■□□□ 1.57
SMN2-215ENST00000628696 AIMP1Q12904 312 aaKnown RBP24.88■■□□□ 1.57
SMN2-215ENST00000628696 NEUROD2Q15784 382 aa24.88■■□□□ 1.57
SMN2-215ENST00000628696 LRP10Q7Z4F1 713 aa24.88■■□□□ 1.57
SMN2-215ENST00000628696 COL4A5P29400 1685 aa24.88■■□□□ 1.57
SMN2-215ENST00000628696 ADAMTSL1Q8N6G6 1762 aa24.88■■□□□ 1.57
SMN2-215ENST00000628696 BABAM1Q9NWV8 329 aa24.87■■□□□ 1.57
SMN2-215ENST00000628696 VEGFBP49765 207 aa24.86■■□□□ 1.57
SMN2-215ENST00000628696 NIM1KQ8IY84 436 aa24.86■■□□□ 1.57
SMN2-215ENST00000628696 PPIP5K2O43314 1243 aa24.85■■□□□ 1.57
SMN2-215ENST00000628696 SLC10A5Q5PT55 438 aa24.85■■□□□ 1.57
SMN2-215ENST00000628696 COPS6Q7L5N1 327 aa24.85■■□□□ 1.57
SMN2-215ENST00000628696 CCDC146Q8IYE0 955 aa24.85■■□□□ 1.57
SMN2-215ENST00000628696 XAGE3Q8WTP9 111 aa24.84■■□□□ 1.57
SMN2-215ENST00000628696 LAS1LQ9Y4W2 734 aaKnown RBP24.84■■□□□ 1.57
SMN2-215ENST00000628696 FOXN1O15353 648 aa24.83■■□□□ 1.57
SMN2-215ENST00000628696 EPS15P42566 896 aa24.83■■□□□ 1.57
SMN2-215ENST00000628696 HSP90AB3PQ58FF7 597 aa24.83■■□□□ 1.57
SMN2-215ENST00000628696 AIDAQ96BJ3 306 aa24.83■■□□□ 1.57
SMN2-215ENST00000628696 ATP6V0A2Q9Y487 856 aa24.83■■□□□ 1.57
SMN2-215ENST00000628696 AOC3Q16853 763 aa24.82■■□□□ 1.56
SMN2-215ENST00000628696 ANKRD36CQ5JPF3 1778 aa24.82■■□□□ 1.56
SMN2-215ENST00000628696 ABCC4O15439 1325 aa24.82■■□□□ 1.56
SMN2-215ENST00000628696 LTBP1Q14766 1721 aa24.81■■□□□ 1.56
SMN2-215ENST00000628696 HCLS1P14317 486 aaPredicted RBP24.81■■□□□ 1.56
SMN2-215ENST00000628696 SCNN1DP51172 638 aa24.81■■□□□ 1.56
SMN2-215ENST00000628696 DDX10Q13206 875 aaKnown RBP24.81■■□□□ 1.56
SMN2-215ENST00000628696 DEFB115Q30KQ5 88 aa24.81■■□□□ 1.56
SMN2-215ENST00000628696 NLRP10Q86W26 655 aa24.81■■□□□ 1.56
SMN2-215ENST00000628696 ABT1Q9ULW3 272 aaKnown RBP24.81■■□□□ 1.56
SMN2-215ENST00000628696 KRT24Q2M2I5 525 aa24.8■■□□□ 1.56
SMN2-215ENST00000628696 ZNF428Q96B54 188 aa24.8■■□□□ 1.56
SMN2-215ENST00000628696 TRMT112Q9UI30 125 aaKnown RBP24.8■■□□□ 1.56
SMN2-215ENST00000628696 TCIRG1Q13488 830 aa24.79■■□□□ 1.56
SMN2-215ENST00000628696 SUPT20HQ8NEM7 779 aa24.79■■□□□ 1.56
SMN2-215ENST00000628696 DDX21Q9NR30 783 aaKnown RBP eCLIP24.79■■□□□ 1.56
SMN2-215ENST00000628696 LAMB2P55268 1798 aa24.79■■□□□ 1.56
SMN2-215ENST00000628696 RASSF10A6NK89 507 aa24.78■■□□□ 1.56
SMN2-215ENST00000628696 BBOX1O75936 387 aa24.78■■□□□ 1.56
SMN2-215ENST00000628696 DPP8Q6V1X1 898 aaPredicted RBP24.78■■□□□ 1.56
SMN2-215ENST00000628696 DDX46Q7L014 1031 aaKnown RBP24.78■■□□□ 1.56
SMN2-215ENST00000628696 MYBBP1AQ9BQG0 1328 aaKnown RBP24.78■■□□□ 1.56
SMN2-215ENST00000628696 CHL1O00533 1208 aa24.77■■□□□ 1.56
SMN2-215ENST00000628696 CTCFP49711 727 aaPredicted RBP24.77■■□□□ 1.56
SMN2-215ENST00000628696 FMR1Q06787 632 aaKnown RBP eCLIP24.77■■□□□ 1.56
SMN2-215ENST00000628696 WDR43Q15061 677 aaKnown RBP eCLIP24.77■■□□□ 1.56
SMN2-215ENST00000628696 USP50Q70EL3 339 aaPredicted RBP24.77■■□□□ 1.56
SMN2-215ENST00000628696 SP8Q8IXZ3 490 aa24.77■■□□□ 1.56
SMN2-215ENST00000628696 MPNDQ8N594 471 aa24.77■■□□□ 1.56
SMN2-215ENST00000628696 VPS33BQ9H267 617 aa24.77■■□□□ 1.56
SMN2-215ENST00000628696 RUNDC1Q96C34 613 aa24.76■■□□□ 1.55
SMN2-215ENST00000628696 CHPF2Q9P2E5 772 aa24.76■■□□□ 1.55
SMN2-215ENST00000628696 ZNRF3Q9ULT6 936 aa24.76■■□□□ 1.55
SMN2-215ENST00000628696 SH3TC1Q8TE82 1336 aa24.76■■□□□ 1.55
SMN2-215ENST00000628696 TAF1P21675 1872 aa24.76■■□□□ 1.55
SMN2-215ENST00000628696 CXCL9Q07325 125 aa24.75■■□□□ 1.55
SMN2-215ENST00000628696 RTFDC1Q9BY42 306 aaPredicted RBP24.75■■□□□ 1.55
SMN2-215ENST00000628696 WBP1LQ9NX94 342 aa24.75■■□□□ 1.55
SMN2-215ENST00000628696 TRIM35Q9UPQ4 493 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms