RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 MKRN1Q9UHC7 482 aaKnown RBP7.92□□□□□ -1.14
CHD2-208ENST00000626874 CAMSAP2Q08AD1 1489 aa7.92□□□□□ -1.14
CHD2-208ENST00000626874 TSPY2A6NKD2 308 aa7.92□□□□□ -1.14
CHD2-208ENST00000626874 UBA7P41226 1012 aa7.92□□□□□ -1.14
CHD2-208ENST00000626874 CEP112Q8N8E3 955 aa7.92□□□□□ -1.14
CHD2-208ENST00000626874 NUDT16Q96DE0 195 aaKnown RBP7.92□□□□□ -1.14
CHD2-208ENST00000626874 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.92□□□□□ -1.14
CHD2-208ENST00000626874 KIAA1107Q9UPP5 1409 aa7.92□□□□□ -1.14
CHD2-208ENST00000626874 IFIT3O14879 490 aaKnown RBP7.92□□□□□ -1.14
CHD2-208ENST00000626874 CCDC40Q4G0X9 1142 aa7.92□□□□□ -1.14
CHD2-208ENST00000626874 PUF60Q9UHX1 559 aaKnown RBP7.92□□□□□ -1.14
CHD2-208ENST00000626874 PDE6BP35913 854 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 ZC3H6P61129 1189 aaKnown RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 CCDC94Q9BW85 323 aaPredicted RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 PTPRCP08575 1304 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 LRRC9Q6ZRR7 1453 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 GMNNO75496 209 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 PRKCSHP14314 528 aaPredicted RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 IFNL2Q8IZJ0 200 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 DNAAF4Q8WXU2 420 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 GOLGA1Q92805 767 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 GPHNQ9NQX3 736 aaPredicted RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 HMG20BQ9P0W2 317 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 USP25Q9UHP3 1055 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 NOD1Q9Y239 953 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 CALM1P0DP23 149 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 CALM2P0DP24 149 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 CALM3P0DP25 149 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 ATP2A2P16615 1042 aaKnown RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 CKAP4Q07065 602 aaKnown RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 MFSD6Q6ZSS7 791 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 CCDC113Q9H0I3 377 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 GOPCQ9HD26 462 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 CCDC171Q6TFL3 1326 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 MAP4K4O95819 1239 aaPredicted RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 EXOSC9Q06265 439 aaKnown RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 CDAN1Q8IWY9 1227 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 AFAP1Q8N556 730 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 PANK1Q8TE04 598 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 CCDC77Q9BR77 488 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 KCNG1Q9UIX4 513 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 PRPF40AO75400 957 aaKnown RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 MTIF2P46199 727 aaKnown RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 TDRD12Q587J7 1177 aaKnown RBP7.91□□□□□ -1.14
CHD2-208ENST00000626874 NLRP3Q96P20 1036 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 SELENOOQ9BVL4 669 aa7.91□□□□□ -1.14
CHD2-208ENST00000626874 PTCD1O75127 700 aaKnown RBP7.9□□□□□ -1.14
CHD2-208ENST00000626874 CWC27Q6UX04 472 aaKnown RBP7.9□□□□□ -1.14
CHD2-208ENST00000626874 GLT8D2Q9H1C3 349 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 SPC25Q9HBM1 224 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 TROQ12816 1431 aaPredicted RBP7.9□□□□□ -1.14
CHD2-208ENST00000626874 SNAPC4Q5SXM2 1469 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 CUL7Q14999 1698 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 UQCRHLA0A096LP55 91 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 SPDYE3A6NKU9 549 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 CASQ1P31415 396 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 GSDMDP57764 484 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 ALDH1L2Q3SY69 923 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 TMCO3Q6UWJ1 677 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 UBXN4Q92575 508 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 NSD2O96028 1365 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 NPHP3Q7Z494 1330 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 SH3BP5O60239 455 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 TRAK2O60296 914 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 PPP2R1AP30153 589 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 KIAA0753Q2KHM9 967 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 SPECC1Q5M775 1068 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 CFAP70Q5T0N1 1121 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 CDCA7Q9BWT1 371 aaPredicted RBP7.9□□□□□ -1.14
CHD2-208ENST00000626874 TXNDC16Q9P2K2 825 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 ANAPC4Q9UJX5 808 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 GNAT2P19087 354 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 ARL1P40616 181 aaPredicted RBP7.9□□□□□ -1.14
CHD2-208ENST00000626874 TUBB4BP68371 445 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 MAP7D1Q3KQU3 841 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 CHD1LQ86WJ1 897 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 OTUD6BQ8N6M0 293 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 GIMAP7Q8NHV1 300 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 NUP88Q99567 741 aaPredicted RBP7.9□□□□□ -1.14
CHD2-208ENST00000626874 EXOC1Q9NV70 894 aa7.9□□□□□ -1.14
CHD2-208ENST00000626874 UBAP1LF5GYI3 381 aa7.9□□□□□ -1.15
CHD2-208ENST00000626874 CALML3P27482 149 aa7.9□□□□□ -1.15
CHD2-208ENST00000626874 TCERG1LQ5VWI1 586 aa7.9□□□□□ -1.15
CHD2-208ENST00000626874 LMBR1Q8WVP7 490 aa7.9□□□□□ -1.15
CHD2-208ENST00000626874 CTAGE1Q96RT6 745 aa7.9□□□□□ -1.15
CHD2-208ENST00000626874 PHF8Q9UPP1 1060 aa7.9□□□□□ -1.15
CHD2-208ENST00000626874 CD109Q6YHK3 1445 aa7.9□□□□□ -1.15
CHD2-208ENST00000626874 TSPY3P0CV98 308 aa7.9□□□□□ -1.15
CHD2-208ENST00000626874 TSPY8P0CW00 308 aa7.9□□□□□ -1.15
CHD2-208ENST00000626874 CCDC102AQ96A19 550 aa7.9□□□□□ -1.15
CHD2-208ENST00000626874 RIOK3O14730 519 aaKnown RBP7.89□□□□□ -1.15
CHD2-208ENST00000626874 TOP1P11387 765 aaKnown RBP7.89□□□□□ -1.15
CHD2-208ENST00000626874 PICK1Q9NRD5 415 aa7.89□□□□□ -1.15
CHD2-208ENST00000626874 PSMD1Q99460 953 aa7.89□□□□□ -1.15
CHD2-208ENST00000626874 NCAPGQ9BPX3 1015 aa7.89□□□□□ -1.15
CHD2-208ENST00000626874 RTEL1Q9NZ71 1219 aa7.89□□□□□ -1.15
CHD2-208ENST00000626874 EVI5LQ96CN4 794 aa7.89□□□□□ -1.15
CHD2-208ENST00000626874 GOLGA8AA7E2F4 631 aa7.89□□□□□ -1.15
CHD2-208ENST00000626874 GOLGA8BA8MQT2 603 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms