RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 JAK2O60674 1132 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 IFFO2Q5TF58 517 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 CREB3L3Q68CJ9 461 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 ZSCAN31Q96LW9 406 aaPredicted RBP16.41■□□□□ 0.22
UBE3A-209ENST00000625778 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
UBE3A-209ENST00000625778 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
UBE3A-209ENST00000625778 BECN2A8MW95 431 aa16.4■□□□□ 0.22
UBE3A-209ENST00000625778 OGFRQ9NZT2 677 aa16.4■□□□□ 0.22
UBE3A-209ENST00000625778 BLOC1S2Q6QNY1 142 aa16.4■□□□□ 0.22
UBE3A-209ENST00000625778 FSD1Q9BTV5 496 aa16.4■□□□□ 0.22
UBE3A-209ENST00000625778 CTIFO43310 598 aaKnown RBP16.4■□□□□ 0.22
UBE3A-209ENST00000625778 NMIQ13287 307 aaPredicted RBP16.4■□□□□ 0.22
UBE3A-209ENST00000625778 IL17REQ8NFR9 667 aa16.4■□□□□ 0.22
UBE3A-209ENST00000625778 CTNNA3Q9UI47 895 aa16.39■□□□□ 0.21
UBE3A-209ENST00000625778 ZNF215Q9UL58 517 aaPredicted RBP16.39■□□□□ 0.21
UBE3A-209ENST00000625778 LEO1Q8WVC0 666 aaPredicted RBP16.39■□□□□ 0.21
UBE3A-209ENST00000625778 EDC3Q96F86 508 aaKnown RBP16.38■□□□□ 0.21
UBE3A-209ENST00000625778 FTOQ9C0B1 505 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBE3A-209ENST00000625778 ESF1Q9H501 851 aaKnown RBP16.38■□□□□ 0.21
UBE3A-209ENST00000625778 ZSWIM6Q9HCJ5 1215 aa16.38■□□□□ 0.21
UBE3A-209ENST00000625778 ST7Q9NRC1 585 aa16.38■□□□□ 0.21
UBE3A-209ENST00000625778 ECHDC1Q9NTX5 307 aa16.38■□□□□ 0.21
UBE3A-209ENST00000625778 NDUFB9Q9Y6M9 179 aa16.38■□□□□ 0.21
UBE3A-209ENST00000625778 GORABQ5T7V8 394 aa16.38■□□□□ 0.21
UBE3A-209ENST00000625778 GPATCH3Q96I76 525 aa16.38■□□□□ 0.21
UBE3A-209ENST00000625778 CCDC171Q6TFL3 1326 aa16.38■□□□□ 0.21
UBE3A-209ENST00000625778 NLRP6P59044 892 aa16.38■□□□□ 0.21
UBE3A-209ENST00000625778 ELF2Q15723 593 aa16.38■□□□□ 0.21
UBE3A-209ENST00000625778 AOX1Q06278 1338 aa16.37■□□□□ 0.21
UBE3A-209ENST00000625778 KCNQ3O43525 872 aa16.37■□□□□ 0.21
UBE3A-209ENST00000625778 SKILP12757 684 aa16.37■□□□□ 0.21
UBE3A-209ENST00000625778 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
UBE3A-209ENST00000625778 PTPN14Q15678 1187 aa16.37■□□□□ 0.21
UBE3A-209ENST00000625778 FMNL2Q96PY5 1086 aa16.37■□□□□ 0.21
UBE3A-209ENST00000625778 FEZ1Q99689 392 aa16.37■□□□□ 0.21
UBE3A-209ENST00000625778 PPP6R1Q9UPN7 881 aa16.37■□□□□ 0.21
UBE3A-209ENST00000625778 GUCY1B3Q02153 619 aa16.37■□□□□ 0.21
UBE3A-209ENST00000625778 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
UBE3A-209ENST00000625778 PDCP20941 246 aa16.36■□□□□ 0.21
UBE3A-209ENST00000625778 SLC26A8Q96RN1 970 aa16.36■□□□□ 0.21
UBE3A-209ENST00000625778 SCAND2PQ9GZW5 306 aaPredicted RBP16.36■□□□□ 0.21
UBE3A-209ENST00000625778 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
UBE3A-209ENST00000625778 C11orf57Q6ZUT1 292 aaPredicted RBP16.36■□□□□ 0.21
UBE3A-209ENST00000625778 KLHDC4Q8TBB5 520 aa16.36■□□□□ 0.21
UBE3A-209ENST00000625778 SLC27A2O14975 620 aa16.36■□□□□ 0.21
UBE3A-209ENST00000625778 BRF1Q92994 677 aa16.36■□□□□ 0.21
UBE3A-209ENST00000625778 PGBD1Q96JS3 809 aa16.36■□□□□ 0.21
UBE3A-209ENST00000625778 CLSTN2Q9H4D0 955 aa16.36■□□□□ 0.21
UBE3A-209ENST00000625778 DDX19AQ9NUU7 478 aaKnown RBP16.36■□□□□ 0.21
UBE3A-209ENST00000625778 A0A0D9SFI3 127 aa16.35■□□□□ 0.21
UBE3A-209ENST00000625778 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
UBE3A-209ENST00000625778 TLR7Q9NYK1 1049 aaKnown RBP16.35■□□□□ 0.21
UBE3A-209ENST00000625778 TMX1Q9H3N1 280 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 NPHP3Q7Z494 1330 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 CCDC69A6NI79 296 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 PSMA5P28066 241 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 IRX5P78411 483 aaPredicted RBP16.34■□□□□ 0.21
UBE3A-209ENST00000625778 POLA2Q14181 598 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 HSP90AB4PQ58FF6 505 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 TMEM131LA2VDJ0 1609 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 CHGBP05060 677 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 KMT5BQ4FZB7 885 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 PLA2G4DQ86XP0 818 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 PAXBP1Q9Y5B6 917 aa16.34■□□□□ 0.21
UBE3A-209ENST00000625778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.34■□□□□ 0.21
UBE3A-209ENST00000625778 NECTIN1Q15223 517 aa16.33■□□□□ 0.21
UBE3A-209ENST00000625778 CLTCQ00610 1675 aaKnown RBP16.33■□□□□ 0.2
UBE3A-209ENST00000625778 KIF18AQ8NI77 898 aa16.33■□□□□ 0.2
UBE3A-209ENST00000625778 LGR6Q9HBX8 967 aa16.33■□□□□ 0.2
UBE3A-209ENST00000625778 DDX41Q9UJV9 622 aaKnown RBP16.33■□□□□ 0.2
UBE3A-209ENST00000625778 LRRC8AQ8IWT6 810 aa16.32■□□□□ 0.2
UBE3A-209ENST00000625778 TNNT3P45378 269 aaPredicted RBP16.32■□□□□ 0.2
UBE3A-209ENST00000625778 RNF20Q5VTR2 975 aa16.32■□□□□ 0.2
UBE3A-209ENST00000625778 ZNF589Q86UQ0 364 aaPredicted RBP16.32■□□□□ 0.2
UBE3A-209ENST00000625778 GTF3C6Q969F1 213 aa16.32■□□□□ 0.2
UBE3A-209ENST00000625778 EVI5LQ96CN4 794 aa16.32■□□□□ 0.2
UBE3A-209ENST00000625778 RIMS1Q86UR5 1692 aaKnown RBP16.32■□□□□ 0.2
UBE3A-209ENST00000625778 G3BP1Q13283 466 aaKnown RBP eCLIP16.32■□□□□ 0.2
UBE3A-209ENST00000625778 FBXO38Q6PIJ6 1188 aa16.32■□□□□ 0.2
UBE3A-209ENST00000625778 CCDC129Q6ZRS4 1044 aa16.32■□□□□ 0.2
UBE3A-209ENST00000625778 KRT222Q8N1A0 295 aa16.32■□□□□ 0.2
UBE3A-209ENST00000625778 TDRD7Q8NHU6 1098 aaKnown RBP16.32■□□□□ 0.2
UBE3A-209ENST00000625778 CCAR1Q8IX12 1150 aaKnown RBP16.31■□□□□ 0.2
UBE3A-209ENST00000625778 MAP3K2Q9Y2U5 619 aa16.31■□□□□ 0.2
UBE3A-209ENST00000625778 SMC2O95347 1197 aa16.31■□□□□ 0.2
UBE3A-209ENST00000625778 BEND3Q5T5X7 828 aa16.31■□□□□ 0.2
UBE3A-209ENST00000625778 AOPEPQ8N6M6 819 aa16.31■□□□□ 0.2
UBE3A-209ENST00000625778 IL17RAQ96F46 866 aa16.31■□□□□ 0.2
UBE3A-209ENST00000625778 CCT2P78371 535 aaKnown RBP16.3■□□□□ 0.2
UBE3A-209ENST00000625778 BIN1O00499 593 aa16.3■□□□□ 0.2
UBE3A-209ENST00000625778 ME1P48163 572 aa16.3■□□□□ 0.2
UBE3A-209ENST00000625778 ZRSR1Q15695 479 aaKnown RBP16.3■□□□□ 0.2
UBE3A-209ENST00000625778 ISM2Q6H9L7 571 aa16.3■□□□□ 0.2
UBE3A-209ENST00000625778 EAF2Q96CJ1 260 aaPredicted RBP16.3■□□□□ 0.2
UBE3A-209ENST00000625778 DNAJC2Q99543 621 aaKnown RBP16.3■□□□□ 0.2
UBE3A-209ENST00000625778 TTC41PQ6P2S7 1318 aa16.3■□□□□ 0.2
UBE3A-209ENST00000625778 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
UBE3A-209ENST00000625778 TEFQ10587 303 aa16.3■□□□□ 0.2
UBE3A-209ENST00000625778 TOB2Q14106 344 aaPredicted RBP16.3■□□□□ 0.2
UBE3A-209ENST00000625778 CCDC73Q6ZRK6 1079 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms