RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 ZNF34Q8IZ26 560 aa24.97■■□□□ 1.59
SMN1-211ENST00000625245 RNF123Q5XPI4 1314 aa24.96■■□□□ 1.59
SMN1-211ENST00000625245 FZD9O00144 591 aa24.96■■□□□ 1.59
SMN1-211ENST00000625245 RIPK4P57078 832 aa24.96■■□□□ 1.59
SMN1-211ENST00000625245 PSMD1Q99460 953 aa24.96■■□□□ 1.59
SMN1-211ENST00000625245 PASKQ96RG2 1323 aa24.95■■□□□ 1.58
SMN1-211ENST00000625245 HOXA10P31260 410 aaPredicted RBP24.95■■□□□ 1.58
SMN1-211ENST00000625245 GIGYF2Q6Y7W6 1299 aaKnown RBP24.95■■□□□ 1.58
SMN1-211ENST00000625245 RBM17Q96I25 401 aaKnown RBP24.95■■□□□ 1.58
SMN1-211ENST00000625245 ERBB4Q15303 1308 aa24.94■■□□□ 1.58
SMN1-211ENST00000625245 EIF6P56537 245 aaKnown RBP24.94■■□□□ 1.58
SMN1-211ENST00000625245 PPP1R42Q7Z4L9 355 aa24.94■■□□□ 1.58
SMN1-211ENST00000625245 GJA3Q9Y6H8 435 aa24.94■■□□□ 1.58
SMN1-211ENST00000625245 IBTKQ9P2D0 1353 aaPredicted RBP24.93■■□□□ 1.58
SMN1-211ENST00000625245 NTSR2O95665 410 aa24.93■■□□□ 1.58
SMN1-211ENST00000625245 ITGBL1O95965 494 aaPredicted RBP24.93■■□□□ 1.58
SMN1-211ENST00000625245 GPC2Q8N158 579 aa24.93■■□□□ 1.58
SMN1-211ENST00000625245 TMEM88BA6NKF7 163 aa24.92■■□□□ 1.58
SMN1-211ENST00000625245 ANXA1P04083 346 aa24.92■■□□□ 1.58
SMN1-211ENST00000625245 PNMA8AQ86V59 439 aaPredicted RBP24.92■■□□□ 1.58
SMN1-211ENST00000625245 CRAMP1Q96RY5 1269 aa24.92■■□□□ 1.58
SMN1-211ENST00000625245 PPEF1O14829 653 aaPredicted RBP24.91■■□□□ 1.58
SMN1-211ENST00000625245 PARP10Q53GL7 1025 aa24.91■■□□□ 1.58
SMN1-211ENST00000625245 C3orf67Q6ZVT6 689 aa24.91■■□□□ 1.58
SMN1-211ENST00000625245 LARGE2Q8N3Y3 721 aa24.91■■□□□ 1.58
SMN1-211ENST00000625245 NECTIN2Q92692 538 aa24.91■■□□□ 1.58
SMN1-211ENST00000625245 NLRP3Q96P20 1036 aa24.91■■□□□ 1.58
SMN1-211ENST00000625245 RIC1Q4ADV7 1423 aa24.91■■□□□ 1.58
SMN1-211ENST00000625245 SNED1Q8TER0 1413 aa24.91■■□□□ 1.58
SMN1-211ENST00000625245 CNTNAP1P78357 1384 aa24.91■■□□□ 1.58
SMN1-211ENST00000625245 PDIA6Q15084 440 aa24.9■■□□□ 1.58
SMN1-211ENST00000625245 PROSER3Q2NL68 480 aa24.9■■□□□ 1.58
SMN1-211ENST00000625245 GRIPAP1Q4V328 841 aa24.9■■□□□ 1.58
SMN1-211ENST00000625245 MAP1SQ66K74 1059 aaPredicted RBP24.9■■□□□ 1.58
SMN1-211ENST00000625245 SLC51AQ86UW1 340 aa24.9■■□□□ 1.58
SMN1-211ENST00000625245 CNTROBQ8N137 903 aa24.9■■□□□ 1.58
SMN1-211ENST00000625245 UTP14AQ9BVJ6 771 aaKnown RBP24.9■■□□□ 1.58
SMN1-211ENST00000625245 TMPOP42166 694 aaKnown RBP24.89■■□□□ 1.58
SMN1-211ENST00000625245 RALBP1Q15311 655 aa24.89■■□□□ 1.58
SMN1-211ENST00000625245 TMX4Q9H1E5 349 aaPredicted RBP24.89■■□□□ 1.58
SMN1-211ENST00000625245 LMOD1P29536 600 aaPredicted RBP24.88■■□□□ 1.57
SMN1-211ENST00000625245 LMOD3Q0VAK6 560 aa24.88■■□□□ 1.57
SMN1-211ENST00000625245 AIMP1Q12904 312 aaKnown RBP24.88■■□□□ 1.57
SMN1-211ENST00000625245 NEUROD2Q15784 382 aa24.88■■□□□ 1.57
SMN1-211ENST00000625245 LRP10Q7Z4F1 713 aa24.88■■□□□ 1.57
SMN1-211ENST00000625245 COL4A5P29400 1685 aa24.88■■□□□ 1.57
SMN1-211ENST00000625245 ADAMTSL1Q8N6G6 1762 aa24.88■■□□□ 1.57
SMN1-211ENST00000625245 BABAM1Q9NWV8 329 aa24.87■■□□□ 1.57
SMN1-211ENST00000625245 VEGFBP49765 207 aa24.86■■□□□ 1.57
SMN1-211ENST00000625245 NIM1KQ8IY84 436 aa24.86■■□□□ 1.57
SMN1-211ENST00000625245 PPIP5K2O43314 1243 aa24.85■■□□□ 1.57
SMN1-211ENST00000625245 SLC10A5Q5PT55 438 aa24.85■■□□□ 1.57
SMN1-211ENST00000625245 COPS6Q7L5N1 327 aa24.85■■□□□ 1.57
SMN1-211ENST00000625245 CCDC146Q8IYE0 955 aa24.85■■□□□ 1.57
SMN1-211ENST00000625245 XAGE3Q8WTP9 111 aa24.84■■□□□ 1.57
SMN1-211ENST00000625245 LAS1LQ9Y4W2 734 aaKnown RBP24.84■■□□□ 1.57
SMN1-211ENST00000625245 FOXN1O15353 648 aa24.83■■□□□ 1.57
SMN1-211ENST00000625245 EPS15P42566 896 aa24.83■■□□□ 1.57
SMN1-211ENST00000625245 HSP90AB3PQ58FF7 597 aa24.83■■□□□ 1.57
SMN1-211ENST00000625245 AIDAQ96BJ3 306 aa24.83■■□□□ 1.57
SMN1-211ENST00000625245 ATP6V0A2Q9Y487 856 aa24.83■■□□□ 1.57
SMN1-211ENST00000625245 AOC3Q16853 763 aa24.82■■□□□ 1.56
SMN1-211ENST00000625245 ANKRD36CQ5JPF3 1778 aa24.82■■□□□ 1.56
SMN1-211ENST00000625245 ABCC4O15439 1325 aa24.82■■□□□ 1.56
SMN1-211ENST00000625245 LTBP1Q14766 1721 aa24.81■■□□□ 1.56
SMN1-211ENST00000625245 HCLS1P14317 486 aaPredicted RBP24.81■■□□□ 1.56
SMN1-211ENST00000625245 SCNN1DP51172 638 aa24.81■■□□□ 1.56
SMN1-211ENST00000625245 DDX10Q13206 875 aaKnown RBP24.81■■□□□ 1.56
SMN1-211ENST00000625245 DEFB115Q30KQ5 88 aa24.81■■□□□ 1.56
SMN1-211ENST00000625245 NLRP10Q86W26 655 aa24.81■■□□□ 1.56
SMN1-211ENST00000625245 ABT1Q9ULW3 272 aaKnown RBP24.81■■□□□ 1.56
SMN1-211ENST00000625245 KRT24Q2M2I5 525 aa24.8■■□□□ 1.56
SMN1-211ENST00000625245 ZNF428Q96B54 188 aa24.8■■□□□ 1.56
SMN1-211ENST00000625245 TRMT112Q9UI30 125 aaKnown RBP24.8■■□□□ 1.56
SMN1-211ENST00000625245 TCIRG1Q13488 830 aa24.79■■□□□ 1.56
SMN1-211ENST00000625245 SUPT20HQ8NEM7 779 aa24.79■■□□□ 1.56
SMN1-211ENST00000625245 DDX21Q9NR30 783 aaKnown RBP eCLIP24.79■■□□□ 1.56
SMN1-211ENST00000625245 LAMB2P55268 1798 aa24.79■■□□□ 1.56
SMN1-211ENST00000625245 RASSF10A6NK89 507 aa24.78■■□□□ 1.56
SMN1-211ENST00000625245 BBOX1O75936 387 aa24.78■■□□□ 1.56
SMN1-211ENST00000625245 DPP8Q6V1X1 898 aaPredicted RBP24.78■■□□□ 1.56
SMN1-211ENST00000625245 DDX46Q7L014 1031 aaKnown RBP24.78■■□□□ 1.56
SMN1-211ENST00000625245 MYBBP1AQ9BQG0 1328 aaKnown RBP24.78■■□□□ 1.56
SMN1-211ENST00000625245 CHL1O00533 1208 aa24.77■■□□□ 1.56
SMN1-211ENST00000625245 CTCFP49711 727 aaPredicted RBP24.77■■□□□ 1.56
SMN1-211ENST00000625245 FMR1Q06787 632 aaKnown RBP eCLIP24.77■■□□□ 1.56
SMN1-211ENST00000625245 WDR43Q15061 677 aaKnown RBP eCLIP24.77■■□□□ 1.56
SMN1-211ENST00000625245 USP50Q70EL3 339 aaPredicted RBP24.77■■□□□ 1.56
SMN1-211ENST00000625245 SP8Q8IXZ3 490 aa24.77■■□□□ 1.56
SMN1-211ENST00000625245 MPNDQ8N594 471 aa24.77■■□□□ 1.56
SMN1-211ENST00000625245 VPS33BQ9H267 617 aa24.77■■□□□ 1.56
SMN1-211ENST00000625245 RUNDC1Q96C34 613 aa24.76■■□□□ 1.55
SMN1-211ENST00000625245 CHPF2Q9P2E5 772 aa24.76■■□□□ 1.55
SMN1-211ENST00000625245 ZNRF3Q9ULT6 936 aa24.76■■□□□ 1.55
SMN1-211ENST00000625245 SH3TC1Q8TE82 1336 aa24.76■■□□□ 1.55
SMN1-211ENST00000625245 TAF1P21675 1872 aa24.76■■□□□ 1.55
SMN1-211ENST00000625245 CXCL9Q07325 125 aa24.75■■□□□ 1.55
SMN1-211ENST00000625245 RTFDC1Q9BY42 306 aaPredicted RBP24.75■■□□□ 1.55
SMN1-211ENST00000625245 WBP1LQ9NX94 342 aa24.75■■□□□ 1.55
SMN1-211ENST00000625245 TRIM35Q9UPQ4 493 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms