RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 ITGBL1O95965 494 aaPredicted RBP14.53□□□□□ -0.08
LINC00963-214ENST00000622680 EPHX2P34913 555 aa14.53□□□□□ -0.08
LINC00963-214ENST00000622680 CRY2Q49AN0 593 aa14.53□□□□□ -0.08
LINC00963-214ENST00000622680 CLEC11AQ9Y240 323 aa14.53□□□□□ -0.08
LINC00963-214ENST00000622680 FZD9O00144 591 aa14.52□□□□□ -0.09
LINC00963-214ENST00000622680 ALDH1B1P30837 517 aa14.52□□□□□ -0.09
LINC00963-214ENST00000622680 EIF4A1P60842 406 aaKnown RBP14.52□□□□□ -0.09
LINC00963-214ENST00000622680 MAP1SQ66K74 1059 aaPredicted RBP14.52□□□□□ -0.09
LINC00963-214ENST00000622680 KIF6Q6ZMV9 814 aa14.52□□□□□ -0.09
LINC00963-214ENST00000622680 NYXQ9GZU5 481 aa14.52□□□□□ -0.09
LINC00963-214ENST00000622680 TMEM88BA6NKF7 163 aa14.51□□□□□ -0.09
LINC00963-214ENST00000622680 TCERG1O14776 1098 aaKnown RBP14.51□□□□□ -0.09
LINC00963-214ENST00000622680 VEGFBP49765 207 aa14.51□□□□□ -0.09
LINC00963-214ENST00000622680 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
LINC00963-214ENST00000622680 RPGRQ92834 1020 aaKnown RBP14.51□□□□□ -0.09
LINC00963-214ENST00000622680 PLEKHF1Q96S99 279 aa14.51□□□□□ -0.09
LINC00963-214ENST00000622680 PSMD1Q99460 953 aa14.51□□□□□ -0.09
LINC00963-214ENST00000622680 PSME4Q14997 1843 aa14.5□□□□□ -0.09
LINC00963-214ENST00000622680 ERVV-1B6SEH8 477 aa14.5□□□□□ -0.09
LINC00963-214ENST00000622680 NTSR2O95665 410 aa14.5□□□□□ -0.09
LINC00963-214ENST00000622680 NEFMP07197 916 aa14.5□□□□□ -0.09
LINC00963-214ENST00000622680 NFE2L2Q16236 605 aa14.5□□□□□ -0.09
LINC00963-214ENST00000622680 SUSD4Q5VX71 490 aa14.5□□□□□ -0.09
LINC00963-214ENST00000622680 GPC2Q8N158 579 aa14.5□□□□□ -0.09
LINC00963-214ENST00000622680 PNISRQ8TF01 805 aaKnown RBP14.5□□□□□ -0.09
LINC00963-214ENST00000622680 GJA3Q9Y6H8 435 aa14.5□□□□□ -0.09
LINC00963-214ENST00000622680 COL4A1P02462 1669 aa14.49□□□□□ -0.09
LINC00963-214ENST00000622680 SCN9AQ15858 1988 aa14.49□□□□□ -0.09
LINC00963-214ENST00000622680 MYH3P11055 1940 aa14.49□□□□□ -0.09
LINC00963-214ENST00000622680 DUOX1Q9NRD9 1551 aa14.49□□□□□ -0.09
LINC00963-214ENST00000622680 JDP2Q8WYK2 163 aa14.49□□□□□ -0.09
LINC00963-214ENST00000622680 MAPK8IP3Q9UPT6 1336 aa14.48□□□□□ -0.09
LINC00963-214ENST00000622680 PPEF1O14829 653 aaPredicted RBP14.48□□□□□ -0.09
LINC00963-214ENST00000622680 ANXA1P04083 346 aa14.48□□□□□ -0.09
LINC00963-214ENST00000622680 FMR1Q06787 632 aaKnown RBP eCLIP14.48□□□□□ -0.09
LINC00963-214ENST00000622680 ZNF34Q8IZ26 560 aa14.48□□□□□ -0.09
LINC00963-214ENST00000622680 CNTROBQ8N137 903 aa14.48□□□□□ -0.09
LINC00963-214ENST00000622680 AKAP11Q9UKA4 1901 aa14.48□□□□□ -0.09
LINC00963-214ENST00000622680 HOXA10P31260 410 aaPredicted RBP14.47□□□□□ -0.09
LINC00963-214ENST00000622680 SCNN1DP51172 638 aa14.47□□□□□ -0.09
LINC00963-214ENST00000622680 EIF6P56537 245 aaKnown RBP14.47□□□□□ -0.09
LINC00963-214ENST00000622680 PROSER3Q2NL68 480 aa14.47□□□□□ -0.09
LINC00963-214ENST00000622680 PNMA8AQ86V59 439 aaPredicted RBP14.47□□□□□ -0.09
LINC00963-214ENST00000622680 LARGE2Q8N3Y3 721 aa14.47□□□□□ -0.09
LINC00963-214ENST00000622680 EPS15P42566 896 aa14.46□□□□□ -0.09
LINC00963-214ENST00000622680 GIGYF2Q6Y7W6 1299 aaKnown RBP14.46□□□□□ -0.09
LINC00963-214ENST00000622680 AIDAQ96BJ3 306 aa14.46□□□□□ -0.09
LINC00963-214ENST00000622680 RBM17Q96I25 401 aaKnown RBP14.46□□□□□ -0.09
LINC00963-214ENST00000622680 TSPYL4Q9UJ04 414 aa14.46□□□□□ -0.09
LINC00963-214ENST00000622680 ERBB4Q15303 1308 aa14.45□□□□□ -0.1
LINC00963-214ENST00000622680 RASSF10A6NK89 507 aa14.45□□□□□ -0.1
LINC00963-214ENST00000622680 EIF2S2P20042 333 aaKnown RBP14.45□□□□□ -0.1
LINC00963-214ENST00000622680 LMOD1P29536 600 aaPredicted RBP14.45□□□□□ -0.1
LINC00963-214ENST00000622680 AOC3Q16853 763 aa14.45□□□□□ -0.1
LINC00963-214ENST00000622680 CC2D2BQ6DHV5 1058 aa14.45□□□□□ -0.1
LINC00963-214ENST00000622680 LRP10Q7Z4F1 713 aa14.45□□□□□ -0.1
LINC00963-214ENST00000622680 CRAMP1Q96RY5 1269 aa14.45□□□□□ -0.1
LINC00963-214ENST00000622680 ABT1Q9ULW3 272 aaKnown RBP14.45□□□□□ -0.1
LINC00963-214ENST00000622680 ABCC4O15439 1325 aa14.44□□□□□ -0.1
LINC00963-214ENST00000622680 PPIP5K2O43314 1243 aa14.44□□□□□ -0.1
LINC00963-214ENST00000622680 CTCFP49711 727 aaPredicted RBP14.44□□□□□ -0.1
LINC00963-214ENST00000622680 LBX1P52954 281 aa14.44□□□□□ -0.1
LINC00963-214ENST00000622680 PDIA6Q15084 440 aa14.44□□□□□ -0.1
LINC00963-214ENST00000622680 NECTIN2Q92692 538 aa14.44□□□□□ -0.1
LINC00963-214ENST00000622680 PRDM10Q9NQV6 1147 aa14.44□□□□□ -0.1
LINC00963-214ENST00000622680 WBP1LQ9NX94 342 aa14.44□□□□□ -0.1
LINC00963-214ENST00000622680 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
LINC00963-214ENST00000622680 TRAF5O00463 557 aa14.43□□□□□ -0.1
LINC00963-214ENST00000622680 DEFB115Q30KQ5 88 aa14.43□□□□□ -0.1
LINC00963-214ENST00000622680 PPP1R42Q7Z4L9 355 aa14.43□□□□□ -0.1
LINC00963-214ENST00000622680 NIM1KQ8IY84 436 aa14.43□□□□□ -0.1
LINC00963-214ENST00000622680 ZNF428Q96B54 188 aa14.43□□□□□ -0.1
LINC00963-214ENST00000622680 DDX21Q9NR30 783 aaKnown RBP eCLIP14.43□□□□□ -0.1
LINC00963-214ENST00000622680 HSPA8P11142 646 aaKnown RBP14.42□□□□□ -0.1
LINC00963-214ENST00000622680 GRM1Q13255 1194 aa14.42□□□□□ -0.1
LINC00963-214ENST00000622680 PARP10Q53GL7 1025 aa14.42□□□□□ -0.1
LINC00963-214ENST00000622680 PAXIP1Q6ZW49 1069 aaPredicted RBP14.42□□□□□ -0.1
LINC00963-214ENST00000622680 UTP14AQ9BVJ6 771 aaKnown RBP14.42□□□□□ -0.1
LINC00963-214ENST00000622680 ZNF646O15015 1829 aaPredicted RBP14.42□□□□□ -0.1
LINC00963-214ENST00000622680 RIPK4P57078 832 aa14.41□□□□□ -0.1
LINC00963-214ENST00000622680 NLRP3Q96P20 1036 aa14.41□□□□□ -0.1
LINC00963-214ENST00000622680 ATP6V0A2Q9Y487 856 aa14.41□□□□□ -0.1
LINC00963-214ENST00000622680 TNRC18O15417 2968 aaPredicted RBP14.4□□□□□ -0.1
LINC00963-214ENST00000622680 HCLS1P14317 486 aaPredicted RBP14.4□□□□□ -0.1
LINC00963-214ENST00000622680 AIMP1Q12904 312 aaKnown RBP14.4□□□□□ -0.1
LINC00963-214ENST00000622680 KRT24Q2M2I5 525 aa14.4□□□□□ -0.1
LINC00963-214ENST00000622680 GRIPAP1Q4V328 841 aa14.4□□□□□ -0.1
LINC00963-214ENST00000622680 XAGE3Q8WTP9 111 aa14.4□□□□□ -0.1
LINC00963-214ENST00000622680 GMPSP49915 693 aaPredicted RBP14.39□□□□□ -0.11
LINC00963-214ENST00000622680 CXCL9Q07325 125 aa14.39□□□□□ -0.11
LINC00963-214ENST00000622680 CYP4F22Q6NT55 531 aa14.39□□□□□ -0.11
LINC00963-214ENST00000622680 USP50Q70EL3 339 aaPredicted RBP14.39□□□□□ -0.11
LINC00963-214ENST00000622680 CAPNS2Q96L46 248 aa14.39□□□□□ -0.11
LINC00963-214ENST00000622680 PNNQ9H307 717 aaKnown RBP14.39□□□□□ -0.11
LINC00963-214ENST00000622680 GPRC5DQ9NZD1 345 aa14.39□□□□□ -0.11
LINC00963-214ENST00000622680 TMPOP42166 694 aaKnown RBP14.38□□□□□ -0.11
LINC00963-214ENST00000622680 SLC10A5Q5PT55 438 aa14.38□□□□□ -0.11
LINC00963-214ENST00000622680 CST9Q5W186 159 aa14.38□□□□□ -0.11
LINC00963-214ENST00000622680 COPS6Q7L5N1 327 aa14.38□□□□□ -0.11
LINC00963-214ENST00000622680 NLRP10Q86W26 655 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms