RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 DDRGK1Q96HY6 314 aa26.39■■□□□ 1.82
SPAST-204ENST00000621856 COL5A3P25940 1745 aaPredicted RBP26.39■■□□□ 1.81
SPAST-204ENST00000621856 NUP98P52948 1817 aa26.39■■□□□ 1.81
SPAST-204ENST00000621856 EIF5P55010 431 aaKnown RBP26.39■■□□□ 1.81
SPAST-204ENST00000621856 TSHZ3Q63HK5 1081 aa26.39■■□□□ 1.81
SPAST-204ENST00000621856 TBC1D9Q6ZT07 1266 aa26.39■■□□□ 1.81
SPAST-204ENST00000621856 STAP2Q9UGK3 403 aa26.39■■□□□ 1.81
SPAST-204ENST00000621856 TBC1D2BQ9UPU7 963 aa26.39■■□□□ 1.81
SPAST-204ENST00000621856 ERVV-1B6SEH8 477 aa26.38■■□□□ 1.81
SPAST-204ENST00000621856 SDSP20132 328 aa26.38■■□□□ 1.81
SPAST-204ENST00000621856 LMBR1LQ6UX01 489 aa26.38■■□□□ 1.81
SPAST-204ENST00000621856 SIL1Q9H173 461 aa26.38■■□□□ 1.81
SPAST-204ENST00000621856 AOX1Q06278 1338 aa26.37■■□□□ 1.81
SPAST-204ENST00000621856 FOXO4P98177 505 aa26.37■■□□□ 1.81
SPAST-204ENST00000621856 PTF1AQ7RTS3 328 aa26.37■■□□□ 1.81
SPAST-204ENST00000621856 CLASRPQ8N2M8 674 aaKnown RBP26.37■■□□□ 1.81
SPAST-204ENST00000621856 CHMP3Q9Y3E7 222 aa26.37■■□□□ 1.81
SPAST-204ENST00000621856 MYH14Q7Z406 1995 aaKnown RBP26.37■■□□□ 1.81
SPAST-204ENST00000621856 GPTP24298 496 aa26.36■■□□□ 1.81
SPAST-204ENST00000621856 KLHDC4Q8TBB5 520 aa26.36■■□□□ 1.81
SPAST-204ENST00000621856 MSH5O43196 834 aa26.36■■□□□ 1.81
SPAST-204ENST00000621856 TBC1D32Q96NH3 1257 aa26.36■■□□□ 1.81
SPAST-204ENST00000621856 PCCAP05165 728 aaPredicted RBP26.35■■□□□ 1.81
SPAST-204ENST00000621856 RFX5P48382 616 aaPredicted RBP26.35■■□□□ 1.81
SPAST-204ENST00000621856 COPRSQ9NQ92 184 aa26.35■■□□□ 1.81
SPAST-204ENST00000621856 TUBGCP6Q96RT7 1819 aa26.35■■□□□ 1.81
SPAST-204ENST00000621856 SBF2Q86WG5 1849 aa26.34■■□□□ 1.81
SPAST-204ENST00000621856 CASC1Q6TDU7 716 aa26.34■■□□□ 1.81
SPAST-204ENST00000621856 NLRP10Q86W26 655 aa26.34■■□□□ 1.81
SPAST-204ENST00000621856 ZBTB38Q8NAP3 1195 aaPredicted RBP26.34■■□□□ 1.81
SPAST-204ENST00000621856 SASH1O94885 1247 aa26.33■■□□□ 1.81
SPAST-204ENST00000621856 PTPN12Q05209 780 aaKnown RBP26.33■■□□□ 1.81
SPAST-204ENST00000621856 LINC00116Q8NCU8 138 aa26.33■■□□□ 1.81
SPAST-204ENST00000621856 EIF5BO60841 1220 aaKnown RBP26.32■■□□□ 1.8
SPAST-204ENST00000621856 C22orf23Q9BZE7 217 aa26.32■■□□□ 1.8
SPAST-204ENST00000621856 IFIT2P09913 472 aaKnown RBP26.31■■□□□ 1.8
SPAST-204ENST00000621856 FAM89AQ96GI7 184 aa26.31■■□□□ 1.8
SPAST-204ENST00000621856 AACSQ86V21 672 aa26.31■■□□□ 1.8
SPAST-204ENST00000621856 TRIM6-TRIM34B2RNG4 842 aa26.3■■□□□ 1.8
SPAST-204ENST00000621856 GPATCH3Q96I76 525 aa26.3■■□□□ 1.8
SPAST-204ENST00000621856 KCNQ4P56696 695 aa26.29■■□□□ 1.8
SPAST-204ENST00000621856 RILPL2Q969X0 211 aa26.28■■□□□ 1.8
SPAST-204ENST00000621856 TTC41PQ6P2S7 1318 aa26.28■■□□□ 1.8
SPAST-204ENST00000621856 CDHR2Q9BYE9 1310 aa26.28■■□□□ 1.8
SPAST-204ENST00000621856 USP42Q9H9J4 1324 aaKnown RBP26.28■■□□□ 1.8
SPAST-204ENST00000621856 CAMTA2O94983 1202 aa26.28■■□□□ 1.8
SPAST-204ENST00000621856 ZNF34Q8IZ26 560 aa26.28■■□□□ 1.8
SPAST-204ENST00000621856 PI4K2BQ8TCG2 481 aa26.28■■□□□ 1.8
SPAST-204ENST00000621856 PLA2G12BQ9BX93 195 aa26.28■■□□□ 1.8
SPAST-204ENST00000621856 TRMT112Q9UI30 125 aaKnown RBP26.28■■□□□ 1.8
SPAST-204ENST00000621856 CNTNAP4Q9C0A0 1308 aa26.27■■□□□ 1.8
SPAST-204ENST00000621856 CCNL1Q9UK58 526 aaPredicted RBP26.26■■□□□ 1.79
SPAST-204ENST00000621856 AK9Q5TCS8 1911 aa26.26■■□□□ 1.79
SPAST-204ENST00000621856 ERC2O15083 957 aa26.25■■□□□ 1.79
SPAST-204ENST00000621856 EAF2Q96CJ1 260 aaPredicted RBP26.25■■□□□ 1.79
SPAST-204ENST00000621856 ECHDC1Q9NTX5 307 aa26.25■■□□□ 1.79
SPAST-204ENST00000621856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.25■■□□□ 1.79
SPAST-204ENST00000621856 BRWD3Q6RI45 1802 aa26.25■■□□□ 1.79
SPAST-204ENST00000621856 UBN2Q6ZU65 1347 aa26.25■■□□□ 1.79
SPAST-204ENST00000621856 LY75O60449 1722 aa26.25■■□□□ 1.79
SPAST-204ENST00000621856 ERICH6Q7L0X2 663 aa26.25■■□□□ 1.79
SPAST-204ENST00000621856 BCORQ6W2J9 1755 aa26.24■■□□□ 1.79
SPAST-204ENST00000621856 GLRX3O76003 335 aaKnown RBP26.24■■□□□ 1.79
SPAST-204ENST00000621856 TFCP2Q12800 502 aa26.24■■□□□ 1.79
SPAST-204ENST00000621856 SYNE4Q8N205 404 aa26.24■■□□□ 1.79
SPAST-204ENST00000621856 CCDC8Q9H0W5 538 aaPredicted RBP26.24■■□□□ 1.79
SPAST-204ENST00000621856 IRS4O14654 1257 aaPredicted RBP26.23■■□□□ 1.79
SPAST-204ENST00000621856 CCDC57Q2TAC2 916 aa26.23■■□□□ 1.79
SPAST-204ENST00000621856 DAXXQ9UER7 740 aaPredicted RBP26.23■■□□□ 1.79
SPAST-204ENST00000621856 ZNF652Q9Y2D9 606 aa26.23■■□□□ 1.79
SPAST-204ENST00000621856 MYH3P11055 1940 aa26.23■■□□□ 1.79
SPAST-204ENST00000621856 RC3H1Q5TC82 1133 aaKnown RBP26.22■■□□□ 1.79
SPAST-204ENST00000621856 BCL11BQ9C0K0 894 aaPredicted RBP26.22■■□□□ 1.79
SPAST-204ENST00000621856 MAP4K4O95819 1239 aaPredicted RBP26.22■■□□□ 1.79
SPAST-204ENST00000621856 ZNF772Q68DY9 489 aaPredicted RBP26.22■■□□□ 1.79
SPAST-204ENST00000621856 KRT27Q7Z3Y8 459 aa26.22■■□□□ 1.79
SPAST-204ENST00000621856 CSF1RP07333 972 aa26.21■■□□□ 1.79
SPAST-204ENST00000621856 PARP10Q53GL7 1025 aa26.21■■□□□ 1.79
SPAST-204ENST00000621856 CNTROBQ8N137 903 aa26.21■■□□□ 1.79
SPAST-204ENST00000621856 ZNF594Q96JF6 807 aaPredicted RBP26.21■■□□□ 1.79
SPAST-204ENST00000621856 CCDC85AQ96PX6 553 aaPredicted RBP26.21■■□□□ 1.79
SPAST-204ENST00000621856 RBM25P49756 843 aaKnown RBP26.2■■□□□ 1.79
SPAST-204ENST00000621856 TNNI3KQ59H18 835 aa26.2■■□□□ 1.79
SPAST-204ENST00000621856 TAF7LQ5H9L4 462 aa26.2■■□□□ 1.79
SPAST-204ENST00000621856 FPGT-TNNI3KV9GXZ4 949 aa26.2■■□□□ 1.79
SPAST-204ENST00000621856 TAF1LQ8IZX4 1826 aa26.2■■□□□ 1.78
SPAST-204ENST00000621856 EYA2O00167 538 aa26.19■■□□□ 1.78
SPAST-204ENST00000621856 IL15P40933 162 aaPredicted RBP26.19■■□□□ 1.78
SPAST-204ENST00000621856 CTSWP56202 376 aa26.19■■□□□ 1.78
SPAST-204ENST00000621856 SUSD4Q5VX71 490 aa26.19■■□□□ 1.78
SPAST-204ENST00000621856 FAM196AQ6ZSG2 479 aa26.19■■□□□ 1.78
SPAST-204ENST00000621856 UTP14AQ9BVJ6 771 aaKnown RBP26.19■■□□□ 1.78
SPAST-204ENST00000621856 TLR7Q9NYK1 1049 aaKnown RBP26.19■■□□□ 1.78
SPAST-204ENST00000621856 NIP7Q9Y221 180 aaKnown RBP eCLIP26.19■■□□□ 1.78
SPAST-204ENST00000621856 FAM177BA6PVY3 158 aa26.19■■□□□ 1.78
SPAST-204ENST00000621856 PDE8AO60658 829 aa26.19■■□□□ 1.78
SPAST-204ENST00000621856 IFIT5Q13325 482 aaKnown RBP26.19■■□□□ 1.78
SPAST-204ENST00000621856 ATG9AQ7Z3C6 839 aa26.19■■□□□ 1.78
SPAST-204ENST00000621856 RPS6KA4O75676 772 aa26.18■■□□□ 1.78
SPAST-204ENST00000621856 CIAO1O76071 339 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms