RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 TRPM7Q96QT4 1865 aa7.41□□□□□ -1.22
FMR1-217ENST00000620828 MASTLQ96GX5 879 aa7.41□□□□□ -1.22
FMR1-217ENST00000620828 SETDB2Q96T68 719 aa7.41□□□□□ -1.22
FMR1-217ENST00000620828 KIF3CO14782 793 aa7.4□□□□□ -1.22
FMR1-217ENST00000620828 TSR2Q969E8 191 aaKnown RBP7.4□□□□□ -1.22
FMR1-217ENST00000620828 ANXA1P04083 346 aa7.4□□□□□ -1.22
FMR1-217ENST00000620828 NPR1P16066 1061 aa7.4□□□□□ -1.22
FMR1-217ENST00000620828 ZNF652Q9Y2D9 606 aa7.4□□□□□ -1.22
FMR1-217ENST00000620828 G2E3Q7L622 706 aa7.4□□□□□ -1.22
FMR1-217ENST00000620828 PSMD1Q99460 953 aa7.4□□□□□ -1.22
FMR1-217ENST00000620828 DALRD3Q5D0E6 543 aaKnown RBP7.4□□□□□ -1.23
FMR1-217ENST00000620828 C2CD5Q86YS7 1000 aa7.4□□□□□ -1.23
FMR1-217ENST00000620828 CNBD1Q8NA66 436 aa7.4□□□□□ -1.23
FMR1-217ENST00000620828 NIP7Q9Y221 180 aaKnown RBP eCLIP7.4□□□□□ -1.23
FMR1-217ENST00000620828 METTL22Q9BUU2 404 aaPredicted RBP7.39□□□□□ -1.23
FMR1-217ENST00000620828 H7C1W4 665 aa7.39□□□□□ -1.23
FMR1-217ENST00000620828 MSH5O43196 834 aa7.39□□□□□ -1.23
FMR1-217ENST00000620828 NYXQ9GZU5 481 aa7.39□□□□□ -1.23
FMR1-217ENST00000620828 SYNE4Q8N205 404 aa7.39□□□□□ -1.23
FMR1-217ENST00000620828 ZBTB22O15209 634 aa7.39□□□□□ -1.23
FMR1-217ENST00000620828 MYL6BP14649 208 aa7.39□□□□□ -1.23
FMR1-217ENST00000620828 HDGFL1Q5TGJ6 251 aa7.39□□□□□ -1.23
FMR1-217ENST00000620828 PRPF40BQ6NWY9 871 aaKnown RBP7.39□□□□□ -1.23
FMR1-217ENST00000620828 TTLL6Q8N841 843 aa7.39□□□□□ -1.23
FMR1-217ENST00000620828 ABCC4O15439 1325 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 VPS33BQ9H267 617 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 FZD9O00144 591 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 YY1P25490 414 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 ANKRD13DQ6ZTN6 518 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 MRPL50Q8N5N7 158 aaKnown RBP7.38□□□□□ -1.23
FMR1-217ENST00000620828 NEFMP07197 916 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 CSF1RP07333 972 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 TPTE2Q6XPS3 522 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 L3MBTL3Q96JM7 780 aaPredicted RBP7.38□□□□□ -1.23
FMR1-217ENST00000620828 PCCAP05165 728 aaPredicted RBP7.38□□□□□ -1.23
FMR1-217ENST00000620828 HSP90AB3PQ58FF7 597 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 BEND3Q5T5X7 828 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 KSR2Q6VAB6 950 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 ZBTB38Q8NAP3 1195 aaPredicted RBP7.38□□□□□ -1.23
FMR1-217ENST00000620828 KAZALD1Q96I82 304 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 ZBTB3Q9H5J0 574 aa7.38□□□□□ -1.23
FMR1-217ENST00000620828 H0YIN7 160 aa7.37□□□□□ -1.23
FMR1-217ENST00000620828 TWISTNBQ3B726 338 aaPredicted RBP7.37□□□□□ -1.23
FMR1-217ENST00000620828 KIF6Q6ZMV9 814 aa7.37□□□□□ -1.23
FMR1-217ENST00000620828 RASSF7Q02833 373 aa7.37□□□□□ -1.23
FMR1-217ENST00000620828 CCDC191Q8NCU4 936 aa7.37□□□□□ -1.23
FMR1-217ENST00000620828 ST5P78524 1137 aa7.37□□□□□ -1.23
FMR1-217ENST00000620828 NEUROD2Q15784 382 aa7.37□□□□□ -1.23
FMR1-217ENST00000620828 CCDC30Q5VVM6 783 aa7.37□□□□□ -1.23
FMR1-217ENST00000620828 PODXL2Q9NZ53 605 aa7.37□□□□□ -1.23
FMR1-217ENST00000620828 MYH13Q9UKX3 1938 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 NEURL1BA8MQ27 555 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 EXOSC9Q06265 439 aaKnown RBP7.36□□□□□ -1.23
FMR1-217ENST00000620828 GRIPAP1Q4V328 841 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 NUTM1Q86Y26 1132 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 UTP14AQ9BVJ6 771 aaKnown RBP7.36□□□□□ -1.23
FMR1-217ENST00000620828 FKBP4Q02790 459 aaKnown RBP eCLIP7.36□□□□□ -1.23
FMR1-217ENST00000620828 GPR162Q16538 588 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 NBPF5PQ86XG9 351 aaPredicted RBP7.36□□□□□ -1.23
FMR1-217ENST00000620828 CNKSR1Q969H4 720 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 FOXO4P98177 505 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 OLFM4Q6UX06 510 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 ATP6V0A2Q9Y487 856 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 FOCADQ5VW36 1801 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 CCDC24Q8N4L8 307 aa7.36□□□□□ -1.23
FMR1-217ENST00000620828 PPP1R42Q7Z4L9 355 aa7.35□□□□□ -1.23
FMR1-217ENST00000620828 ZNF428Q96B54 188 aa7.35□□□□□ -1.23
FMR1-217ENST00000620828 CT47B1P0C2W7 299 aaPredicted RBP7.35□□□□□ -1.23
FMR1-217ENST00000620828 SP8Q8IXZ3 490 aa7.35□□□□□ -1.23
FMR1-217ENST00000620828 DOCK2Q92608 1830 aa7.35□□□□□ -1.23
FMR1-217ENST00000620828 EIF2S2P20042 333 aaKnown RBP7.35□□□□□ -1.23
FMR1-217ENST00000620828 LMNB1P20700 586 aa7.35□□□□□ -1.23
FMR1-217ENST00000620828 ALDH1L2Q3SY69 923 aa7.35□□□□□ -1.23
FMR1-217ENST00000620828 BICDL1Q6ZP65 573 aa7.35□□□□□ -1.23
FMR1-217ENST00000620828 MIER1Q8N108 512 aa7.35□□□□□ -1.23
FMR1-217ENST00000620828 SH3TC1Q8TE82 1336 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 E9PSI1 815 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 FLIIQ13045 1269 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 SOGA3Q5TF21 947 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 C9orf131Q5VYM1 1079 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 CDK5RAP2Q96SN8 1893 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 GRAPQ13588 217 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 RABL6Q3YEC7 729 aaPredicted RBP7.34□□□□□ -1.23
FMR1-217ENST00000620828 GRAPLQ8TC17 118 aaPredicted RBP7.34□□□□□ -1.23
FMR1-217ENST00000620828 CDCA7LQ96GN5 454 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 BCS1LQ9Y276 419 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 GCKRQ14397 625 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 MAP3K2Q9Y2U5 619 aa7.34□□□□□ -1.23
FMR1-217ENST00000620828 ALDH1B1P30837 517 aa7.34□□□□□ -1.24
FMR1-217ENST00000620828 CC2D2BQ6DHV5 1058 aa7.34□□□□□ -1.24
FMR1-217ENST00000620828 GPTP24298 496 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 PASKQ96RG2 1323 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 ZNF541Q9H0D2 1346 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 MAST2Q6P0Q8 1798 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 GLTPD2A6NH11 291 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 C21orf2O43822 256 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 C15orf52Q6ZUT6 534 aaKnown RBP7.33□□□□□ -1.24
FMR1-217ENST00000620828 TTLL11Q8NHH1 800 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 PGAP2Q9UHJ9 254 aa7.33□□□□□ -1.24
FMR1-217ENST00000620828 OTOFQ9HC10 1997 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms