RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 TBC1D2BQ9UPU7 963 aa15.61■□□□□ 0.09
TNFAIP3-209ENST00000619035 HLFQ16534 295 aa15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 PTF1AQ7RTS3 328 aa15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 DZIP3Q86Y13 1208 aaKnown RBP15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 ERC1Q8IUD2 1116 aa15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 CCDC87Q9NVE4 849 aa15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 RREB1Q92766 1687 aa15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 GPTP24298 496 aa15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 LMBR1LQ6UX01 489 aa15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 GIGYF2Q6Y7W6 1299 aaKnown RBP15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 ISCA1Q9BUE6 129 aa15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 NHSQ6T4R5 1651 aa15.6■□□□□ 0.09
TNFAIP3-209ENST00000619035 HSP90AB3PQ58FF7 597 aa15.59■□□□□ 0.09
TNFAIP3-209ENST00000619035 CLASRPQ8N2M8 674 aaKnown RBP15.59■□□□□ 0.09
TNFAIP3-209ENST00000619035 KCNQ4P56696 695 aa15.59■□□□□ 0.09
TNFAIP3-209ENST00000619035 RABL6Q3YEC7 729 aaPredicted RBP15.59■□□□□ 0.09
TNFAIP3-209ENST00000619035 INTS5Q6P9B9 1019 aaKnown RBP15.59■□□□□ 0.09
TNFAIP3-209ENST00000619035 TRIM6-TRIM34B2RNG4 842 aa15.58■□□□□ 0.08
TNFAIP3-209ENST00000619035 ERVV-1B6SEH8 477 aa15.58■□□□□ 0.08
TNFAIP3-209ENST00000619035 QTRT2Q9H974 415 aaKnown RBP15.58■□□□□ 0.08
TNFAIP3-209ENST00000619035 STAP2Q9UGK3 403 aa15.58■□□□□ 0.08
TNFAIP3-209ENST00000619035 FOXO4P98177 505 aa15.57■□□□□ 0.08
TNFAIP3-209ENST00000619035 RILPL2Q969X0 211 aa15.57■□□□□ 0.08
TNFAIP3-209ENST00000619035 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
TNFAIP3-209ENST00000619035 SASH1O94885 1247 aa15.57■□□□□ 0.08
TNFAIP3-209ENST00000619035 CASC1Q6TDU7 716 aa15.57■□□□□ 0.08
TNFAIP3-209ENST00000619035 TBC1D2Q9BYX2 928 aa15.57■□□□□ 0.08
TNFAIP3-209ENST00000619035 IFIT2P09913 472 aaKnown RBP15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 AACSQ86V21 672 aa15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 SEPT12Q8IYM1 358 aa15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 SPRYD3Q8NCJ5 442 aa15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 COL5A3P25940 1745 aaPredicted RBP15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 EIF5BO60841 1220 aaKnown RBP15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 RFX5P48382 616 aaPredicted RBP15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 EIF5P55010 431 aaKnown RBP15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 PTPN12Q05209 780 aaKnown RBP15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 SLKQ9H2G2 1235 aaPredicted RBP15.56■□□□□ 0.08
TNFAIP3-209ENST00000619035 MAP4K4O95819 1239 aaPredicted RBP15.55■□□□□ 0.08
TNFAIP3-209ENST00000619035 BECN1Q14457 450 aa15.55■□□□□ 0.08
TNFAIP3-209ENST00000619035 COPRSQ9NQ92 184 aa15.55■□□□□ 0.08
TNFAIP3-209ENST00000619035 SBF2Q86WG5 1849 aa15.55■□□□□ 0.08
TNFAIP3-209ENST00000619035 AOX1Q06278 1338 aa15.55■□□□□ 0.08
TNFAIP3-209ENST00000619035 NLRP10Q86W26 655 aa15.55■□□□□ 0.08
TNFAIP3-209ENST00000619035 BTAF1O14981 1849 aa15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 ANKRD36CQ5JPF3 1778 aa15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 RGL2O15211 777 aa15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 PCCAP05165 728 aaPredicted RBP15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 ZNF772Q68DY9 489 aaPredicted RBP15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 ZBTB38Q8NAP3 1195 aaPredicted RBP15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 CCDC85AQ96PX6 553 aaPredicted RBP15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 SYNE4Q8N205 404 aa15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 LINC00116Q8NCU8 138 aa15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 PI4K2BQ8TCG2 481 aa15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 CCDC8Q9H0W5 538 aaPredicted RBP15.54■□□□□ 0.08
TNFAIP3-209ENST00000619035 EAF2Q96CJ1 260 aaPredicted RBP15.53■□□□□ 0.08
TNFAIP3-209ENST00000619035 GPATCH3Q96I76 525 aa15.53■□□□□ 0.08
TNFAIP3-209ENST00000619035 TRMT112Q9UI30 125 aaKnown RBP15.53■□□□□ 0.08
TNFAIP3-209ENST00000619035 NUP98P52948 1817 aa15.52■□□□□ 0.08
TNFAIP3-209ENST00000619035 MYH14Q7Z406 1995 aaKnown RBP15.52■□□□□ 0.08
TNFAIP3-209ENST00000619035 CNTNAP4Q9C0A0 1308 aa15.52■□□□□ 0.08
TNFAIP3-209ENST00000619035 FAM177BA6PVY3 158 aa15.52■□□□□ 0.07
TNFAIP3-209ENST00000619035 TFCP2Q12800 502 aa15.52■□□□□ 0.07
TNFAIP3-209ENST00000619035 RC3H1Q5TC82 1133 aaKnown RBP15.52■□□□□ 0.07
TNFAIP3-209ENST00000619035 ZNF594Q96JF6 807 aaPredicted RBP15.52■□□□□ 0.07
TNFAIP3-209ENST00000619035 ECHDC1Q9NTX5 307 aa15.52■□□□□ 0.07
TNFAIP3-209ENST00000619035 TLR7Q9NYK1 1049 aaKnown RBP15.52■□□□□ 0.07
TNFAIP3-209ENST00000619035 TTC41PQ6P2S7 1318 aa15.52■□□□□ 0.07
TNFAIP3-209ENST00000619035 UBN2Q6ZU65 1347 aa15.52■□□□□ 0.07
TNFAIP3-209ENST00000619035 ERC2O15083 957 aa15.51■□□□□ 0.07
TNFAIP3-209ENST00000619035 NFKBIBQ15653 356 aa15.51■□□□□ 0.07
TNFAIP3-209ENST00000619035 LY75O60449 1722 aa15.51■□□□□ 0.07
TNFAIP3-209ENST00000619035 TUBGCP6Q96RT7 1819 aa15.51■□□□□ 0.07
TNFAIP3-209ENST00000619035 HMGB2P26583 209 aaKnown RBP15.51■□□□□ 0.07
TNFAIP3-209ENST00000619035 RBM25P49756 843 aaKnown RBP15.51■□□□□ 0.07
TNFAIP3-209ENST00000619035 CCDC57Q2TAC2 916 aa15.51■□□□□ 0.07
TNFAIP3-209ENST00000619035 PLA2G12BQ9BX93 195 aa15.51■□□□□ 0.07
TNFAIP3-209ENST00000619035 CDHR2Q9BYE9 1310 aa15.5■□□□□ 0.07
TNFAIP3-209ENST00000619035 GLRX3O76003 335 aaKnown RBP15.5■□□□□ 0.07
TNFAIP3-209ENST00000619035 CAMTA2O94983 1202 aa15.5■□□□□ 0.07
TNFAIP3-209ENST00000619035 FAM196AQ6ZSG2 479 aa15.5■□□□□ 0.07
TNFAIP3-209ENST00000619035 BCL11BQ9C0K0 894 aaPredicted RBP15.5■□□□□ 0.07
TNFAIP3-209ENST00000619035 CCNL1Q9UK58 526 aaPredicted RBP15.5■□□□□ 0.07
TNFAIP3-209ENST00000619035 USP42Q9H9J4 1324 aaKnown RBP15.5■□□□□ 0.07
TNFAIP3-209ENST00000619035 SMIM5Q71RC9 77 aa15.5■□□□□ 0.07
TNFAIP3-209ENST00000619035 ZNF34Q8IZ26 560 aa15.5■□□□□ 0.07
TNFAIP3-209ENST00000619035 IRS4O14654 1257 aaPredicted RBP15.49■□□□□ 0.07
TNFAIP3-209ENST00000619035 RBM6P78332 1123 aaKnown RBP15.49■□□□□ 0.07
TNFAIP3-209ENST00000619035 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
TNFAIP3-209ENST00000619035 KIF2CQ99661 725 aa15.49■□□□□ 0.07
TNFAIP3-209ENST00000619035 TNNI3KQ59H18 835 aa15.48■□□□□ 0.07
TNFAIP3-209ENST00000619035 TAF7LQ5H9L4 462 aa15.48■□□□□ 0.07
TNFAIP3-209ENST00000619035 FPGT-TNNI3KV9GXZ4 949 aa15.48■□□□□ 0.07
TNFAIP3-209ENST00000619035 CHMLP26374 656 aa15.48■□□□□ 0.07
TNFAIP3-209ENST00000619035 LRRC24Q50LG9 513 aa15.48■□□□□ 0.07
TNFAIP3-209ENST00000619035 CLEC4GQ6UXB4 293 aa15.48■□□□□ 0.07
TNFAIP3-209ENST00000619035 AK7Q96M32 723 aa15.48■□□□□ 0.07
TNFAIP3-209ENST00000619035 NIP7Q9Y221 180 aaKnown RBP eCLIP15.48■□□□□ 0.07
TNFAIP3-209ENST00000619035 REC8O95072 547 aa15.47■□□□□ 0.07
TNFAIP3-209ENST00000619035 IFIT5Q13325 482 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms