RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 COPS6Q7L5N1 327 aa28.43■■■□□ 2.14
TRAF4-217ENST00000618771 XAGE3Q8WTP9 111 aa28.43■■■□□ 2.14
TRAF4-217ENST00000618771 CHPF2Q9P2E5 772 aa28.43■■■□□ 2.14
TRAF4-217ENST00000618771 AIMP1Q12904 312 aaKnown RBP28.42■■■□□ 2.14
TRAF4-217ENST00000618771 SUSD4Q5VX71 490 aa28.42■■■□□ 2.14
TRAF4-217ENST00000618771 DUSP27Q5VZP5 1158 aa28.42■■■□□ 2.14
TRAF4-217ENST00000618771 ERFEQ4G0M1 354 aa28.41■■■□□ 2.14
TRAF4-217ENST00000618771 PARP10Q53GL7 1025 aa28.4■■■□□ 2.14
TRAF4-217ENST00000618771 RIC1Q4ADV7 1423 aa28.4■■■□□ 2.14
TRAF4-217ENST00000618771 SOGA3Q5TF21 947 aa28.39■■■□□ 2.14
TRAF4-217ENST00000618771 DBF4Q9UBU7 674 aaPredicted RBP28.39■■■□□ 2.14
TRAF4-217ENST00000618771 NTSR2O95665 410 aa28.38■■■□□ 2.13
TRAF4-217ENST00000618771 HSP90AB3PQ58FF7 597 aa28.38■■■□□ 2.13
TRAF4-217ENST00000618771 COL13A1Q5TAT6 717 aaPredicted RBP28.38■■■□□ 2.13
TRAF4-217ENST00000618771 DPY19L2Q6NUT2 758 aa28.38■■■□□ 2.13
TRAF4-217ENST00000618771 PPP1R42Q7Z4L9 355 aa28.38■■■□□ 2.13
TRAF4-217ENST00000618771 POTECB2RU33 542 aa28.37■■■□□ 2.13
TRAF4-217ENST00000618771 TAOK3Q9H2K8 898 aa28.37■■■□□ 2.13
TRAF4-217ENST00000618771 LTBP3Q9NS15 1303 aa28.37■■■□□ 2.13
TRAF4-217ENST00000618771 CRY2Q49AN0 593 aa28.36■■■□□ 2.13
TRAF4-217ENST00000618771 ALDH1B1P30837 517 aa28.35■■■□□ 2.13
TRAF4-217ENST00000618771 C7orf43Q8WVR3 580 aa28.35■■■□□ 2.13
TRAF4-217ENST00000618771 CCDC27Q2M243 656 aa28.34■■■□□ 2.13
TRAF4-217ENST00000618771 CCDC93Q567U6 631 aa28.34■■■□□ 2.13
TRAF4-217ENST00000618771 UTP14AQ9BVJ6 771 aaKnown RBP28.34■■■□□ 2.13
TRAF4-217ENST00000618771 HYPKQ9NX55 129 aa28.34■■■□□ 2.13
TRAF4-217ENST00000618771 LAMB2P55268 1798 aa28.34■■■□□ 2.13
TRAF4-217ENST00000618771 TCIRG1Q13488 830 aa28.33■■■□□ 2.13
TRAF4-217ENST00000618771 RPGRQ92834 1020 aaKnown RBP28.33■■■□□ 2.13
TRAF4-217ENST00000618771 ELL2O00472 640 aaPredicted RBP28.32■■■□□ 2.12
TRAF4-217ENST00000618771 PLBD2Q8NHP8 589 aa28.32■■■□□ 2.12
TRAF4-217ENST00000618771 NLRP10Q86W26 655 aa28.31■■■□□ 2.12
TRAF4-217ENST00000618771 WWC1Q8IX03 1113 aa28.31■■■□□ 2.12
TRAF4-217ENST00000618771 RNF123Q5XPI4 1314 aa28.31■■■□□ 2.12
TRAF4-217ENST00000618771 ANKRD13DQ6ZTN6 518 aa28.3■■■□□ 2.12
TRAF4-217ENST00000618771 C8orf58Q8NAV2 365 aa28.3■■■□□ 2.12
TRAF4-217ENST00000618771 HOXA10P31260 410 aaPredicted RBP28.29■■■□□ 2.12
TRAF4-217ENST00000618771 SLC10A5Q5PT55 438 aa28.28■■■□□ 2.12
TRAF4-217ENST00000618771 OLFM4Q6UX06 510 aa28.28■■■□□ 2.12
TRAF4-217ENST00000618771 C3orf67Q6ZVT6 689 aa28.28■■■□□ 2.12
TRAF4-217ENST00000618771 NLRP3Q96P20 1036 aa28.28■■■□□ 2.12
TRAF4-217ENST00000618771 NCBP3Q53F19 620 aaKnown RBP28.27■■■□□ 2.12
TRAF4-217ENST00000618771 RTKN2Q8IZC4 609 aa28.27■■■□□ 2.12
TRAF4-217ENST00000618771 TSR2Q969E8 191 aaKnown RBP28.27■■■□□ 2.12
TRAF4-217ENST00000618771 DDNO94850 711 aaPredicted RBP28.26■■■□□ 2.11
TRAF4-217ENST00000618771 FKBP4Q02790 459 aaKnown RBP eCLIP28.26■■■□□ 2.11
TRAF4-217ENST00000618771 RBM17Q96I25 401 aaKnown RBP28.26■■■□□ 2.11
TRAF4-217ENST00000618771 TRMT112Q9UI30 125 aaKnown RBP28.26■■■□□ 2.11
TRAF4-217ENST00000618771 DDX60Q8IY21 1712 aaKnown RBP28.26■■■□□ 2.11
TRAF4-217ENST00000618771 CRAMP1Q96RY5 1269 aa28.25■■■□□ 2.11
TRAF4-217ENST00000618771 CHMP4AQ9BY43 222 aa28.25■■■□□ 2.11
TRAF4-217ENST00000618771 SH3TC1Q8TE82 1336 aa28.24■■■□□ 2.11
TRAF4-217ENST00000618771 HSPA1AP0DMV8 641 aaKnown RBP28.24■■■□□ 2.11
TRAF4-217ENST00000618771 HSPA1BP0DMV9 641 aaKnown RBP28.24■■■□□ 2.11
TRAF4-217ENST00000618771 TNS4Q8IZW8 715 aa28.24■■■□□ 2.11
TRAF4-217ENST00000618771 TSPYL6Q8N831 410 aa28.24■■■□□ 2.11
TRAF4-217ENST00000618771 IL16Q14005 1332 aa28.23■■■□□ 2.11
TRAF4-217ENST00000618771 CAPN15O75808 1086 aa28.23■■■□□ 2.11
TRAF4-217ENST00000618771 GOLGA2Q08379 1002 aa28.23■■■□□ 2.11
TRAF4-217ENST00000618771 CCDC30Q5VVM6 783 aa28.23■■■□□ 2.11
TRAF4-217ENST00000618771 ISCA1Q9BUE6 129 aa28.23■■■□□ 2.11
TRAF4-217ENST00000618771 PHAXQ9H814 394 aaKnown RBP28.23■■■□□ 2.11
TRAF4-217ENST00000618771 SNED1Q8TER0 1413 aa28.23■■■□□ 2.11
TRAF4-217ENST00000618771 ATP5J2-PTCD1G3V325 749 aa28.22■■■□□ 2.11
TRAF4-217ENST00000618771 POTEIP0CG38 1075 aa28.22■■■□□ 2.11
TRAF4-217ENST00000618771 POTEJP0CG39 1038 aa28.22■■■□□ 2.11
TRAF4-217ENST00000618771 HCLS1P14317 486 aaPredicted RBP28.22■■■□□ 2.11
TRAF4-217ENST00000618771 CC2D2BQ6DHV5 1058 aa28.22■■■□□ 2.11
TRAF4-217ENST00000618771 CHADLQ6NUI6 762 aa28.22■■■□□ 2.11
TRAF4-217ENST00000618771 SYNE4Q8N205 404 aa28.22■■■□□ 2.11
TRAF4-217ENST00000618771 ZNF428Q96B54 188 aa28.22■■■□□ 2.11
TRAF4-217ENST00000618771 ZNF277Q9NRM2 450 aaPredicted RBP28.22■■■□□ 2.11
TRAF4-217ENST00000618771 TAF1P21675 1872 aa28.21■■■□□ 2.11
TRAF4-217ENST00000618771 RIC3Q7Z5B4 369 aa28.21■■■□□ 2.11
TRAF4-217ENST00000618771 PPEF1O14829 653 aaPredicted RBP28.2■■■□□ 2.1
TRAF4-217ENST00000618771 FAM9BQ8IZU0 186 aa28.2■■■□□ 2.1
TRAF4-217ENST00000618771 SALL2Q9Y467 1007 aaPredicted RBP28.2■■■□□ 2.1
TRAF4-217ENST00000618771 CACNA1FO60840 1977 aa28.2■■■□□ 2.1
TRAF4-217ENST00000618771 PSMD1Q99460 953 aa28.18■■■□□ 2.1
TRAF4-217ENST00000618771 ABCC4O15439 1325 aa28.18■■■□□ 2.1
TRAF4-217ENST00000618771 TRIM28Q13263 835 aaKnown RBP28.17■■■□□ 2.1
TRAF4-217ENST00000618771 GRIPAP1Q4V328 841 aa28.17■■■□□ 2.1
TRAF4-217ENST00000618771 CREBZFQ9NS37 354 aa28.17■■■□□ 2.1
TRAF4-217ENST00000618771 TCERG1O14776 1098 aaKnown RBP28.16■■■□□ 2.1
TRAF4-217ENST00000618771 IARSP41252 1262 aaKnown RBP28.16■■■□□ 2.1
TRAF4-217ENST00000618771 TWISTNBQ3B726 338 aaPredicted RBP28.16■■■□□ 2.1
TRAF4-217ENST00000618771 WDR63Q8IWG1 891 aa28.16■■■□□ 2.1
TRAF4-217ENST00000618771 MKRN1Q9UHC7 482 aaKnown RBP28.16■■■□□ 2.1
TRAF4-217ENST00000618771 FANCIQ9NVI1 1328 aa28.16■■■□□ 2.1
TRAF4-217ENST00000618771 DDX58O95786 925 aaKnown RBP28.15■■■□□ 2.1
TRAF4-217ENST00000618771 FAM89AQ96GI7 184 aa28.15■■■□□ 2.1
TRAF4-217ENST00000618771 STK31Q9BXU1 1019 aa28.15■■■□□ 2.1
TRAF4-217ENST00000618771 IQCA1LA6NCM1 817 aa28.14■■■□□ 2.1
TRAF4-217ENST00000618771 SLC51AQ86UW1 340 aa28.14■■■□□ 2.1
TRAF4-217ENST00000618771 TMX4Q9H1E5 349 aaPredicted RBP28.14■■■□□ 2.1
TRAF4-217ENST00000618771 SCN4AP35499 1836 aa28.13■■■□□ 2.09
TRAF4-217ENST00000618771 DDX46Q7L014 1031 aaKnown RBP28.13■■■□□ 2.09
TRAF4-217ENST00000618771 MYD88Q99836 296 aa28.13■■■□□ 2.09
TRAF4-217ENST00000618771 ATP6V0A2Q9Y487 856 aa28.13■■■□□ 2.09
TRAF4-217ENST00000618771 RTL5Q5HYW3 569 aaPredicted RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms