RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 ZSCAN20P17040 1043 aaPredicted RBP14.78□□□□□ -0.04
SRRT-216ENST00000618262 GEMIN8Q9NWZ8 242 aaKnown RBP14.78□□□□□ -0.04
SRRT-216ENST00000618262 C1orf115Q9H7X2 142 aa14.78□□□□□ -0.04
SRRT-216ENST00000618262 STARD3NLO95772 234 aa14.77□□□□□ -0.04
SRRT-216ENST00000618262 CYP19A1P11511 503 aaPredicted RBP14.77□□□□□ -0.04
SRRT-216ENST00000618262 TXNRD1Q16881 649 aa14.77□□□□□ -0.04
SRRT-216ENST00000618262 BICDL1Q6ZP65 573 aa14.77□□□□□ -0.04
SRRT-216ENST00000618262 SLC20A2Q08357 652 aa14.77□□□□□ -0.05
SRRT-216ENST00000618262 EP400NLQ6ZTU2 488 aa14.77□□□□□ -0.05
SRRT-216ENST00000618262 DBF4Q9UBU7 674 aaPredicted RBP14.77□□□□□ -0.05
SRRT-216ENST00000618262 SF3B2Q13435 895 aaKnown RBP14.76□□□□□ -0.05
SRRT-216ENST00000618262 BANK1Q8NDB2 785 aa14.76□□□□□ -0.05
SRRT-216ENST00000618262 GPTP24298 496 aa14.76□□□□□ -0.05
SRRT-216ENST00000618262 ZKSCAN2Q63HK3 967 aa14.76□□□□□ -0.05
SRRT-216ENST00000618262 TMEM57Q8N5G2 664 aa14.76□□□□□ -0.05
SRRT-216ENST00000618262 CWF19L2Q2TBE0 894 aaKnown RBP14.76□□□□□ -0.05
SRRT-216ENST00000618262 RIC3Q7Z5B4 369 aa14.76□□□□□ -0.05
SRRT-216ENST00000618262 CCDC24Q8N4L8 307 aa14.76□□□□□ -0.05
SRRT-216ENST00000618262 ATF7IPQ6VMQ6 1270 aa14.75□□□□□ -0.05
SRRT-216ENST00000618262 YY1AP1Q9H869 796 aa14.75□□□□□ -0.05
SRRT-216ENST00000618262 MAP3K2Q9Y2U5 619 aa14.75□□□□□ -0.05
SRRT-216ENST00000618262 KCPQ6ZWJ8 1503 aa14.75□□□□□ -0.05
SRRT-216ENST00000618262 FOXD4L6Q3SYB3 417 aaPredicted RBP14.75□□□□□ -0.05
SRRT-216ENST00000618262 FOXD4L3Q6VB84 417 aaPredicted RBP14.75□□□□□ -0.05
SRRT-216ENST00000618262 PDGFDQ9GZP0 370 aaPredicted RBP14.75□□□□□ -0.05
SRRT-216ENST00000618262 ZNF500O60304 480 aaPredicted RBP14.74□□□□□ -0.05
SRRT-216ENST00000618262 SMARCC1Q92922 1105 aaPredicted RBP14.74□□□□□ -0.05
SRRT-216ENST00000618262 BABAM1Q9NWV8 329 aa14.74□□□□□ -0.05
SRRT-216ENST00000618262 SRP68Q9UHB9 627 aaKnown RBP14.74□□□□□ -0.05
SRRT-216ENST00000618262 MRC1P22897 1456 aa14.74□□□□□ -0.05
SRRT-216ENST00000618262 INTS5Q6P9B9 1019 aaKnown RBP14.74□□□□□ -0.05
SRRT-216ENST00000618262 DZIP1LQ8IYY4 767 aaKnown RBP14.73□□□□□ -0.05
SRRT-216ENST00000618262 DDX21Q9NR30 783 aaKnown RBP eCLIP14.73□□□□□ -0.05
SRRT-216ENST00000618262 RBM25P49756 843 aaKnown RBP14.73□□□□□ -0.05
SRRT-216ENST00000618262 HLFQ16534 295 aa14.73□□□□□ -0.05
SRRT-216ENST00000618262 TFCP2L1Q9NZI6 479 aa14.73□□□□□ -0.05
SRRT-216ENST00000618262 HSP90AB4PQ58FF6 505 aa14.73□□□□□ -0.05
SRRT-216ENST00000618262 SGSM3Q96HU1 749 aa14.73□□□□□ -0.05
SRRT-216ENST00000618262 C5P01031 1676 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 ALDH1L2Q3SY69 923 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 AK7Q96M32 723 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 MYD88Q99836 296 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 CCDC87Q9NVE4 849 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 BTAF1O14981 1849 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 SIPA1L3O60292 1781 aaPredicted RBP14.72□□□□□ -0.05
SRRT-216ENST00000618262 GOLIM4O00461 696 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 MSL1Q68DK7 614 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 KIAA1211Q6ZU35 1233 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 FAM13BQ9NYF5 915 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 KDM3BQ7LBC6 1761 aa14.72□□□□□ -0.05
SRRT-216ENST00000618262 ZNF827Q17R98 1081 aa14.71□□□□□ -0.05
SRRT-216ENST00000618262 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.71□□□□□ -0.05
SRRT-216ENST00000618262 ANKRD13DQ6ZTN6 518 aa14.71□□□□□ -0.05
SRRT-216ENST00000618262 ZBTB9Q96C00 473 aa14.71□□□□□ -0.05
SRRT-216ENST00000618262 CCDC85AQ96PX6 553 aaPredicted RBP14.71□□□□□ -0.05
SRRT-216ENST00000618262 ADAMTS7Q9UKP4 1686 aa14.71□□□□□ -0.06
SRRT-216ENST00000618262 DZIP3Q86Y13 1208 aaKnown RBP14.7□□□□□ -0.06
SRRT-216ENST00000618262 SYNE4Q8N205 404 aa14.7□□□□□ -0.06
SRRT-216ENST00000618262 KIF16BQ96L93 1317 aa14.7□□□□□ -0.06
SRRT-216ENST00000618262 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.7□□□□□ -0.06
SRRT-216ENST00000618262 RAD21O60216 631 aa14.7□□□□□ -0.06
SRRT-216ENST00000618262 ARID4AP29374 1257 aaPredicted RBP14.7□□□□□ -0.06
SRRT-216ENST00000618262 FOXD4L5Q5VV16 416 aaPredicted RBP14.7□□□□□ -0.06
SRRT-216ENST00000618262 FOXD4L4Q8WXT5 416 aaPredicted RBP14.7□□□□□ -0.06
SRRT-216ENST00000618262 HYPKQ9NX55 129 aa14.7□□□□□ -0.06
SRRT-216ENST00000618262 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
SRRT-216ENST00000618262 IPO8O15397 1037 aaKnown RBP14.69□□□□□ -0.06
SRRT-216ENST00000618262 GOLGA6L3A6NEY3 463 aa14.69□□□□□ -0.06
SRRT-216ENST00000618262 LRP10Q7Z4F1 713 aa14.69□□□□□ -0.06
SRRT-216ENST00000618262 SKAP1Q86WV1 359 aa14.69□□□□□ -0.06
SRRT-216ENST00000618262 PSDA5PKW4 1024 aaPredicted RBP14.68□□□□□ -0.06
SRRT-216ENST00000618262 CT47B1P0C2W7 299 aaPredicted RBP14.68□□□□□ -0.06
SRRT-216ENST00000618262 NBPF9Q3BBW0 867 aa14.68□□□□□ -0.06
SRRT-216ENST00000618262 USPL1Q5W0Q7 1092 aa14.68□□□□□ -0.06
SRRT-216ENST00000618262 ESPNB1AK53 854 aa14.68□□□□□ -0.06
SRRT-216ENST00000618262 TERF1P54274 439 aa14.68□□□□□ -0.06
SRRT-216ENST00000618262 ARHGEF1Q92888 912 aaKnown RBP14.68□□□□□ -0.06
SRRT-216ENST00000618262 MEIS3Q99687 375 aa14.68□□□□□ -0.06
SRRT-216ENST00000618262 CGNQ9P2M7 1197 aaKnown RBP14.68□□□□□ -0.06
SRRT-216ENST00000618262 RTCBQ9Y3I0 505 aaKnown RBP14.68□□□□□ -0.06
SRRT-216ENST00000618262 HOXB7P09629 217 aa14.67□□□□□ -0.06
SRRT-216ENST00000618262 IRX5P78411 483 aaPredicted RBP14.67□□□□□ -0.06
SRRT-216ENST00000618262 DNAAF4Q8WXU2 420 aa14.67□□□□□ -0.06
SRRT-216ENST00000618262 WWC3Q9ULE0 1092 aa14.67□□□□□ -0.06
SRRT-216ENST00000618262 ADCY9O60503 1353 aa14.67□□□□□ -0.06
SRRT-216ENST00000618262 PLEKHG2Q9H7P9 1386 aa14.67□□□□□ -0.06
SRRT-216ENST00000618262 MAP2K1Q02750 393 aaPredicted RBP14.67□□□□□ -0.06
SRRT-216ENST00000618262 TEX13AQ9BXU3 409 aaPredicted RBP14.67□□□□□ -0.06
SRRT-216ENST00000618262 SBF2Q86WG5 1849 aa14.67□□□□□ -0.06
SRRT-216ENST00000618262 BAG6P46379 1132 aa14.67□□□□□ -0.06
SRRT-216ENST00000618262 CASC1Q6TDU7 716 aa14.67□□□□□ -0.06
SRRT-216ENST00000618262 KIF6Q6ZMV9 814 aa14.67□□□□□ -0.06
SRRT-216ENST00000618262 APBB1O00213 710 aa14.66□□□□□ -0.06
SRRT-216ENST00000618262 NBPF7P0C2Y1 421 aaPredicted RBP14.66□□□□□ -0.06
SRRT-216ENST00000618262 ARMCX6Q7L4S7 300 aa14.66□□□□□ -0.06
SRRT-216ENST00000618262 OTUD6BQ8N6M0 293 aa14.66□□□□□ -0.06
SRRT-216ENST00000618262 RFC4P35249 363 aa14.66□□□□□ -0.06
SRRT-216ENST00000618262 KSR2Q6VAB6 950 aa14.66□□□□□ -0.06
SRRT-216ENST00000618262 ZNF513Q8N8E2 541 aaPredicted RBP14.66□□□□□ -0.06
SRRT-216ENST00000618262 CAMKK2Q96RR4 588 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms