RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 BICDL1Q6ZP65 573 aa25.56■■□□□ 1.68
SDHA-220ENST00000617470 BCL2L12Q9HB09 334 aa25.56■■□□□ 1.68
SDHA-220ENST00000617470 CLEC4GQ6UXB4 293 aa25.55■■□□□ 1.68
SDHA-220ENST00000617470 SRCIN1Q9C0H9 1055 aa25.55■■□□□ 1.68
SDHA-220ENST00000617470 PDGFDQ9GZP0 370 aaPredicted RBP25.55■■□□□ 1.68
SDHA-220ENST00000617470 SOCS7O14512 581 aa25.55■■□□□ 1.68
SDHA-220ENST00000617470 GYS1P13807 737 aa25.55■■□□□ 1.68
SDHA-220ENST00000617470 CWF19L2Q2TBE0 894 aaKnown RBP25.55■■□□□ 1.68
SDHA-220ENST00000617470 BEND3Q5T5X7 828 aa25.55■■□□□ 1.68
SDHA-220ENST00000617470 PSDA5PKW4 1024 aaPredicted RBP25.54■■□□□ 1.68
SDHA-220ENST00000617470 CHD1LQ86WJ1 897 aa25.54■■□□□ 1.68
SDHA-220ENST00000617470 SCN7AQ01118 1682 aa25.54■■□□□ 1.68
SDHA-220ENST00000617470 BCORQ6W2J9 1755 aa25.54■■□□□ 1.68
SDHA-220ENST00000617470 RPAP2Q8IXW5 612 aaPredicted RBP25.53■■□□□ 1.68
SDHA-220ENST00000617470 NIP7Q9Y221 180 aaKnown RBP eCLIP25.53■■□□□ 1.68
SDHA-220ENST00000617470 IGKV5-2P06315 115 aa25.53■■□□□ 1.68
SDHA-220ENST00000617470 TBC1D9BQ66K14 1250 aa25.53■■□□□ 1.68
SDHA-220ENST00000617470 MSL1Q68DK7 614 aa25.53■■□□□ 1.68
SDHA-220ENST00000617470 LINS1Q8NG48 757 aa25.53■■□□□ 1.68
SDHA-220ENST00000617470 NUP98P52948 1817 aa25.52■■□□□ 1.68
SDHA-220ENST00000617470 LNPKQ9C0E8 428 aa25.52■■□□□ 1.68
SDHA-220ENST00000617470 QSER1Q2KHR3 1735 aa25.51■■□□□ 1.67
SDHA-220ENST00000617470 DCTPP1Q9H773 170 aa25.51■■□□□ 1.67
SDHA-220ENST00000617470 FAM177BA6PVY3 158 aa25.51■■□□□ 1.67
SDHA-220ENST00000617470 NEURL1BA8MQ27 555 aa25.5■■□□□ 1.67
SDHA-220ENST00000617470 ANP32AP39687 249 aaKnown RBP25.49■■□□□ 1.67
SDHA-220ENST00000617470 ANKRD45Q5TZF3 282 aa25.49■■□□□ 1.67
SDHA-220ENST00000617470 ZNF34Q8IZ26 560 aa25.49■■□□□ 1.67
SDHA-220ENST00000617470 SETDB2Q96T68 719 aa25.49■■□□□ 1.67
SDHA-220ENST00000617470 ISCA1Q9BUE6 129 aa25.49■■□□□ 1.67
SDHA-220ENST00000617470 RGL2O15211 777 aa25.49■■□□□ 1.67
SDHA-220ENST00000617470 NLGN1Q8N2Q7 840 aa25.49■■□□□ 1.67
SDHA-220ENST00000617470 ALDH1L1O75891 902 aa25.48■■□□□ 1.67
SDHA-220ENST00000617470 CWC25Q9NXE8 425 aaPredicted RBP25.48■■□□□ 1.67
SDHA-220ENST00000617470 UBN2Q6ZU65 1347 aa25.48■■□□□ 1.67
SDHA-220ENST00000617470 NLRP10Q86W26 655 aa25.47■■□□□ 1.67
SDHA-220ENST00000617470 CCDC191Q8NCU4 936 aa25.47■■□□□ 1.67
SDHA-220ENST00000617470 USP44Q9H0E7 712 aa25.47■■□□□ 1.67
SDHA-220ENST00000617470 NFIXQ14938 502 aa25.47■■□□□ 1.67
SDHA-220ENST00000617470 C9orf78Q9NZ63 289 aaPredicted RBP25.47■■□□□ 1.67
SDHA-220ENST00000617470 GNAI2P04899 355 aa25.46■■□□□ 1.67
SDHA-220ENST00000617470 GCKRQ14397 625 aa25.46■■□□□ 1.67
SDHA-220ENST00000617470 SEC24BO95487 1268 aa25.45■■□□□ 1.67
SDHA-220ENST00000617470 TRIM28Q13263 835 aaKnown RBP25.45■■□□□ 1.67
SDHA-220ENST00000617470 PARP10Q53GL7 1025 aa25.45■■□□□ 1.67
SDHA-220ENST00000617470 RTL5Q5HYW3 569 aaPredicted RBP25.45■■□□□ 1.67
SDHA-220ENST00000617470 ANKRD36CQ5JPF3 1778 aa25.45■■□□□ 1.67
SDHA-220ENST00000617470 AFDNP55196 1824 aaKnown RBP25.45■■□□□ 1.66
SDHA-220ENST00000617470 ZBTB7AO95365 584 aa25.45■■□□□ 1.66
SDHA-220ENST00000617470 GNAI3P08754 354 aa25.45■■□□□ 1.66
SDHA-220ENST00000617470 JARID2Q92833 1246 aaPredicted RBP25.45■■□□□ 1.66
SDHA-220ENST00000617470 SUSD4Q5VX71 490 aa25.44■■□□□ 1.66
SDHA-220ENST00000617470 SLC16A10Q8TF71 515 aa25.44■■□□□ 1.66
SDHA-220ENST00000617470 TRMT112Q9UI30 125 aaKnown RBP25.44■■□□□ 1.66
SDHA-220ENST00000617470 NPHP1O15259 732 aa25.44■■□□□ 1.66
SDHA-220ENST00000617470 PPP1R42Q7Z4L9 355 aa25.44■■□□□ 1.66
SDHA-220ENST00000617470 IPO9Q96P70 1041 aaKnown RBP25.43■■□□□ 1.66
SDHA-220ENST00000617470 MMP10P09238 476 aa25.42■■□□□ 1.66
SDHA-220ENST00000617470 TM4SF1P30408 202 aa25.42■■□□□ 1.66
SDHA-220ENST00000617470 NBPF5PQ86XG9 351 aaPredicted RBP25.42■■□□□ 1.66
SDHA-220ENST00000617470 UTP14AQ9BVJ6 771 aaKnown RBP25.42■■□□□ 1.66
SDHA-220ENST00000617470 CARMIL3Q8ND23 1372 aa25.42■■□□□ 1.66
SDHA-220ENST00000617470 GRM8O00222 908 aa25.42■■□□□ 1.66
SDHA-220ENST00000617470 GTF2E1P29083 439 aaPredicted RBP25.42■■□□□ 1.66
SDHA-220ENST00000617470 UBE3BQ7Z3V4 1068 aa25.42■■□□□ 1.66
SDHA-220ENST00000617470 FAM89AQ96GI7 184 aa25.42■■□□□ 1.66
SDHA-220ENST00000617470 ATF5Q9Y2D1 282 aaPredicted RBP25.41■■□□□ 1.66
SDHA-220ENST00000617470 DDR1Q08345 913 aa25.4■■□□□ 1.66
SDHA-220ENST00000617470 NBPF7P0C2Y1 421 aaPredicted RBP25.4■■□□□ 1.66
SDHA-220ENST00000617470 NUTM1Q86Y26 1132 aa25.4■■□□□ 1.66
SDHA-220ENST00000617470 LRRFIP2Q9Y608 721 aaKnown RBP25.4■■□□□ 1.66
SDHA-220ENST00000617470 PARP3Q9Y6F1 533 aa25.4■■□□□ 1.66
SDHA-220ENST00000617470 SERPINB2P05120 415 aa25.39■■□□□ 1.66
SDHA-220ENST00000617470 ZBTB38Q8NAP3 1195 aaPredicted RBP25.39■■□□□ 1.66
SDHA-220ENST00000617470 NYXQ9GZU5 481 aa25.39■■□□□ 1.66
SDHA-220ENST00000617470 CASZ1Q86V15 1759 aa25.38■■□□□ 1.65
SDHA-220ENST00000617470 POLRMTO00411 1230 aaKnown RBP25.38■■□□□ 1.65
SDHA-220ENST00000617470 NTSR2O95665 410 aa25.38■■□□□ 1.65
SDHA-220ENST00000617470 UBTFL1P0CB47 393 aaPredicted RBP25.38■■□□□ 1.65
SDHA-220ENST00000617470 TPTE2Q6XPS3 522 aa25.38■■□□□ 1.65
SDHA-220ENST00000617470 SYNE4Q8N205 404 aa25.38■■□□□ 1.65
SDHA-220ENST00000617470 MTFR1LQ9H019 292 aa25.38■■□□□ 1.65
SDHA-220ENST00000617470 PNMA6EA0A0J9YXQ4 647 aa25.38■■□□□ 1.65
SDHA-220ENST00000617470 PCCAP05165 728 aaPredicted RBP25.38■■□□□ 1.65
SDHA-220ENST00000617470 ATP8B2P98198 1209 aa25.38■■□□□ 1.65
SDHA-220ENST00000617470 HMMRO75330 724 aa25.37■■□□□ 1.65
SDHA-220ENST00000617470 CCDC24Q8N4L8 307 aa25.37■■□□□ 1.65
SDHA-220ENST00000617470 SH3TC1Q8TE82 1336 aa25.37■■□□□ 1.65
SDHA-220ENST00000617470 H7C1W4 665 aa25.36■■□□□ 1.65
SDHA-220ENST00000617470 CNBD1Q8NA66 436 aa25.36■■□□□ 1.65
SDHA-220ENST00000617470 ERFEQ4G0M1 354 aa25.35■■□□□ 1.65
SDHA-220ENST00000617470 C16orf71Q8IYS4 520 aaPredicted RBP25.35■■□□□ 1.65
SDHA-220ENST00000617470 IRS4O14654 1257 aaPredicted RBP25.34■■□□□ 1.65
SDHA-220ENST00000617470 PLEKHM2Q8IWE5 1019 aa25.34■■□□□ 1.65
SDHA-220ENST00000617470 COL24A1Q17RW2 1714 aa25.34■■□□□ 1.65
SDHA-220ENST00000617470 UTYO14607 1347 aa25.33■■□□□ 1.65
SDHA-220ENST00000617470 SMARCA5O60264 1052 aaPredicted RBP25.33■■□□□ 1.65
SDHA-220ENST00000617470 HCLS1P14317 486 aaPredicted RBP25.33■■□□□ 1.65
SDHA-220ENST00000617470 BMP2KLQ5H9B9 411 aa25.33■■□□□ 1.65
SDHA-220ENST00000617470 IBTKQ9P2D0 1353 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms