RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 CTAGE6Q86UF2 777 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 MICU3Q86XE3 530 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 CTAGE4Q8IX94 777 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 FAM114A2Q9NRY5 505 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 PHACTR2O75167 634 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 SNX16P57768 344 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 RRAGBQ5VZM2 374 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 UTP14AQ9BVJ6 771 aaKnown RBP6.86□□□□□ -1.31
RFX3-212ENST00000617270 STMN4Q9H169 189 aaPredicted RBP6.86□□□□□ -1.31
RFX3-212ENST00000617270 ARID5AQ03989 594 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 FAM160A1Q05DH4 1040 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 CAPZA3Q96KX2 299 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 DDX19AQ9NUU7 478 aaKnown RBP6.86□□□□□ -1.31
RFX3-212ENST00000617270 ATP2A1O14983 1001 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 IVLP07476 585 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 ERCC3P19447 782 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 PTGS1P23219 599 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 UBA7P41226 1012 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 PIP4K2BP78356 416 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 SEPT14Q6ZU15 432 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 STX6O43752 255 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 CCDC172P0C7W6 258 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 TTF1Q15361 905 aaPredicted RBP6.86□□□□□ -1.31
RFX3-212ENST00000617270 ZMYND15Q9H091 742 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 PTCD1O75127 700 aaKnown RBP6.86□□□□□ -1.31
RFX3-212ENST00000617270 STIM2Q9P246 746 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 TFIP11Q9UBB9 837 aaKnown RBP6.86□□□□□ -1.31
RFX3-212ENST00000617270 ZNF213O14771 459 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 ZEB2O60315 1214 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 GMNNO75496 209 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 GJB2P29033 226 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 EPSTI1Q96J88 318 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 RNF41Q9H4P4 317 aaPredicted RBP6.86□□□□□ -1.31
RFX3-212ENST00000617270 GLRX3O76003 335 aaKnown RBP6.86□□□□□ -1.31
RFX3-212ENST00000617270 TMEM57Q8N5G2 664 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 CEP120Q8N960 986 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 RAPGEF2Q9Y4G8 1499 aa6.86□□□□□ -1.31
RFX3-212ENST00000617270 CAPN2P17655 700 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 ZNF165P49910 485 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 LRSAM1Q6UWE0 723 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 GOLIM4O00461 696 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 CFAP70Q5T0N1 1121 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 PLEKHH1Q9ULM0 1364 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 SLC5A1P13866 664 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 TNPO1Q92973 898 aaKnown RBP6.85□□□□□ -1.31
RFX3-212ENST00000617270 VTI1AQ96AJ9 217 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 GTPBP4Q9BZE4 634 aaKnown RBP6.85□□□□□ -1.31
RFX3-212ENST00000617270 CABP1Q9NZU7 370 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 RBM27Q9P2N5 1060 aaKnown RBP6.85□□□□□ -1.31
RFX3-212ENST00000617270 STARD3NLO95772 234 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 CCDC25Q86WR0 208 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 KIF1BPQ96EK5 621 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 PDS5BQ9NTI5 1447 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 AFMP43652 599 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 GRM1Q13255 1194 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 RPGRQ92834 1020 aaKnown RBP6.85□□□□□ -1.31
RFX3-212ENST00000617270 MYD88Q99836 296 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 ARFGAP3Q9NP61 516 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 CECR2Q9BXF3 1484 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 ANKRD30BQ9BXX2 1392 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 CRCPO75575 148 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 HMGB1P09429 215 aaKnown RBP6.85□□□□□ -1.31
RFX3-212ENST00000617270 KIF5BP33176 963 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 HAND2P61296 217 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 GEN1Q17RS7 908 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 CCDC129Q6ZRS4 1044 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 JPH4Q96JJ6 628 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 SEC62Q99442 399 aaKnown RBP6.85□□□□□ -1.31
RFX3-212ENST00000617270 CCDC8Q9H0W5 538 aaPredicted RBP6.85□□□□□ -1.31
RFX3-212ENST00000617270 KCNK9Q9NPC2 374 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 BAZ1AQ9NRL2 1556 aaPredicted RBP6.85□□□□□ -1.31
RFX3-212ENST00000617270 LIMCH1Q9UPQ0 1083 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 OPA1O60313 960 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 IFIT5Q13325 482 aaKnown RBP6.85□□□□□ -1.31
RFX3-212ENST00000617270 SETDB1Q15047 1291 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 TXNDC16Q9P2K2 825 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 DNAI1Q9UI46 699 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 ZNF652Q9Y2D9 606 aa6.85□□□□□ -1.31
RFX3-212ENST00000617270 ZFYP08048 801 aaPredicted RBP6.84□□□□□ -1.31
RFX3-212ENST00000617270 RASA3Q14644 834 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 CPLX4Q7Z7G2 160 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 ERMNQ8TAM6 284 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 RSRC1Q96IZ7 334 aaKnown RBP6.84□□□□□ -1.31
RFX3-212ENST00000617270 CCDC114Q96M63 670 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 SLC26A6Q9BXS9 759 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 KAT14Q9H8E8 782 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 SAMD15Q9P1V8 674 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 KIF5AQ12840 1032 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 TMEM67Q5HYA8 995 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 RPAP2Q8IXW5 612 aaPredicted RBP6.84□□□□□ -1.31
RFX3-212ENST00000617270 ZNF830Q96NB3 372 aaPredicted RBP6.84□□□□□ -1.31
RFX3-212ENST00000617270 AKNAD1Q5T1N1 836 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 CCDC102BQ68D86 513 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 STMN2Q93045 179 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 SELENOOQ9BVL4 669 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 PTPRGP23470 1445 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 IARSP41252 1262 aaKnown RBP6.84□□□□□ -1.31
RFX3-212ENST00000617270 TRIM7Q9C029 511 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 CIB2O75838 187 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 HSPA1LP34931 641 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms