RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CTAGE1Q96RT6 745 aa12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 RNF41Q9H4P4 317 aaPredicted RBP12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 DBF4Q9UBU7 674 aaPredicted RBP12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 EMILIN1Q9Y6C2 1016 aa12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 TMCO5BA8MYB1 307 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 MINDY4BA8MYZ0 360 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 TUBBP07437 444 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 IQCA1Q86XH1 822 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 CCDC85AQ96PX6 553 aaPredicted RBP12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 OPA1O60313 960 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 RHPN1Q8TCX5 695 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 SPINK5Q9NQ38 1064 aaPredicted RBP12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 DISP3Q9P2K9 1392 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 CCDC194A0A1B0GVG4 234 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 AKR1B10O60218 316 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 SPAG1Q07617 926 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 MICALL1Q8N3F8 863 aa12.24□□□□□ -0.45
CLTCL1-209ENST00000617103 CYLC1P35663 651 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 PIP4K2BP78356 416 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 MYD88Q99836 296 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 IRX3P78415 501 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 MAP3K12Q12852 859 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 WWC2Q6AWC2 1192 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 ZGPATQ8N5A5 531 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 RBSNQ9H1K0 784 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 RASSF4Q9H2L5 321 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 PTPN23Q9H3S7 1636 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 GOLIM4O00461 696 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 USP5P45974 858 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 TTC31Q49AM3 519 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 SEC63Q9UGP8 760 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 SCAF11Q99590 1463 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 ZNF76P36508 570 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 ERO1AQ96HE7 468 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 ZNF287Q9HBT7 754 aa12.23□□□□□ -0.45
CLTCL1-209ENST00000617103 CTAGE9A4FU28 777 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 IGHMBP2P38935 993 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 NLRP5P59047 1200 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 AMPD3Q01432 767 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 ATRIPQ8WXE1 791 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 DESP17661 470 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 UBE4AQ14139 1066 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 TMEM266Q2M3C6 531 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 AEBP2Q6ZN18 517 aaPredicted RBP12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 MEIS3Q99687 375 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 NOP2P46087 812 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 FAM69CQ0P6D2 419 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 NBPF11Q86T75 865 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 NME9Q86XW9 330 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 TRIM21P19474 475 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 METAP2P50579 478 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 SYT10Q6XYQ8 523 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 C10orf67Q8IYJ2 551 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 MYRIPQ8NFW9 859 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 TCP11L1Q9NUJ3 509 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 VPS18Q9P253 973 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 RBM8AQ9Y5S9 174 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 PARD3Q8TEW0 1356 aa12.22□□□□□ -0.45
CLTCL1-209ENST00000617103 LMOD1P29536 600 aaPredicted RBP12.21□□□□□ -0.45
CLTCL1-209ENST00000617103 UBA7P41226 1012 aa12.21□□□□□ -0.45
CLTCL1-209ENST00000617103 NCOA7Q8NI08 942 aa12.21□□□□□ -0.45
CLTCL1-209ENST00000617103 GABPB1Q06547 395 aaPredicted RBP12.21□□□□□ -0.45
CLTCL1-209ENST00000617103 CCDC40Q4G0X9 1142 aa12.21□□□□□ -0.46
CLTCL1-209ENST00000617103 RALGAPBQ86X10 1494 aa12.21□□□□□ -0.46
CLTCL1-209ENST00000617103 PCF11O94913 1555 aaKnown RBP12.21□□□□□ -0.46
CLTCL1-209ENST00000617103 ATP2C2O75185 946 aa12.21□□□□□ -0.46
CLTCL1-209ENST00000617103 ZNF445P59923 1031 aa12.21□□□□□ -0.46
CLTCL1-209ENST00000617103 HOOK3Q86VS8 718 aa12.21□□□□□ -0.46
CLTCL1-209ENST00000617103 MICU3Q86XE3 530 aa12.21□□□□□ -0.46
CLTCL1-209ENST00000617103 OTUD6BQ8N6M0 293 aa12.21□□□□□ -0.46
CLTCL1-209ENST00000617103 RMND1Q9NWS8 449 aa12.21□□□□□ -0.46
CLTCL1-209ENST00000617103 CDK13Q14004 1512 aaKnown RBP12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 IFI16Q16666 785 aaKnown RBP12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 TMEM67Q5HYA8 995 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 CATIPQ7Z7H3 387 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 PAF1Q8N7H5 531 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 A0A087WZG4 1122 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 PPFIA3O75145 1194 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 RLBP1P12271 317 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 CTNNBL1Q8WYA6 563 aaPredicted RBP12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 TRIM47Q96LD4 638 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 TCEANC2Q96MN5 208 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 DCTPP1Q9H773 170 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 PIK3R4Q99570 1358 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 MYO1BO43795 1136 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 PRPF4BQ13523 1007 aaKnown RBP12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 IDEP14735 1019 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 IFIT5Q13325 482 aaKnown RBP12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 AMOTQ4VCS5 1084 aa12.2□□□□□ -0.46
CLTCL1-209ENST00000617103 BMP15O95972 392 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 CCDC155Q8N6L0 562 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 UBA5Q9GZZ9 404 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 MKNK2Q9HBH9 465 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 KLF18A0A0U1RQI7 1052 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms