RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 DIAPH3Q9NSV4 1193 aa19.07■□□□□ 0.64
NR1H3-235ENST00000616973 HIP1O00291 1037 aa19.06■□□□□ 0.64
NR1H3-235ENST00000616973 KLHDC4Q8TBB5 520 aa19.06■□□□□ 0.64
NR1H3-235ENST00000616973 LTBP4Q8N2S1 1624 aa19.06■□□□□ 0.64
NR1H3-235ENST00000616973 FOXO4P98177 505 aa19.06■□□□□ 0.64
NR1H3-235ENST00000616973 KIAA1211Q6ZU35 1233 aa19.06■□□□□ 0.64
NR1H3-235ENST00000616973 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.05■□□□□ 0.64
NR1H3-235ENST00000616973 CWC27Q6UX04 472 aaKnown RBP19.05■□□□□ 0.64
NR1H3-235ENST00000616973 JARID2Q92833 1246 aaPredicted RBP19.05■□□□□ 0.64
NR1H3-235ENST00000616973 CCDC8Q9H0W5 538 aaPredicted RBP19.05■□□□□ 0.64
NR1H3-235ENST00000616973 NRAPQ86VF7 1730 aa19.05■□□□□ 0.64
NR1H3-235ENST00000616973 CYP2E1P05181 493 aaPredicted RBP19.04■□□□□ 0.64
NR1H3-235ENST00000616973 PIGBQ92521 554 aa19.04■□□□□ 0.64
NR1H3-235ENST00000616973 TRAK2O60296 914 aa19.04■□□□□ 0.64
NR1H3-235ENST00000616973 CUL4AQ13619 759 aa19.04■□□□□ 0.64
NR1H3-235ENST00000616973 TMX3Q96JJ7 454 aa19.04■□□□□ 0.64
NR1H3-235ENST00000616973 SNRKQ9NRH2 765 aa19.04■□□□□ 0.64
NR1H3-235ENST00000616973 TLR7Q9NYK1 1049 aaKnown RBP19.04■□□□□ 0.64
NR1H3-235ENST00000616973 PHLPP1O60346 1717 aa19.03■□□□□ 0.64
NR1H3-235ENST00000616973 ANKRD36CQ5JPF3 1778 aa19.03■□□□□ 0.64
NR1H3-235ENST00000616973 BCL9O00512 1426 aa19.03■□□□□ 0.64
NR1H3-235ENST00000616973 LMBR1LQ6UX01 489 aa19.03■□□□□ 0.64
NR1H3-235ENST00000616973 ISCA1Q9BUE6 129 aa19.03■□□□□ 0.64
NR1H3-235ENST00000616973 ATG3Q9NT62 314 aa19.03■□□□□ 0.64
NR1H3-235ENST00000616973 SSFA2P28290 1259 aa19.02■□□□□ 0.64
NR1H3-235ENST00000616973 TNNI3KQ59H18 835 aa19.02■□□□□ 0.64
NR1H3-235ENST00000616973 ASAP1Q9ULH1 1129 aa19.02■□□□□ 0.64
NR1H3-235ENST00000616973 FPGT-TNNI3KV9GXZ4 949 aa19.02■□□□□ 0.64
NR1H3-235ENST00000616973 ATP5JP18859 108 aa19.02■□□□□ 0.63
NR1H3-235ENST00000616973 TRIM28Q13263 835 aaKnown RBP19.02■□□□□ 0.63
NR1H3-235ENST00000616973 INTS4Q96HW7 963 aaKnown RBP19.02■□□□□ 0.63
NR1H3-235ENST00000616973 ZBTB3Q9H5J0 574 aa19.02■□□□□ 0.63
NR1H3-235ENST00000616973 SNX14Q9Y5W7 946 aa19.02■□□□□ 0.63
NR1H3-235ENST00000616973 TFCP2Q12800 502 aa19.01■□□□□ 0.63
NR1H3-235ENST00000616973 TCIRG1Q13488 830 aa19.01■□□□□ 0.63
NR1H3-235ENST00000616973 KCNB2Q92953 911 aa19.01■□□□□ 0.63
NR1H3-235ENST00000616973 DOT1LQ8TEK3 1739 aa19■□□□□ 0.63
NR1H3-235ENST00000616973 STARD3NLO95772 234 aa19■□□□□ 0.63
NR1H3-235ENST00000616973 SKOR2Q2VWA4 1001 aaPredicted RBP19■□□□□ 0.63
NR1H3-235ENST00000616973 DNAJC10Q8IXB1 793 aa19■□□□□ 0.63
NR1H3-235ENST00000616973 RFX7Q2KHR2 1363 aa19■□□□□ 0.63
NR1H3-235ENST00000616973 ZGPATQ8N5A5 531 aaKnown RBP19■□□□□ 0.63
NR1H3-235ENST00000616973 GPR108Q9NPR9 543 aa19■□□□□ 0.63
NR1H3-235ENST00000616973 DBNLQ9UJU6 430 aaKnown RBP19■□□□□ 0.63
NR1H3-235ENST00000616973 EXOC5O00471 708 aa18.99■□□□□ 0.63
NR1H3-235ENST00000616973 CDCA7Q9BWT1 371 aaPredicted RBP18.99■□□□□ 0.63
NR1H3-235ENST00000616973 BOLA2Q9H3K6 86 aa18.99■□□□□ 0.63
NR1H3-235ENST00000616973 CCDC171Q6TFL3 1326 aa18.98■□□□□ 0.63
NR1H3-235ENST00000616973 NWD2Q9ULI1 1742 aa18.98■□□□□ 0.63
NR1H3-235ENST00000616973 KAT6BQ8WYB5 2073 aa18.98■□□□□ 0.63
NR1H3-235ENST00000616973 NUP98P52948 1817 aa18.98■□□□□ 0.63
NR1H3-235ENST00000616973 GOLGA6L22H0YM25 854 aa18.98■□□□□ 0.63
NR1H3-235ENST00000616973 KIF6Q6ZMV9 814 aa18.98■□□□□ 0.63
NR1H3-235ENST00000616973 TTC14Q96N46 770 aa18.98■□□□□ 0.63
NR1H3-235ENST00000616973 UPF3BQ9BZI7 483 aaKnown RBP18.98■□□□□ 0.63
NR1H3-235ENST00000616973 BAG4O95429 457 aaKnown RBP18.97■□□□□ 0.63
NR1H3-235ENST00000616973 PTH1RQ03431 593 aa18.97■□□□□ 0.63
NR1H3-235ENST00000616973 NMIQ13287 307 aaPredicted RBP18.97■□□□□ 0.63
NR1H3-235ENST00000616973 ATG9AQ7Z3C6 839 aa18.97■□□□□ 0.63
NR1H3-235ENST00000616973 RASEFQ8IZ41 740 aa18.97■□□□□ 0.63
NR1H3-235ENST00000616973 FSD1Q9BTV5 496 aa18.97■□□□□ 0.63
NR1H3-235ENST00000616973 MYH3P11055 1940 aa18.97■□□□□ 0.63
NR1H3-235ENST00000616973 CIAO1O76071 339 aa18.96■□□□□ 0.63
NR1H3-235ENST00000616973 IL15P40933 162 aaPredicted RBP18.96■□□□□ 0.63
NR1H3-235ENST00000616973 TM6SF1Q9BZW5 370 aa18.96■□□□□ 0.63
NR1H3-235ENST00000616973 THRAP3Q9Y2W1 955 aaKnown RBP18.96■□□□□ 0.63
NR1H3-235ENST00000616973 SPEF2Q9C093 1822 aa18.96■□□□□ 0.63
NR1H3-235ENST00000616973 JCADQ9P266 1359 aa18.96■□□□□ 0.63
NR1H3-235ENST00000616973 MED23Q9ULK4 1368 aa18.96■□□□□ 0.63
NR1H3-235ENST00000616973 NECTIN1Q15223 517 aa18.96■□□□□ 0.63
NR1H3-235ENST00000616973 TICAM2Q86XR7 235 aa18.96■□□□□ 0.63
NR1H3-235ENST00000616973 MAP4K1Q92918 833 aa18.96■□□□□ 0.63
NR1H3-235ENST00000616973 PLA2G12BQ9BX93 195 aa18.96■□□□□ 0.63
NR1H3-235ENST00000616973 MAP3K15Q6ZN16 1313 aa18.95■□□□□ 0.62
NR1H3-235ENST00000616973 PCCAP05165 728 aaPredicted RBP18.95■□□□□ 0.62
NR1H3-235ENST00000616973 FBXO3Q9UK99 471 aa18.95■□□□□ 0.62
NR1H3-235ENST00000616973 CHMP3Q9Y3E7 222 aa18.95■□□□□ 0.62
NR1H3-235ENST00000616973 EYA2O00167 538 aa18.94■□□□□ 0.62
NR1H3-235ENST00000616973 CYP19A1P11511 503 aaPredicted RBP18.94■□□□□ 0.62
NR1H3-235ENST00000616973 FAM227BQ96M60 508 aa18.94■□□□□ 0.62
NR1H3-235ENST00000616973 HAUS7Q99871 368 aa18.94■□□□□ 0.62
NR1H3-235ENST00000616973 DBNDD2Q9BQY9 259 aa18.94■□□□□ 0.62
NR1H3-235ENST00000616973 CICQ96RK0 1608 aaPredicted RBP18.94■□□□□ 0.62
NR1H3-235ENST00000616973 GIGYF2Q6Y7W6 1299 aaKnown RBP18.94■□□□□ 0.62
NR1H3-235ENST00000616973 ZDHHC9Q9Y397 364 aa18.94■□□□□ 0.62
NR1H3-235ENST00000616973 PKP1Q13835 747 aa18.93■□□□□ 0.62
NR1H3-235ENST00000616973 L1TD1Q5T7N2 865 aaKnown RBP18.93■□□□□ 0.62
NR1H3-235ENST00000616973 SLC4A9Q96Q91 983 aa18.93■□□□□ 0.62
NR1H3-235ENST00000616973 SPATA31A1Q5TZJ5 1347 aa18.93■□□□□ 0.62
NR1H3-235ENST00000616973 ZNF609O15014 1411 aa18.93■□□□□ 0.62
NR1H3-235ENST00000616973 A0A0D9SFI3 127 aa18.92■□□□□ 0.62
NR1H3-235ENST00000616973 HSP90AB3PQ58FF7 597 aa18.92■□□□□ 0.62
NR1H3-235ENST00000616973 ZBTB38Q8NAP3 1195 aaPredicted RBP18.92■□□□□ 0.62
NR1H3-235ENST00000616973 RBM8AQ9Y5S9 174 aaKnown RBP18.92■□□□□ 0.62
NR1H3-235ENST00000616973 FSD2A1L4K1 749 aa18.92■□□□□ 0.62
NR1H3-235ENST00000616973 PRPF40BQ6NWY9 871 aaKnown RBP18.92■□□□□ 0.62
NR1H3-235ENST00000616973 RREB1Q92766 1687 aa18.92■□□□□ 0.62
NR1H3-235ENST00000616973 CDHR2Q9BYE9 1310 aa18.92■□□□□ 0.62
NR1H3-235ENST00000616973 ZSWIM6Q9HCJ5 1215 aa18.92■□□□□ 0.62
NR1H3-235ENST00000616973 VPS53Q5VIR6 699 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms