RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 PTH1RQ03431 593 aa16.3■□□□□ 0.2
TNFRSF11A-205ENST00000616710 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
TNFRSF11A-205ENST00000616710 SH2B1Q9NRF2 756 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF11A-205ENST00000616710 PRDM15P57071 1507 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF11A-205ENST00000616710 PSMA5P28066 241 aa16.3■□□□□ 0.2
TNFRSF11A-205ENST00000616710 GSDMDP57764 484 aa16.3■□□□□ 0.2
TNFRSF11A-205ENST00000616710 DNAJC21Q5F1R6 531 aaKnown RBP16.3■□□□□ 0.2
TNFRSF11A-205ENST00000616710 BANK1Q8NDB2 785 aa16.3■□□□□ 0.2
TNFRSF11A-205ENST00000616710 POLKQ9UBT6 870 aa16.3■□□□□ 0.2
TNFRSF11A-205ENST00000616710 RBM8AQ9Y5S9 174 aaKnown RBP16.29■□□□□ 0.2
TNFRSF11A-205ENST00000616710 NUP160Q12769 1436 aa16.29■□□□□ 0.2
TNFRSF11A-205ENST00000616710 NOS1P29475 1434 aa16.29■□□□□ 0.2
TNFRSF11A-205ENST00000616710 AACSQ86V21 672 aa16.29■□□□□ 0.2
TNFRSF11A-205ENST00000616710 TOP1P11387 765 aaKnown RBP16.29■□□□□ 0.2
TNFRSF11A-205ENST00000616710 ICE2Q659A1 982 aa16.29■□□□□ 0.2
TNFRSF11A-205ENST00000616710 PPP1R13BQ96KQ4 1090 aa16.29■□□□□ 0.2
TNFRSF11A-205ENST00000616710 TPCN1Q9ULQ1 816 aa16.29■□□□□ 0.2
TNFRSF11A-205ENST00000616710 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
TNFRSF11A-205ENST00000616710 TRPM1Q7Z4N2 1603 aa16.28■□□□□ 0.2
TNFRSF11A-205ENST00000616710 FOXO3O43524 673 aa16.28■□□□□ 0.2
TNFRSF11A-205ENST00000616710 PLA2G4AP47712 749 aa16.28■□□□□ 0.2
TNFRSF11A-205ENST00000616710 PPP2R3AQ06190 1150 aa16.28■□□□□ 0.2
TNFRSF11A-205ENST00000616710 KIF4BQ2VIQ3 1234 aa16.28■□□□□ 0.2
TNFRSF11A-205ENST00000616710 FKBP15Q5T1M5 1219 aa16.28■□□□□ 0.2
TNFRSF11A-205ENST00000616710 PDE11AQ9HCR9 933 aa16.28■□□□□ 0.2
TNFRSF11A-205ENST00000616710 ADAM21Q9UKJ8 722 aa16.28■□□□□ 0.2
TNFRSF11A-205ENST00000616710 RTL1A6NKG5 1358 aa16.28■□□□□ 0.2
TNFRSF11A-205ENST00000616710 VGFO15240 615 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF11A-205ENST00000616710 SYCP1Q15431 976 aa16.27■□□□□ 0.2
TNFRSF11A-205ENST00000616710 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF11A-205ENST00000616710 FAM212AQ96EL1 285 aa16.27■□□□□ 0.2
TNFRSF11A-205ENST00000616710 RHPN1Q8TCX5 695 aa16.27■□□□□ 0.2
TNFRSF11A-205ENST00000616710 SLC26A8Q96RN1 970 aa16.27■□□□□ 0.2
TNFRSF11A-205ENST00000616710 RGS12O14924 1447 aa16.27■□□□□ 0.2
TNFRSF11A-205ENST00000616710 ERVK-7P63135 1459 aa16.27■□□□□ 0.19
TNFRSF11A-205ENST00000616710 E9PCH4 1651 aa16.27■□□□□ 0.19
TNFRSF11A-205ENST00000616710 RAPGEF3O95398 923 aa16.27■□□□□ 0.19
TNFRSF11A-205ENST00000616710 SYNE3Q6ZMZ3 975 aa16.27■□□□□ 0.19
TNFRSF11A-205ENST00000616710 SGSM2O43147 1006 aa16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 EIF3JO75822 258 aaKnown RBP16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 UBASH3AP57075 661 aa16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 CHST3Q7LGC8 479 aa16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 MYCBPQ99417 103 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 DESI2Q9BSY9 194 aa16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 VIRMAQ69YN4 1812 aaKnown RBP16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 RPAP1Q9BWH6 1393 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 LIG3P49916 1009 aa16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 FLIIQ13045 1269 aa16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 HYPKQ9NX55 129 aa16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 FHOD1Q9Y613 1164 aa16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 AIMP1Q12904 312 aaKnown RBP16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 TDRD7Q8NHU6 1098 aaKnown RBP16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
TNFRSF11A-205ENST00000616710 ZNF518AQ6AHZ1 1483 aa16.25■□□□□ 0.19
TNFRSF11A-205ENST00000616710 OTUD7BQ6GQQ9 843 aa16.25■□□□□ 0.19
TNFRSF11A-205ENST00000616710 FAM227BQ96M60 508 aa16.25■□□□□ 0.19
TNFRSF11A-205ENST00000616710 A0A1W2PP64 1363 aa16.25■□□□□ 0.19
TNFRSF11A-205ENST00000616710 ETF1P62495 437 aaKnown RBP16.25■□□□□ 0.19
TNFRSF11A-205ENST00000616710 PLA2G4DQ86XP0 818 aa16.25■□□□□ 0.19
TNFRSF11A-205ENST00000616710 FUCA2Q9BTY2 467 aa16.25■□□□□ 0.19
TNFRSF11A-205ENST00000616710 PA2G4Q9UQ80 394 aaKnown RBP16.25■□□□□ 0.19
TNFRSF11A-205ENST00000616710 DISP1Q96F81 1524 aa16.25■□□□□ 0.19
TNFRSF11A-205ENST00000616710 IFT140Q96RY7 1462 aa16.24■□□□□ 0.19
TNFRSF11A-205ENST00000616710 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
TNFRSF11A-205ENST00000616710 EIF4G3O43432 1585 aaKnown RBP16.24■□□□□ 0.19
TNFRSF11A-205ENST00000616710 NDUFB9Q9Y6M9 179 aa16.24■□□□□ 0.19
TNFRSF11A-205ENST00000616710 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
TNFRSF11A-205ENST00000616710 FAM107BQ9H098 131 aa16.24■□□□□ 0.19
TNFRSF11A-205ENST00000616710 EFCC1Q9HA90 598 aa16.24■□□□□ 0.19
TNFRSF11A-205ENST00000616710 ATP10BO94823 1461 aa16.24■□□□□ 0.19
TNFRSF11A-205ENST00000616710 CPLX1O14810 134 aa16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 RDXP35241 583 aaKnown RBP16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 CT47A1Q5JQC4 288 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 RAI14Q9P0K7 980 aa16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 ORC3Q9UBD5 711 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 ERLIN1O75477 346 aa16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 MARCKSP29966 332 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 HDGFL1Q5TGJ6 251 aa16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 FAN1Q9Y2M0 1017 aa16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 TMEM87AQ8NBN3 555 aa16.23■□□□□ 0.19
TNFRSF11A-205ENST00000616710 CREB3L3Q68CJ9 461 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 KLHL10Q6JEL2 608 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 CCDC150Q8NCX0 1101 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 KIF1BPQ96EK5 621 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 PGBD1Q96JS3 809 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 ZSCAN12O43309 604 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 LMOD2Q6P5Q4 547 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 SMARCC1Q92922 1105 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 CCP110O43303 1012 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 IVLP07476 585 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 TPM1P09493 284 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 PRR29P0C7W0 189 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 GIMAP7Q8NHV1 300 aa16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 NCOA5Q9HCD5 579 aaKnown RBP16.22■□□□□ 0.19
TNFRSF11A-205ENST00000616710 ACTN2P35609 894 aa16.21■□□□□ 0.19
TNFRSF11A-205ENST00000616710 AMPHP49418 695 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms