RNA–Protein interactions for RNA: ENST00000616568.4

PHF19-214, Transcript of PHD finger protein 19, humanhuman

TSL 1 (best) BASIC

Gene PHF19, Length 4,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-214ENST00000616568 PTCH1Q13635 1447 aa11.7□□□□□ -0.54
PHF19-214ENST00000616568 CPS1P31327 1500 aa11.7□□□□□ -0.54
PHF19-214ENST00000616568 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
PHF19-214ENST00000616568 IQSEC3Q9UPP2 1182 aaPredicted RBP11.7□□□□□ -0.54
PHF19-214ENST00000616568 MED14O60244 1454 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 ATP2B1P20020 1258 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 TIMM10P62072 90 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 IMMTQ16891 758 aaKnown RBP11.69□□□□□ -0.54
PHF19-214ENST00000616568 TTLL7Q6ZT98 887 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 CCDC34Q96HJ3 373 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 CDC5LQ99459 802 aaKnown RBP11.69□□□□□ -0.54
PHF19-214ENST00000616568 CDCA7Q9BWT1 371 aaPredicted RBP11.69□□□□□ -0.54
PHF19-214ENST00000616568 CIZ1Q9ULV3 898 aaPredicted RBP11.69□□□□□ -0.54
PHF19-214ENST00000616568 U3KPZ7 1027 aaPredicted RBP11.69□□□□□ -0.54
PHF19-214ENST00000616568 NRDCO43847 1150 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 NAP1L5Q96NT1 182 aaPredicted RBP11.69□□□□□ -0.54
PHF19-214ENST00000616568 KIAA1210Q9ULL0 1709 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 SAFBQ15424 915 aaKnown RBP eCLIP11.69□□□□□ -0.54
PHF19-214ENST00000616568 BEND3Q5T5X7 828 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 USP31Q70CQ4 1352 aa11.69□□□□□ -0.54
PHF19-214ENST00000616568 MARCH6O60337 910 aa11.68□□□□□ -0.54
PHF19-214ENST00000616568 BRPF1P55201 1214 aaPredicted RBP11.68□□□□□ -0.54
PHF19-214ENST00000616568 MAP3K12Q12852 859 aa11.68□□□□□ -0.54
PHF19-214ENST00000616568 TCEANC2Q96MN5 208 aa11.68□□□□□ -0.54
PHF19-214ENST00000616568 WDR33Q9C0J8 1336 aaKnown RBP11.68□□□□□ -0.54
PHF19-214ENST00000616568 CCDC152Q4G0S7 254 aa11.68□□□□□ -0.54
PHF19-214ENST00000616568 FERMT3Q86UX7 667 aa11.68□□□□□ -0.54
PHF19-214ENST00000616568 ZNF594Q96JF6 807 aaPredicted RBP11.68□□□□□ -0.54
PHF19-214ENST00000616568 SETDB2Q96T68 719 aa11.68□□□□□ -0.54
PHF19-214ENST00000616568 NEURL1BA8MQ27 555 aa11.68□□□□□ -0.54
PHF19-214ENST00000616568 ZSCAN31Q96LW9 406 aaPredicted RBP11.68□□□□□ -0.54
PHF19-214ENST00000616568 RICTORQ6R327 1708 aa11.68□□□□□ -0.54
PHF19-214ENST00000616568 CYP27B1O15528 508 aa11.68□□□□□ -0.54
PHF19-214ENST00000616568 HAND2P61296 217 aa11.68□□□□□ -0.54
PHF19-214ENST00000616568 UTP14AQ9BVJ6 771 aaKnown RBP11.68□□□□□ -0.54
PHF19-214ENST00000616568 MINDY4BA8MYZ0 360 aa11.67□□□□□ -0.54
PHF19-214ENST00000616568 HCLS1P14317 486 aaPredicted RBP11.67□□□□□ -0.54
PHF19-214ENST00000616568 CHMLP26374 656 aa11.67□□□□□ -0.54
PHF19-214ENST00000616568 CCDC191Q8NCU4 936 aa11.67□□□□□ -0.54
PHF19-214ENST00000616568 RNF214Q8ND24 703 aa11.67□□□□□ -0.54
PHF19-214ENST00000616568 VPS53Q5VIR6 699 aa11.67□□□□□ -0.54
PHF19-214ENST00000616568 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
PHF19-214ENST00000616568 NUP133Q8WUM0 1156 aa11.67□□□□□ -0.54
PHF19-214ENST00000616568 TTC41PQ6P2S7 1318 aa11.67□□□□□ -0.54
PHF19-214ENST00000616568 CREBRFQ8IUR6 639 aa11.67□□□□□ -0.54
PHF19-214ENST00000616568 NAPBQ9H115 298 aa11.67□□□□□ -0.54
PHF19-214ENST00000616568 TECPR2O15040 1411 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 SSFA2P28290 1259 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 RPGRQ92834 1020 aaKnown RBP11.66□□□□□ -0.54
PHF19-214ENST00000616568 USP21Q9UK80 565 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 LIMCH1Q9UPQ0 1083 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 LRRC7Q96NW7 1537 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 C1orf167Q5SNV9 1468 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 BECN2A8MW95 431 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 GNPATO15228 680 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 SLC3A2P08195 630 aaKnown RBP11.66□□□□□ -0.54
PHF19-214ENST00000616568 KIAA2012Q0VF49 1180 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 CCDC73Q6ZRK6 1079 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 NLRP3Q96P20 1036 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 DBNDD2Q9BQY9 259 aa11.66□□□□□ -0.54
PHF19-214ENST00000616568 RTCBQ9Y3I0 505 aaKnown RBP11.66□□□□□ -0.54
PHF19-214ENST00000616568 MYO3AQ8NEV4 1616 aa11.65□□□□□ -0.54
PHF19-214ENST00000616568 CDC42BPGQ6DT37 1551 aa11.65□□□□□ -0.54
PHF19-214ENST00000616568 CDK11BP21127 795 aaKnown RBP11.65□□□□□ -0.54
PHF19-214ENST00000616568 NMIQ13287 307 aaPredicted RBP11.65□□□□□ -0.54
PHF19-214ENST00000616568 SSH3Q8TE77 659 aa11.65□□□□□ -0.54
PHF19-214ENST00000616568 BCL11BQ9C0K0 894 aaPredicted RBP11.65□□□□□ -0.54
PHF19-214ENST00000616568 RBM8AQ9Y5S9 174 aaKnown RBP11.65□□□□□ -0.54
PHF19-214ENST00000616568 ZNF213O14771 459 aa11.65□□□□□ -0.54
PHF19-214ENST00000616568 PPFIA3O75145 1194 aa11.65□□□□□ -0.54
PHF19-214ENST00000616568 ANKRD18AQ8IVF6 992 aa11.65□□□□□ -0.54
PHF19-214ENST00000616568 SIRT2Q8IXJ6 389 aa11.65□□□□□ -0.54
PHF19-214ENST00000616568 PPLO60437 1756 aa11.65□□□□□ -0.54
PHF19-214ENST00000616568 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
PHF19-214ENST00000616568 NDUFB9Q9Y6M9 179 aa11.65□□□□□ -0.54
PHF19-214ENST00000616568 CCDC69A6NI79 296 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 EYA2O00167 538 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 MBD3O95983 291 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 UBAC1Q9BSL1 405 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 OVOS2A0A0J9YW53 1432 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 OVOS2Q6IE36 1432 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 C6orf229H3BNL8 230 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 PAG1Q9NWQ8 432 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 GOLGA6L19H0YKK7 550 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 TNPO1Q92973 898 aaKnown RBP11.64□□□□□ -0.55
PHF19-214ENST00000616568 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
PHF19-214ENST00000616568 BRPF3Q9ULD4 1205 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 SH3TC1Q8TE82 1336 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 TPM4P67936 248 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 TMX3Q96JJ7 454 aa11.64□□□□□ -0.55
PHF19-214ENST00000616568 A0A1B0GUL7 405 aa11.63□□□□□ -0.55
PHF19-214ENST00000616568 GSPT1P15170 499 aaKnown RBP11.63□□□□□ -0.55
PHF19-214ENST00000616568 ITGA6P23229 1130 aa11.63□□□□□ -0.55
PHF19-214ENST00000616568 RBM5P52756 815 aaKnown RBP eCLIP11.63□□□□□ -0.55
PHF19-214ENST00000616568 SDF4Q9BRK5 362 aa11.63□□□□□ -0.55
PHF19-214ENST00000616568 LRRC2Q9BYS8 371 aa11.63□□□□□ -0.55
PHF19-214ENST00000616568 CCDC87Q9NVE4 849 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms