RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	RBM6	P78332	1123 aa	Known RBP	18.21	■□□□□ 0.51
SYNRG-223	ENST00000616179	TTC31	Q49AM3	519 aa	Predicted RBP	18.21	■□□□□ 0.51
SYNRG-223	ENST00000616179	PUF60	Q9UHX1	559 aa	Known RBP	18.21	■□□□□ 0.51
SYNRG-223	ENST00000616179	CPLX1	O14810	134 aa		18.21	■□□□□ 0.51
SYNRG-223	ENST00000616179	JAKMIP3	Q5VZ66	844 aa		18.21	■□□□□ 0.51
SYNRG-223	ENST00000616179	TRAPPC8	Q9Y2L5	1435 aa		18.21	■□□□□ 0.51
SYNRG-223	ENST00000616179	TOP1	P11387	765 aa	Known RBP	18.21	■□□□□ 0.51
SYNRG-223	ENST00000616179	TMEM87A	Q8NBN3	555 aa		18.21	■□□□□ 0.51
SYNRG-223	ENST00000616179	HYPK	Q9NX55	129 aa		18.21	■□□□□ 0.51
SYNRG-223	ENST00000616179	PLXNC1	O60486	1568 aa		18.21	■□□□□ 0.51
SYNRG-223	ENST00000616179	KARS	Q15046	597 aa	Known RBP	18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	VPS53	Q5VIR6	699 aa		18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	CPLX3	Q8WVH0	158 aa		18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	FEZ2	Q9UHY8	353 aa	Predicted RBP	18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	TPCN1	Q9ULQ1	816 aa		18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	ST5	P78524	1137 aa		18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	SET	Q01105	290 aa	Predicted RBP	18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	NCBP3	Q53F19	620 aa	Known RBP	18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179		A0A1B0GVL5	298 aa		18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	TPM1	P09493	284 aa		18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	TAF7	Q15545	349 aa	Predicted RBP	18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	OLFM4	Q6UX06	510 aa		18.2	■□□□□ 0.5
SYNRG-223	ENST00000616179	TDRD7	Q8NHU6	1098 aa	Known RBP	18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	SMARCE1	Q969G3	411 aa		18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	RABEP2	Q9H5N1	569 aa		18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	MYO1C	O00159	1063 aa		18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	CTAGE5	O15320	804 aa		18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	EIF3J	O75822	258 aa	Known RBP	18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	SRRT	Q9BXP5	876 aa	Known RBP	18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	GOLGA8F	Q08AF8	430 aa		18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	GOLGA8DP	Q0D2H9	430 aa		18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	CREB3L3	Q68CJ9	461 aa		18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	RAB11FIP4	Q86YS3	637 aa		18.19	■□□□□ 0.5
SYNRG-223	ENST00000616179	E2F4	Q16254	413 aa		18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	NUTM2G	Q5VZR2	741 aa		18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	CCDC150	Q8NCX0	1101 aa		18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	XPO4	Q9C0E2	1151 aa	Known RBP	18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	CAVIN2	O95810	425 aa		18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	ATP2B1	P20020	1258 aa		18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	MNAT1	P51948	309 aa		18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	MICALL1	Q8N3F8	863 aa		18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	ZSCAN12	O43309	604 aa		18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	CYP2C19	P33261	490 aa		18.18	■□□□□ 0.5
SYNRG-223	ENST00000616179	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.17	■□□□□ 0.5
SYNRG-223	ENST00000616179	SLC3A2	P08195	630 aa	Known RBP	18.17	■□□□□ 0.5
SYNRG-223	ENST00000616179	UBASH3A	P57075	661 aa		18.17	■□□□□ 0.5
SYNRG-223	ENST00000616179	PLEKHA4	Q9H4M7	779 aa		18.17	■□□□□ 0.5
SYNRG-223	ENST00000616179	PA2G4	Q9UQ80	394 aa	Known RBP	18.17	■□□□□ 0.5
SYNRG-223	ENST00000616179	KIF4B	Q2VIQ3	1234 aa		18.17	■□□□□ 0.5
SYNRG-223	ENST00000616179	FAM227B	Q96M60	508 aa		18.17	■□□□□ 0.5
SYNRG-223	ENST00000616179	ABCC10	Q5T3U5	1492 aa		18.17	■□□□□ 0.5
SYNRG-223	ENST00000616179	ERLIN1	O75477	346 aa		18.17	■□□□□ 0.5
SYNRG-223	ENST00000616179	OSBPL3	Q9H4L5	887 aa		18.16	■□□□□ 0.5
SYNRG-223	ENST00000616179	ESF1	Q9H501	851 aa	Known RBP	18.16	■□□□□ 0.5
SYNRG-223	ENST00000616179	RHOXF2B	P0C7M4	288 aa		18.16	■□□□□ 0.5
SYNRG-223	ENST00000616179	PPP1R13B	Q96KQ4	1090 aa		18.16	■□□□□ 0.5
SYNRG-223	ENST00000616179	RHOXF2	Q9BQY4	288 aa		18.16	■□□□□ 0.5
SYNRG-223	ENST00000616179	ECHDC1	Q9NTX5	307 aa		18.16	■□□□□ 0.5
SYNRG-223	ENST00000616179	ACBD3	Q9H3P7	528 aa		18.16	■□□□□ 0.5
SYNRG-223	ENST00000616179	CFAP74	Q9C0B2	1584 aa		18.16	■□□□□ 0.5
SYNRG-223	ENST00000616179	AKAP17A	Q02040	695 aa	Known RBP	18.15	■□□□□ 0.5
SYNRG-223	ENST00000616179	TXNDC2	Q86VQ3	553 aa		18.15	■□□□□ 0.5
SYNRG-223	ENST00000616179	PLA2G4D	Q86XP0	818 aa		18.15	■□□□□ 0.5
SYNRG-223	ENST00000616179	RRP15	Q9Y3B9	282 aa	Known RBP	18.15	■□□□□ 0.5
SYNRG-223	ENST00000616179	NCKAP5L	Q9HCH0	1330 aa		18.15	■□□□□ 0.5
SYNRG-223	ENST00000616179	DUOX2	Q9NRD8	1548 aa		18.15	■□□□□ 0.5
SYNRG-223	ENST00000616179	NMI	Q13287	307 aa	Predicted RBP	18.15	■□□□□ 0.5
SYNRG-223	ENST00000616179	HSP90AB2P	Q58FF8	381 aa		18.15	■□□□□ 0.5
SYNRG-223	ENST00000616179	IQSEC2	Q5JU85	1478 aa		18.15	■□□□□ 0.5
SYNRG-223	ENST00000616179		A0A1B0GUL7	405 aa		18.14	■□□□□ 0.5
SYNRG-223	ENST00000616179	FUCA2	Q9BTY2	467 aa		18.14	■□□□□ 0.5
SYNRG-223	ENST00000616179	IL13	P35225	146 aa		18.14	■□□□□ 0.49
SYNRG-223	ENST00000616179	PPP2R3A	Q06190	1150 aa		18.14	■□□□□ 0.49
SYNRG-223	ENST00000616179	LZTFL1	Q9NQ48	299 aa		18.14	■□□□□ 0.49
SYNRG-223	ENST00000616179	LOC102724159	A0A0B4J2E5	919 aa		18.14	■□□□□ 0.49
SYNRG-223	ENST00000616179	ADAMTS12	P58397	1594 aa		18.14	■□□□□ 0.49
SYNRG-223	ENST00000616179	SART3	Q15020	963 aa	Known RBP	18.14	■□□□□ 0.49
SYNRG-223	ENST00000616179	PWP2	Q15269	919 aa	Known RBP	18.14	■□□□□ 0.49
SYNRG-223	ENST00000616179	LRRN4CL	Q8ND94	238 aa		18.14	■□□□□ 0.49
SYNRG-223	ENST00000616179	LSG1	Q9H089	658 aa	Known RBP	18.14	■□□□□ 0.49
SYNRG-223	ENST00000616179	ETF1	P62495	437 aa	Known RBP	18.13	■□□□□ 0.49
SYNRG-223	ENST00000616179	MRFAP1L1	Q96HT8	127 aa		18.13	■□□□□ 0.49
SYNRG-223	ENST00000616179	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	18.13	■□□□□ 0.49
SYNRG-223	ENST00000616179	DNAAF4	Q8WXU2	420 aa		18.13	■□□□□ 0.49
SYNRG-223	ENST00000616179	NEUROD6	Q96NK8	337 aa		18.13	■□□□□ 0.49
SYNRG-223	ENST00000616179	CENPH	Q9H3R5	247 aa		18.13	■□□□□ 0.49
SYNRG-223	ENST00000616179	RIMS2	Q9UQ26	1411 aa		18.13	■□□□□ 0.49
SYNRG-223	ENST00000616179		Q6ZUG5	572 aa		18.13	■□□□□ 0.49
SYNRG-223	ENST00000616179	CHST3	Q7LGC8	479 aa		18.13	■□□□□ 0.49
SYNRG-223	ENST00000616179	UGGT1	Q9NYU2	1555 aa		18.13	■□□□□ 0.49
SYNRG-223	ENST00000616179	SOS1	Q07889	1333 aa	Predicted RBP	18.12	■□□□□ 0.49
SYNRG-223	ENST00000616179	PTCH1	Q13635	1447 aa		18.12	■□□□□ 0.49
SYNRG-223	ENST00000616179	PHAX	Q9H814	394 aa	Known RBP	18.12	■□□□□ 0.49
SYNRG-223	ENST00000616179	CBFA2T2	O43439	604 aa		18.11	■□□□□ 0.49
SYNRG-223	ENST00000616179	IVL	P07476	585 aa		18.11	■□□□□ 0.49
SYNRG-223	ENST00000616179	LMOD2	Q6P5Q4	547 aa		18.11	■□□□□ 0.49
SYNRG-223	ENST00000616179	MARCKS	P29966	332 aa	Predicted RBP	18.11	■□□□□ 0.49
SYNRG-223	ENST00000616179	IDI1	Q13907	227 aa		18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms