RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 ARXQ96QS3 562 aa17.78■□□□□ 0.44
CDKN1A-208ENST00000615513 CCDC171Q6TFL3 1326 aa17.78■□□□□ 0.44
CDKN1A-208ENST00000615513 UBR2Q8IWV8 1755 aa17.77■□□□□ 0.44
CDKN1A-208ENST00000615513 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
CDKN1A-208ENST00000615513 GAS2L3Q86XJ1 694 aa17.77■□□□□ 0.44
CDKN1A-208ENST00000615513 KLHDC4Q8TBB5 520 aa17.77■□□□□ 0.44
CDKN1A-208ENST00000615513 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.44
CDKN1A-208ENST00000615513 LIMCH1Q9UPQ0 1083 aa17.77■□□□□ 0.44
CDKN1A-208ENST00000615513 STRCQ7RTU9 1775 aa17.77■□□□□ 0.44
CDKN1A-208ENST00000615513 NBPF26B4DH59 902 aa17.77■□□□□ 0.43
CDKN1A-208ENST00000615513 PTH1RQ03431 593 aa17.77■□□□□ 0.43
CDKN1A-208ENST00000615513 NBPF14Q5TI25 921 aa17.77■□□□□ 0.43
CDKN1A-208ENST00000615513 NBPF10Q6P3W6 841 aaKnown RBP17.77■□□□□ 0.43
CDKN1A-208ENST00000615513 NBPF15Q8N660 670 aa17.77■□□□□ 0.43
CDKN1A-208ENST00000615513 KCPQ6ZWJ8 1503 aa17.76■□□□□ 0.43
CDKN1A-208ENST00000615513 AFDNP55196 1824 aaKnown RBP17.76■□□□□ 0.43
CDKN1A-208ENST00000615513 ZNF445P59923 1031 aa17.76■□□□□ 0.43
CDKN1A-208ENST00000615513 NECTIN1Q15223 517 aa17.76■□□□□ 0.43
CDKN1A-208ENST00000615513 PANK2Q9BZ23 570 aa17.76■□□□□ 0.43
CDKN1A-208ENST00000615513 PAPPAQ13219 1627 aa17.76■□□□□ 0.43
CDKN1A-208ENST00000615513 ATP5J2-PTCD1G3V325 749 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 H7C1W4 665 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 PTCD1O75127 700 aaKnown RBP17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 ATP5JP18859 108 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 AK2P54819 239 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 VPS53Q5VIR6 699 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 MAP4K1Q92918 833 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 BOLA2Q9H3K6 86 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 TNS2Q63HR2 1409 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 PRPF40AO75400 957 aaKnown RBP17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 ZKSCAN1P17029 563 aaPredicted RBP17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 TNNI3KQ59H18 835 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 ABCA3Q99758 1704 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 WDR33Q9C0J8 1336 aaKnown RBP17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 FPGT-TNNI3KV9GXZ4 949 aa17.75■□□□□ 0.43
CDKN1A-208ENST00000615513 RFX7Q2KHR2 1363 aa17.74■□□□□ 0.43
CDKN1A-208ENST00000615513 CASTP20810 708 aaKnown RBP17.74■□□□□ 0.43
CDKN1A-208ENST00000615513 NMIQ13287 307 aaPredicted RBP17.74■□□□□ 0.43
CDKN1A-208ENST00000615513 FSD1Q9BTV5 496 aa17.74■□□□□ 0.43
CDKN1A-208ENST00000615513 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.74■□□□□ 0.43
CDKN1A-208ENST00000615513 ZNF335Q9H4Z2 1342 aaPredicted RBP17.74■□□□□ 0.43
CDKN1A-208ENST00000615513 PRPF40BQ6NWY9 871 aaKnown RBP17.74■□□□□ 0.43
CDKN1A-208ENST00000615513 RUFY3Q7L099 469 aa17.74■□□□□ 0.43
CDKN1A-208ENST00000615513 FAM227BQ96M60 508 aa17.74■□□□□ 0.43
CDKN1A-208ENST00000615513 MED23Q9ULK4 1368 aa17.73■□□□□ 0.43
CDKN1A-208ENST00000615513 ZSCAN31Q96LW9 406 aaPredicted RBP17.73■□□□□ 0.43
CDKN1A-208ENST00000615513 CWC25Q9NXE8 425 aaPredicted RBP17.73■□□□□ 0.43
CDKN1A-208ENST00000615513 CYP46A1Q9Y6A2 500 aa17.73■□□□□ 0.43
CDKN1A-208ENST00000615513 MBD3O95983 291 aa17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 TFCP2Q12800 502 aa17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 DBNLQ9UJU6 430 aaKnown RBP17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 JCADQ9P266 1359 aa17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 FOXO4P98177 505 aa17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 CREB3L3Q68CJ9 461 aa17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 CAVIN1Q6NZI2 390 aaKnown RBP17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 CCDC191Q8NCU4 936 aa17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 JARID2Q92833 1246 aaPredicted RBP17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 JAKMIP1Q96N16 626 aaKnown RBP17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 SH2B1Q9NRF2 756 aaPredicted RBP17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 PDRG1Q9NUG6 133 aa17.72■□□□□ 0.43
CDKN1A-208ENST00000615513 SHANK3Q9BYB0 1731 aa17.71■□□□□ 0.43
CDKN1A-208ENST00000615513 NCLP19338 710 aaKnown RBP17.71■□□□□ 0.43
CDKN1A-208ENST00000615513 PSMA5P28066 241 aa17.71■□□□□ 0.43
CDKN1A-208ENST00000615513 EVA1CP58658 441 aa17.71■□□□□ 0.43
CDKN1A-208ENST00000615513 ZSCAN23Q3MJ62 389 aa17.71■□□□□ 0.43
CDKN1A-208ENST00000615513 LMBR1LQ6UX01 489 aa17.71■□□□□ 0.43
CDKN1A-208ENST00000615513 TTLL7Q6ZT98 887 aa17.71■□□□□ 0.43
CDKN1A-208ENST00000615513 GPT2Q8TD30 523 aa17.71■□□□□ 0.43
CDKN1A-208ENST00000615513 NUP188Q5SRE5 1749 aa17.71■□□□□ 0.43
CDKN1A-208ENST00000615513 A0A0D9SFI3 127 aa17.71■□□□□ 0.42
CDKN1A-208ENST00000615513 ADCK5Q3MIX3 580 aa17.71■□□□□ 0.42
CDKN1A-208ENST00000615513 RNF20Q5VTR2 975 aa17.71■□□□□ 0.42
CDKN1A-208ENST00000615513 DDX54Q8TDD1 881 aaKnown RBP17.71■□□□□ 0.42
CDKN1A-208ENST00000615513 A1BGP04217 495 aa17.7■□□□□ 0.42
CDKN1A-208ENST00000615513 PRKCSHP14314 528 aaPredicted RBP17.7■□□□□ 0.42
CDKN1A-208ENST00000615513 KCNJ4P48050 445 aa17.7■□□□□ 0.42
CDKN1A-208ENST00000615513 GPR108Q9NPR9 543 aa17.7■□□□□ 0.42
CDKN1A-208ENST00000615513 RPAP1Q9BWH6 1393 aaPredicted RBP17.7■□□□□ 0.42
CDKN1A-208ENST00000615513 NHSL1Q5SYE7 1610 aa17.7■□□□□ 0.42
CDKN1A-208ENST00000615513 FOXD4L5Q5VV16 416 aaPredicted RBP17.69■□□□□ 0.42
CDKN1A-208ENST00000615513 TICAM2Q86XR7 235 aa17.69■□□□□ 0.42
CDKN1A-208ENST00000615513 FOXD4L4Q8WXT5 416 aaPredicted RBP17.69■□□□□ 0.42
CDKN1A-208ENST00000615513 STRN4Q9NRL3 753 aa17.69■□□□□ 0.42
CDKN1A-208ENST00000615513 HMG20BQ9P0W2 317 aa17.69■□□□□ 0.42
CDKN1A-208ENST00000615513 SLC27A2O14975 620 aa17.69■□□□□ 0.42
CDKN1A-208ENST00000615513 ATG3Q9NT62 314 aa17.69■□□□□ 0.42
CDKN1A-208ENST00000615513 TSGA10IPQ3SY00 556 aa17.68■□□□□ 0.42
CDKN1A-208ENST00000615513 HAUS7Q99871 368 aa17.68■□□□□ 0.42
CDKN1A-208ENST00000615513 ALDH8A1Q9H2A2 487 aaPredicted RBP17.68■□□□□ 0.42
CDKN1A-208ENST00000615513 SMC3Q9UQE7 1217 aa17.68■□□□□ 0.42
CDKN1A-208ENST00000615513 VSIG10Q8N0Z9 540 aa17.68■□□□□ 0.42
CDKN1A-208ENST00000615513 TEX13AQ9BXU3 409 aaPredicted RBP17.68■□□□□ 0.42
CDKN1A-208ENST00000615513 CPA1P15085 419 aa17.67■□□□□ 0.42
CDKN1A-208ENST00000615513 IL15P40933 162 aaPredicted RBP17.67■□□□□ 0.42
CDKN1A-208ENST00000615513 DBNDD2Q9BQY9 259 aa17.67■□□□□ 0.42
CDKN1A-208ENST00000615513 RRAGDQ9NQL2 400 aaPredicted RBP17.67■□□□□ 0.42
CDKN1A-208ENST00000615513 TMOD3Q9NYL9 352 aa17.67■□□□□ 0.42
CDKN1A-208ENST00000615513 TAF5LO75529 589 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms