RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 CRY2Q49AN0 593 aa12.89□□□□□ -0.35
SNX9-202ENST00000614703 NIM1KQ8IY84 436 aa12.89□□□□□ -0.35
SNX9-202ENST00000614703 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
SNX9-202ENST00000614703 MCOLN1Q9GZU1 580 aa12.89□□□□□ -0.35
SNX9-202ENST00000614703 CASP8AP2Q9UKL3 1982 aa12.89□□□□□ -0.35
SNX9-202ENST00000614703 TNRC18O15417 2968 aaPredicted RBP12.88□□□□□ -0.35
SNX9-202ENST00000614703 HOXA10P31260 410 aaPredicted RBP12.88□□□□□ -0.35
SNX9-202ENST00000614703 EPS15P42566 896 aa12.88□□□□□ -0.35
SNX9-202ENST00000614703 CST9Q5W186 159 aa12.88□□□□□ -0.35
SNX9-202ENST00000614703 SAPCD2Q86UD0 394 aa12.88□□□□□ -0.35
SNX9-202ENST00000614703 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
SNX9-202ENST00000614703 SNED1Q8TER0 1413 aa12.88□□□□□ -0.35
SNX9-202ENST00000614703 KCNQ3O43525 872 aa12.87□□□□□ -0.35
SNX9-202ENST00000614703 AOC2O75106 756 aa12.87□□□□□ -0.35
SNX9-202ENST00000614703 CELF2O95319 508 aaKnown RBP12.87□□□□□ -0.35
SNX9-202ENST00000614703 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
SNX9-202ENST00000614703 RBM17Q96I25 401 aaKnown RBP12.87□□□□□ -0.35
SNX9-202ENST00000614703 LTBP1Q14766 1721 aa12.87□□□□□ -0.35
SNX9-202ENST00000614703 KIF7Q2M1P5 1343 aa12.87□□□□□ -0.35
SNX9-202ENST00000614703 CDHR2Q9BYE9 1310 aa12.87□□□□□ -0.35
SNX9-202ENST00000614703 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
SNX9-202ENST00000614703 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
SNX9-202ENST00000614703 TRAF5O00463 557 aa12.86□□□□□ -0.35
SNX9-202ENST00000614703 TRIM26Q12899 539 aaPredicted RBP12.86□□□□□ -0.35
SNX9-202ENST00000614703 NOGQ13253 232 aa12.86□□□□□ -0.35
SNX9-202ENST00000614703 DGKZQ13574 1117 aa12.86□□□□□ -0.35
SNX9-202ENST00000614703 SUPT20HQ8NEM7 779 aa12.86□□□□□ -0.35
SNX9-202ENST00000614703 ZC3H15Q8WU90 426 aaKnown RBP12.86□□□□□ -0.35
SNX9-202ENST00000614703 CRAMP1Q96RY5 1269 aa12.86□□□□□ -0.35
SNX9-202ENST00000614703 GPRC5DQ9NZD1 345 aa12.86□□□□□ -0.35
SNX9-202ENST00000614703 TSKSQ9UJT2 592 aa12.86□□□□□ -0.35
SNX9-202ENST00000614703 PPEF1O14829 653 aaPredicted RBP12.85□□□□□ -0.35
SNX9-202ENST00000614703 PPIP5K2O43314 1243 aa12.85□□□□□ -0.35
SNX9-202ENST00000614703 CC2D1BQ5T0F9 858 aaKnown RBP12.85□□□□□ -0.35
SNX9-202ENST00000614703 CFAP53Q96M91 514 aa12.85□□□□□ -0.35
SNX9-202ENST00000614703 NUDCQ9Y266 331 aa12.85□□□□□ -0.35
SNX9-202ENST00000614703 NUP98P52948 1817 aa12.85□□□□□ -0.35
SNX9-202ENST00000614703 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
SNX9-202ENST00000614703 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
SNX9-202ENST00000614703 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
SNX9-202ENST00000614703 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNX9-202ENST00000614703 HLFQ16534 295 aa12.84□□□□□ -0.35
SNX9-202ENST00000614703 NBPF10Q6P3W6 841 aaKnown RBP12.84□□□□□ -0.35
SNX9-202ENST00000614703 KIF6Q6ZMV9 814 aa12.84□□□□□ -0.35
SNX9-202ENST00000614703 NBPF15Q8N660 670 aa12.84□□□□□ -0.35
SNX9-202ENST00000614703 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
SNX9-202ENST00000614703 NPC1L1Q9UHC9 1359 aa12.83□□□□□ -0.36
SNX9-202ENST00000614703 PRAMEF22A3QJZ6 481 aa12.83□□□□□ -0.36
SNX9-202ENST00000614703 PER1O15534 1290 aaPredicted RBP12.83□□□□□ -0.36
SNX9-202ENST00000614703 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
SNX9-202ENST00000614703 CDC37L1Q7L3B6 337 aa12.83□□□□□ -0.36
SNX9-202ENST00000614703 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
SNX9-202ENST00000614703 PGAP2Q9UHJ9 254 aa12.83□□□□□ -0.36
SNX9-202ENST00000614703 ZNRF3Q9ULT6 936 aa12.83□□□□□ -0.36
SNX9-202ENST00000614703 COL4A5P29400 1685 aa12.83□□□□□ -0.36
SNX9-202ENST00000614703 ABCC12Q96J65 1359 aa12.82□□□□□ -0.36
SNX9-202ENST00000614703 TNIP1Q15025 636 aa12.82□□□□□ -0.36
SNX9-202ENST00000614703 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
SNX9-202ENST00000614703 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
SNX9-202ENST00000614703 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
SNX9-202ENST00000614703 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
SNX9-202ENST00000614703 BCL2L13Q9BXK5 485 aa12.82□□□□□ -0.36
SNX9-202ENST00000614703 RSPH6AQ9H0K4 717 aa12.82□□□□□ -0.36
SNX9-202ENST00000614703 SAGE1Q9NXZ1 904 aa12.82□□□□□ -0.36
SNX9-202ENST00000614703 MAP3K15Q6ZN16 1313 aa12.82□□□□□ -0.36
SNX9-202ENST00000614703 CXCL9Q07325 125 aa12.81□□□□□ -0.36
SNX9-202ENST00000614703 TAF7Q15545 349 aaPredicted RBP12.81□□□□□ -0.36
SNX9-202ENST00000614703 GLIS2Q9BZE0 524 aaPredicted RBP12.81□□□□□ -0.36
SNX9-202ENST00000614703 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
SNX9-202ENST00000614703 ATP6V0A2Q9Y487 856 aa12.81□□□□□ -0.36
SNX9-202ENST00000614703 H7C1D1 291 aa12.8□□□□□ -0.36
SNX9-202ENST00000614703 GMPSP49915 693 aaPredicted RBP12.8□□□□□ -0.36
SNX9-202ENST00000614703 HUNKP57058 714 aa12.8□□□□□ -0.36
SNX9-202ENST00000614703 AOC3Q16853 763 aa12.8□□□□□ -0.36
SNX9-202ENST00000614703 PARP10Q53GL7 1025 aa12.8□□□□□ -0.36
SNX9-202ENST00000614703 MCM10Q7L590 875 aa12.8□□□□□ -0.36
SNX9-202ENST00000614703 PNISRQ8TF01 805 aaKnown RBP12.8□□□□□ -0.36
SNX9-202ENST00000614703 TCERG1O14776 1098 aaKnown RBP12.79□□□□□ -0.36
SNX9-202ENST00000614703 BBOX1O75936 387 aa12.79□□□□□ -0.36
SNX9-202ENST00000614703 NEFMP07197 916 aa12.79□□□□□ -0.36
SNX9-202ENST00000614703 DPP8Q6V1X1 898 aaPredicted RBP12.79□□□□□ -0.36
SNX9-202ENST00000614703 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
SNX9-202ENST00000614703 CCDC102AQ96A19 550 aa12.79□□□□□ -0.36
SNX9-202ENST00000614703 RTFDC1Q9BY42 306 aaPredicted RBP12.79□□□□□ -0.36
SNX9-202ENST00000614703 AKAP11Q9UKA4 1901 aa12.79□□□□□ -0.36
SNX9-202ENST00000614703 GPTP24298 496 aa12.78□□□□□ -0.36
SNX9-202ENST00000614703 PRPF38BQ5VTL8 546 aaKnown RBP12.78□□□□□ -0.36
SNX9-202ENST00000614703 C2orf69Q8N8R5 385 aa12.78□□□□□ -0.36
SNX9-202ENST00000614703 NTSR2O95665 410 aa12.77□□□□□ -0.37
SNX9-202ENST00000614703 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
SNX9-202ENST00000614703 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.371e-8■■□□□ 13
SNX9-202ENST00000614703 KIAA2012Q0VF49 1180 aa12.77□□□□□ -0.37
SNX9-202ENST00000614703 SUSD4Q5VX71 490 aa12.77□□□□□ -0.37
SNX9-202ENST00000614703 RGMBQ6NW40 437 aa12.77□□□□□ -0.37
SNX9-202ENST00000614703 GIGYF2Q6Y7W6 1299 aaKnown RBP12.77□□□□□ -0.37
SNX9-202ENST00000614703 TMC4Q7Z404 712 aa12.77□□□□□ -0.37
SNX9-202ENST00000614703 SP8Q8IXZ3 490 aa12.77□□□□□ -0.37
SNX9-202ENST00000614703 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
SNX9-202ENST00000614703 ZNF34Q8IZ26 560 aa12.77□□□□□ -0.37
SNX9-202ENST00000614703 MPNDQ8N594 471 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms