RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ECHDC1Q9NTX5 307 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 TRMT112Q9UI30 125 aaKnown RBP4.19□□□□□ -1.74
LIG4-205ENST00000614526 PALD1Q9ULE6 856 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 UTYO14607 1347 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 HCLS1P14317 486 aaPredicted RBP4.19□□□□□ -1.74
LIG4-205ENST00000614526 CRKLP46109 303 aaKnown RBP4.19□□□□□ -1.74
LIG4-205ENST00000614526 CASP7P55210 303 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 STAP2Q9UGK3 403 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 BCL9O00512 1426 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 GOLGB1Q14789 3259 aaKnown RBP4.19□□□□□ -1.74
LIG4-205ENST00000614526 REC8O95072 547 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 RFX5P48382 616 aaPredicted RBP4.19□□□□□ -1.74
LIG4-205ENST00000614526 CCDC57Q2TAC2 916 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 ERC1Q8IUD2 1116 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 CNTROBQ8N137 903 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 CCDC191Q8NCU4 936 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 HELBQ8NG08 1087 aaPredicted RBP4.19□□□□□ -1.74
LIG4-205ENST00000614526 CERKQ8TCT0 537 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 FAM227BQ96M60 508 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 TEX13AQ9BXU3 409 aaPredicted RBP4.19□□□□□ -1.74
LIG4-205ENST00000614526 SNRKQ9NRH2 765 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 DIAPH3Q9NSV4 1193 aa4.19□□□□□ -1.74
LIG4-205ENST00000614526 DBNLQ9UJU6 430 aaKnown RBP4.19□□□□□ -1.74
LIG4-205ENST00000614526 SIPA1L3O60292 1781 aaPredicted RBP4.18□□□□□ -1.74
LIG4-205ENST00000614526 ABCA3Q99758 1704 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 CACNA1FO60840 1977 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 SNAP23O00161 211 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 GLRX3O76003 335 aaKnown RBP4.18□□□□□ -1.74
LIG4-205ENST00000614526 CPA1P15085 419 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 NEK4P51957 841 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 FOXD4L5Q5VV16 416 aaPredicted RBP4.18□□□□□ -1.74
LIG4-205ENST00000614526 DDX46Q7L014 1031 aaKnown RBP4.18□□□□□ -1.74
LIG4-205ENST00000614526 FOXD4L4Q8WXT5 416 aaPredicted RBP4.18□□□□□ -1.74
LIG4-205ENST00000614526 GPATCH3Q96I76 525 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 FSD1Q9BTV5 496 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 KCPQ6ZWJ8 1503 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 MRC1P22897 1456 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 PHLPP1O60346 1717 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 PKD1L3Q7Z443 1732 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 DISP2A7MBM2 1401 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 MAP3K15Q6ZN16 1313 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 ADRA2BP18089 450 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 TNNI3KQ59H18 835 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 GIGYF2Q6Y7W6 1299 aaKnown RBP4.18□□□□□ -1.74
LIG4-205ENST00000614526 FPGT-TNNI3KV9GXZ4 949 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 ERBB4Q15303 1308 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 IRS4O14654 1257 aaPredicted RBP4.18□□□□□ -1.74
LIG4-205ENST00000614526 KCNJ4P48050 445 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 INTS5Q6P9B9 1019 aaKnown RBP4.18□□□□□ -1.74
LIG4-205ENST00000614526 NLRP10Q86W26 655 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 VSIG10Q8N0Z9 540 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 ISCA1Q9BUE6 129 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 GREM2Q9H772 168 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 COPRSQ9NQ92 184 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 CCDC87Q9NVE4 849 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 THRAP3Q9Y2W1 955 aaKnown RBP4.18□□□□□ -1.74
LIG4-205ENST00000614526 ADAMTS7Q9UKP4 1686 aa4.18□□□□□ -1.74
LIG4-205ENST00000614526 COL16A1Q07092 1604 aaPredicted RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 PARP4Q9UKK3 1724 aaKnown RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 ABCC6O95255 1503 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 PHF14O94880 888 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 FKBP4Q02790 459 aaKnown RBP eCLIP4.17□□□□□ -1.74
LIG4-205ENST00000614526 PTH1RQ03431 593 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 IFIT5Q13325 482 aaKnown RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 RABL6Q3YEC7 729 aaPredicted RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 GORABQ5T7V8 394 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 KIAA1211Q6ZU35 1233 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 ATG9AQ7Z3C6 839 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 SEC62Q99442 399 aaKnown RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 CDCA7Q9BWT1 371 aaPredicted RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 NIP7Q9Y221 180 aaKnown RBP eCLIP4.17□□□□□ -1.74
LIG4-205ENST00000614526 PALLDQ8WX93 1383 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 AFF2P51816 1311 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 UBN2Q6ZU65 1347 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 AHDC1Q5TGY3 1603 aaPredicted RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 ITGA6P23229 1130 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 ADORA1P30542 326 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 NMIQ13287 307 aaPredicted RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 SUSD4Q5VX71 490 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 PI16Q6UXB8 463 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 LDHAL6AQ6ZMR3 332 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 CCDC129Q6ZRS4 1044 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 ZBTB38Q8NAP3 1195 aaPredicted RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 CNNM1Q9NRU3 951 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 TNS2Q63HR2 1409 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 JCADQ9P266 1359 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 COL14A1Q05707 1796 aaKnown RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 TOGARAM1Q9Y4F4 1720 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 A0A0D9SFI3 127 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 A0A1B0GUL7 405 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 K7ELQ4 463 aaPredicted RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 EYA2O00167 538 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 GOLIM4O00461 696 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 VPS72Q15906 364 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 HSP90AB3PQ58FF7 597 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 PRPF40BQ6NWY9 871 aaKnown RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 BARGINQ6ZT62 677 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 RASEFQ8IZ41 740 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 ZGPATQ8N5A5 531 aaKnown RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 LINC00116Q8NCU8 138 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms