RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-222	ENST00000613916	TTLL7	Q6ZT98	887 aa		9.21	□□□□□ -0.94
PVT1-222	ENST00000613916	ANKRD44	Q8N8A2	993 aa		9.21	□□□□□ -0.94
PVT1-222	ENST00000613916	METTL22	Q9BUU2	404 aa	Predicted RBP	9.21	□□□□□ -0.94
PVT1-222	ENST00000613916	ARFGEF1	Q9Y6D6	1849 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	ALDH1L1	O75891	902 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	DDX58	O95786	925 aa	Known RBP	9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	GNAI3	P08754	354 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	SSFA2	P28290	1259 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	ITPK1	Q13572	414 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	CWF19L2	Q2TBE0	894 aa	Known RBP	9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	ANKRD13D	Q6ZTN6	518 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	RIC3	Q7Z5B4	369 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	LINS1	Q8NG48	757 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	PLBD2	Q8NHP8	589 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	WWC3	Q9ULE0	1092 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	PDZRN3	Q9UPQ7	1066 aa		9.2	□□□□□ -0.94
PVT1-222	ENST00000613916	C4A	P0C0L4	1744 aa		9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	LOC102724428	A0A0B4J2F2	783 aa		9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	NEURL1B	A8MQ27	555 aa		9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	STARD3NL	O95772	234 aa		9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	NBPF7	P0C2Y1	421 aa	Predicted RBP	9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	SIK1	P57059	783 aa		9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	RPAP2	Q8IXW5	612 aa	Predicted RBP	9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	SMARCC1	Q92922	1105 aa	Predicted RBP	9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	AK7	Q96M32	723 aa		9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	LRRFIP2	Q9Y608	721 aa	Known RBP	9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	UTY	O14607	1347 aa		9.19	□□□□□ -0.94
PVT1-222	ENST00000613916	GNAI2	P04899	355 aa		9.18	□□□□□ -0.94
PVT1-222	ENST00000613916	TGFB2	P61812	414 aa		9.18	□□□□□ -0.94
PVT1-222	ENST00000613916	SCN7A	Q01118	1682 aa		9.18	□□□□□ -0.94
PVT1-222	ENST00000613916	AK9	Q5TCS8	1911 aa		9.18	□□□□□ -0.94
PVT1-222	ENST00000613916	INTS5	Q6P9B9	1019 aa	Known RBP	9.18	□□□□□ -0.94
PVT1-222	ENST00000613916	MYD88	Q99836	296 aa		9.18	□□□□□ -0.94
PVT1-222	ENST00000613916	DCTPP1	Q9H773	170 aa		9.18	□□□□□ -0.94
PVT1-222	ENST00000613916	ZBTB1	Q9Y2K1	713 aa		9.18	□□□□□ -0.94
PVT1-222	ENST00000613916	LAMB2	P55268	1798 aa		9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	DDX60	Q8IY21	1712 aa	Known RBP	9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	PNMA6E	A0A0J9YXQ4	647 aa		9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	UBTFL1	P0CB47	393 aa	Predicted RBP	9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	PDE4A	P27815	886 aa		9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	ATP6V1A	P38606	617 aa		9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	ATP8B2	P98198	1209 aa		9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	NUCB1	Q02818	461 aa		9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	GCKR	Q14397	625 aa		9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	C16orf71	Q8IYS4	520 aa	Predicted RBP	9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	KAZALD1	Q96I82	304 aa		9.17	□□□□□ -0.94
PVT1-222	ENST00000613916	GRM8	O00222	908 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	PHF14	O94880	888 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	HSPA1A	P0DMV8	641 aa	Known RBP	9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	HSPA1B	P0DMV9	641 aa	Known RBP	9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	IL6ST	P40189	918 aa	Predicted RBP	9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	CRKL	P46109	303 aa	Known RBP	9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	EIF5	P55010	431 aa	Known RBP	9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	CASP7	P55210	303 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	POLA2	Q14181	598 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	LINC00116	Q8NCU8	138 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	GCC1	Q96CN9	775 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	ISCA1	Q9BUE6	129 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	ZBTB3	Q9H5J0	574 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	TSHZ2	Q9NRE2	1034 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	CCDC87	Q9NVE4	849 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	BCS1L	Q9Y276	419 aa		9.16	□□□□□ -0.94
PVT1-222	ENST00000613916	COL15A1	P39059	1388 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	MAP3K15	Q6ZN16	1313 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	ATP5J2-PTCD1	G3V325	749 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	MMP10	P09238	476 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	RGS3	P49796	1198 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	NEXN	Q0ZGT2	675 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	MTX1	Q13505	466 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	C9orf131	Q5VYM1	1079 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	SMIM5	Q71RC9	77 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	SMC1B	Q8NDV3	1235 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	SSH3	Q8TE77	659 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	SUCLG2	Q96I99	432 aa		9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	C9orf78	Q9NZ63	289 aa	Predicted RBP	9.15	□□□□□ -0.94
PVT1-222	ENST00000613916	SPEF2	Q9C093	1822 aa		9.15	□□□□□ -0.95
PVT1-222	ENST00000613916		H7C1W4	665 aa		9.14	□□□□□ -0.95
PVT1-222	ENST00000613916	TRIM28	Q13263	835 aa	Known RBP	9.14	□□□□□ -0.95
PVT1-222	ENST00000613916	TCIRG1	Q13488	830 aa		9.14	□□□□□ -0.95
PVT1-222	ENST00000613916	HLF	Q16534	295 aa		9.14	□□□□□ -0.95
PVT1-222	ENST00000613916	GIGYF2	Q6Y7W6	1299 aa	Known RBP	9.14	□□□□□ -0.95
PVT1-222	ENST00000613916	ARHGAP27	Q6ZUM4	889 aa		9.14	□□□□□ -0.95
PVT1-222	ENST00000613916	PPP1R42	Q7Z4L9	355 aa		9.14	□□□□□ -0.95
PVT1-222	ENST00000613916	CHD1L	Q86WJ1	897 aa		9.14	□□□□□ -0.95
PVT1-222	ENST00000613916	TAF1	P21675	1872 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	CNTNAP4	Q9C0A0	1308 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	ZC3H4	Q9UPT8	1303 aa	Known RBP	9.13	□□□□□ -0.95
PVT1-222	ENST00000613916		A0A0G2JLW4	131 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	ERVV-1	B6SEH8	477 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	HMMR	O75330	724 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	KCNA3	P22001	575 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	EPHA10	Q5JZY3	1008 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	ANKRD45	Q5TZF3	282 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	KIF6	Q6ZMV9	814 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	CCDC191	Q8NCU4	936 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	JARID2	Q92833	1246 aa	Predicted RBP	9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	LNPK	Q9C0E8	428 aa		9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	BICC1	Q9H694	974 aa	Known RBP	9.13	□□□□□ -0.95
PVT1-222	ENST00000613916	ZNF330	Q9Y3S2	320 aa	Predicted RBP	9.13	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms