RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 CNNM3Q8NE01 707 aa14.52□□□□□ -0.08
TNFAIP3-206ENST00000612899 RPGRQ92834 1020 aaKnown RBP14.52□□□□□ -0.08
TNFAIP3-206ENST00000612899 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.08
TNFAIP3-206ENST00000612899 KLHL40Q2TBA0 621 aa14.52□□□□□ -0.08
TNFAIP3-206ENST00000612899 NLRP5P59047 1200 aa14.52□□□□□ -0.09
TNFAIP3-206ENST00000612899 CATIPQ7Z7H3 387 aa14.52□□□□□ -0.09
TNFAIP3-206ENST00000612899 NCOA7Q8NI08 942 aa14.52□□□□□ -0.09
TNFAIP3-206ENST00000612899 SLC4A8Q2Y0W8 1093 aa14.51□□□□□ -0.09
TNFAIP3-206ENST00000612899 CCDC194A0A1B0GVG4 234 aa14.51□□□□□ -0.09
TNFAIP3-206ENST00000612899 ZHX1Q9UKY1 873 aaPredicted RBP14.51□□□□□ -0.09
TNFAIP3-206ENST00000612899 ATP2B3Q16720 1220 aa14.51□□□□□ -0.09
TNFAIP3-206ENST00000612899 SEC24BO95487 1268 aa14.51□□□□□ -0.09
TNFAIP3-206ENST00000612899 MFSD6Q6ZSS7 791 aa14.51□□□□□ -0.09
TNFAIP3-206ENST00000612899 PHAXQ9H814 394 aaKnown RBP14.51□□□□□ -0.09
TNFAIP3-206ENST00000612899 CTAGE5O15320 804 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 ZNF165P49910 485 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 METAP2P50579 478 aaKnown RBP eCLIP14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 CLIP2Q9UDT6 1046 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 MSH6P52701 1360 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 CCDC96Q2M329 555 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 ACSBG1Q96GR2 724 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 SEPT11Q9NVA2 429 aaKnown RBP14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 CTTNBP2Q8WZ74 1663 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 KLF18A0A0U1RQI7 1052 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 TSPY2A6NKD2 308 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 UBE2HP62256 183 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 PTPN14Q15678 1187 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 FBXO3Q9UK99 471 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 MYO6Q9UM54 1294 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 HCLS1P14317 486 aaPredicted RBP14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 ADAMTS12P58397 1594 aa14.5□□□□□ -0.09
TNFAIP3-206ENST00000612899 MCM5P33992 734 aa14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 ISM2Q6H9L7 571 aa14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 HOMEZQ8IX15 550 aa14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 SLC26A6Q9BXS9 759 aa14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 ZSCAN22P10073 491 aaPredicted RBP14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 GIMAP6Q6P9H5 292 aa14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 G2E3Q7L622 706 aa14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 UBXN4Q92575 508 aa14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 TOP1P11387 765 aaKnown RBP14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 KIAA1328Q86T90 577 aa14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.49□□□□□ -0.097e-6■■■■■ 74.5
TNFAIP3-206ENST00000612899 YTHDC2Q9H6S0 1430 aaKnown RBP14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 PLEKHM2Q8IWE5 1019 aa14.49□□□□□ -0.09
TNFAIP3-206ENST00000612899 IL15P40933 162 aaPredicted RBP14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 ANAPC15P60006 121 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 VAT1LQ9HCJ6 419 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 ARHGEF12Q9NZN5 1544 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 C19orf44Q9H6X5 657 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 ABCC1P33527 1531 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 SHANK2Q9UPX8 1470 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 UQCRFS1P1P0C7P4 283 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 HOXC9P31274 260 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 CLCN1P35523 988 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 CPLX3Q8WVH0 158 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 TRMT1Q9NXH9 659 aaKnown RBP14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 ZMYM3Q14202 1370 aa14.48□□□□□ -0.09
TNFAIP3-206ENST00000612899 BRD2P25440 801 aaKnown RBP14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 MCMDC2Q4G0Z9 681 aa14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 ADCY5O95622 1261 aa14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 NBPF6Q5VWK0 638 aa14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 NBPF5PQ86XG9 351 aaPredicted RBP14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 NBPF4Q96M43 638 aa14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 STX8Q9UNK0 236 aa14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 COL17A1Q9UMD9 1497 aaPredicted RBP14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 ZBTB7BO15156 539 aaPredicted RBP14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 RDXP35241 583 aaKnown RBP14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 CCDC152Q4G0S7 254 aa14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 TEX14Q8IWB6 1497 aa14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 ERLIN1O75477 346 aa14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 LDHCP07864 332 aa14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 ZFYP08048 801 aaPredicted RBP14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 NMIQ13287 307 aaPredicted RBP14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 SLC9C2Q5TAH2 1124 aa14.47□□□□□ -0.09
TNFAIP3-206ENST00000612899 ZSCAN23Q3MJ62 389 aa14.46□□□□□ -0.09
TNFAIP3-206ENST00000612899 TXLNBQ8N3L3 684 aa14.46□□□□□ -0.09
TNFAIP3-206ENST00000612899 CNPY2Q9Y2B0 182 aa14.46□□□□□ -0.09
TNFAIP3-206ENST00000612899 MAP3K5Q99683 1374 aa14.46□□□□□ -0.09
TNFAIP3-206ENST00000612899 H0YHG0 523 aa14.46□□□□□ -0.09
TNFAIP3-206ENST00000612899 RFC4P35249 363 aa14.46□□□□□ -0.09
TNFAIP3-206ENST00000612899 ATP6V1AP38606 617 aa14.46□□□□□ -0.09
TNFAIP3-206ENST00000612899 PDE4BQ07343 736 aa14.46□□□□□ -0.09
TNFAIP3-206ENST00000612899 WWC2Q6AWC2 1192 aa14.46□□□□□ -0.09
TNFAIP3-206ENST00000612899 HSPA2P54652 639 aa14.46□□□□□ -0.1
TNFAIP3-206ENST00000612899 SNX21Q969T3 373 aa14.46□□□□□ -0.1
TNFAIP3-206ENST00000612899 UBA5Q9GZZ9 404 aa14.46□□□□□ -0.1
TNFAIP3-206ENST00000612899 URI1O94763 535 aaPredicted RBP14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 BAG3O95817 575 aa14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 SMAP1Q8IYB5 467 aaPredicted RBP14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 C16orf45Q96MC5 204 aaPredicted RBP14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 RAB34Q9BZG1 259 aa14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 CALCOCO1Q9P1Z2 691 aa14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 TBX22Q9Y458 520 aa14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 CYP7A1P22680 504 aa14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 HELBQ8NG08 1087 aaPredicted RBP14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 KIF18AQ8NI77 898 aa14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 IP6K1Q92551 441 aa14.45□□□□□ -0.1
TNFAIP3-206ENST00000612899 ZSCAN16Q9H4T2 348 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms