RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 ZPR1O75312 459 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 HOXB7P09629 217 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 FSIP1Q8NA03 581 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 DCAF5Q96JK2 942 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 CEP131Q9UPN4 1083 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 PLXNC1O60486 1568 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 UQCRHLA0A096LP55 91 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 GOLGA8AA7E2F4 631 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 UQCRHP07919 91 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 ZFYP08048 801 aaPredicted RBP10.03□□□□□ -0.8
TMCO1-208ENST00000612311 IQCA1Q86XH1 822 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 CCAR1Q8IX12 1150 aaKnown RBP10.03□□□□□ -0.8
TMCO1-208ENST00000612311 ZGPATQ8N5A5 531 aaKnown RBP10.03□□□□□ -0.8
TMCO1-208ENST00000612311 TTC37Q6PGP7 1564 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 CFAP100Q494V2 611 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 MCMDC2Q4G0Z9 681 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 KAT6BQ8WYB5 2073 aa10.03□□□□□ -0.8
TMCO1-208ENST00000612311 KDM5AP29375 1690 aaKnown RBP10.02□□□□□ -0.8
TMCO1-208ENST00000612311 KDM5DQ9BY66 1539 aa10.02□□□□□ -0.8
TMCO1-208ENST00000612311 RANBP6O60518 1105 aaKnown RBP10.02□□□□□ -0.8
TMCO1-208ENST00000612311 PPFIA3O75145 1194 aa10.02□□□□□ -0.8
TMCO1-208ENST00000612311 NMIQ13287 307 aaPredicted RBP10.02□□□□□ -0.8
TMCO1-208ENST00000612311 ATP2B3Q16720 1220 aa10.02□□□□□ -0.8
TMCO1-208ENST00000612311 NCOA7Q8NI08 942 aa10.02□□□□□ -0.8
TMCO1-208ENST00000612311 CTCFLQ8NI51 663 aaPredicted RBP10.02□□□□□ -0.8
TMCO1-208ENST00000612311 HCLS1P14317 486 aaPredicted RBP10.02□□□□□ -0.81
TMCO1-208ENST00000612311 CDC5LQ99459 802 aaKnown RBP10.02□□□□□ -0.81
TMCO1-208ENST00000612311 LRRC2Q9BYS8 371 aa10.02□□□□□ -0.81
TMCO1-208ENST00000612311 ANO8Q9HCE9 1232 aaPredicted RBP10.02□□□□□ -0.81
TMCO1-208ENST00000612311 LTKP29376 864 aa10.02□□□□□ -0.81
TMCO1-208ENST00000612311 LRSAM1Q6UWE0 723 aa10.02□□□□□ -0.81
TMCO1-208ENST00000612311 ORAI2Q96SN7 254 aa10.02□□□□□ -0.81
TMCO1-208ENST00000612311 LGR6Q9HBX8 967 aa10.02□□□□□ -0.81
TMCO1-208ENST00000612311 ZNHIT6Q9NWK9 470 aaKnown RBP10.02□□□□□ -0.81
TMCO1-208ENST00000612311 UGGT1Q9NYU2 1555 aa10.02□□□□□ -0.81
TMCO1-208ENST00000612311 MYOM2P54296 1465 aa10.02□□□□□ -0.81
TMCO1-208ENST00000612311 KRT18P05783 430 aaKnown RBP10.01□□□□□ -0.81
TMCO1-208ENST00000612311 IARSP41252 1262 aaKnown RBP10.01□□□□□ -0.81
TMCO1-208ENST00000612311 USP5P45974 858 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 ACBD3Q9H3P7 528 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 UQCRFS1P1P0C7P4 283 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 MCM5P33992 734 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 ZNF165P49910 485 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 AK2P54819 239 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 HSP90B2PQ58FF3 399 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 MICU3Q86XE3 530 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 INTS4Q96HW7 963 aaKnown RBP10.01□□□□□ -0.81
TMCO1-208ENST00000612311 PANK2Q9BZ23 570 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 ZSCAN16Q9H4T2 348 aaPredicted RBP10.01□□□□□ -0.81
TMCO1-208ENST00000612311 SFPQP23246 707 aaKnown RBP eCLIP10.01□□□□□ -0.81
TMCO1-208ENST00000612311 TMEM67Q5HYA8 995 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 DZIP1Q86YF9 867 aaKnown RBP10.01□□□□□ -0.81
TMCO1-208ENST00000612311 MKNK2Q9HBH9 465 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 CNPY2Q9Y2B0 182 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 IL2RBP14784 551 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 GIMAP6Q6P9H5 292 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 USP48Q86UV5 1035 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 RAB11FIP4Q86YS3 637 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 FAM177A1Q8N128 213 aaPredicted RBP10.01□□□□□ -0.81
TMCO1-208ENST00000612311 PREX2Q70Z35 1606 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 KIAA0232Q92628 1395 aa10.01□□□□□ -0.81
TMCO1-208ENST00000612311 USP19O94966 1318 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 ZNF790Q6PG37 636 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 CAGE1Q8TC20 777 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 PLEKHF1Q96S99 279 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 BICC1Q9H694 974 aaKnown RBP10□□□□□ -0.81
TMCO1-208ENST00000612311 ZNF287Q9HBT7 754 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 ABCC4O15439 1325 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 PNMA6EA0A0J9YXQ4 647 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 KLF18A0A0U1RQI7 1052 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 F13A1P00488 732 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 SSRP1Q08945 709 aaKnown RBP10□□□□□ -0.81
TMCO1-208ENST00000612311 UVSSAQ2YD98 709 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 NGLY1Q96IV0 654 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 MLH3Q9UHC1 1453 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 ADCY5O95622 1261 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 POLR3DP05423 398 aaPredicted RBP10□□□□□ -0.81
TMCO1-208ENST00000612311 NBPF6Q5VWK0 638 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 CREB3L3Q68CJ9 461 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 KLHL34Q8N239 644 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 NBPF4Q96M43 638 aa10□□□□□ -0.81
TMCO1-208ENST00000612311 METAP2P50579 478 aaKnown RBP eCLIP9.99□□□□□ -0.812e-7■■■□□ 15.8
TMCO1-208ENST00000612311 ZSCAN29Q8IWY8 852 aaPredicted RBP9.99□□□□□ -0.81
TMCO1-208ENST00000612311 PAG1Q9NWQ8 432 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 ANKIB1Q9P2G1 1089 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 RBM5P52756 815 aaKnown RBP eCLIP9.99□□□□□ -0.81
TMCO1-208ENST00000612311 DNM1Q05193 864 aaKnown RBP9.99□□□□□ -0.81
TMCO1-208ENST00000612311 Q6ZUG5 572 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 CCDC144CPQ8IYA2 1237 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 ZHX3Q9H4I2 956 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 CAVIN2O95810 425 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 NBPF7P0C2Y1 421 aaPredicted RBP9.99□□□□□ -0.81
TMCO1-208ENST00000612311 TFCP2Q12800 502 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 MFSD6Q6ZSS7 791 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 RUFY1Q96T51 708 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 CLIP2Q9UDT6 1046 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 RAD50Q92878 1312 aa9.99□□□□□ -0.81
TMCO1-208ENST00000612311 SYNMO15061 1565 aa9.98□□□□□ -0.81
TMCO1-208ENST00000612311 SSBP05455 408 aaKnown RBP eCLIP9.98□□□□□ -0.81
TMCO1-208ENST00000612311 AEBP2Q6ZN18 517 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms