RNA–Protein interactions for RNA: ENST00000612060.1

SCN5A-214, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 5 BASIC

Gene SCN5A, Length 714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-214ENST00000612060 SYNE4Q8N205 404 aa22.69■■□□□ 1.22
SCN5A-214ENST00000612060 NLRP3Q96P20 1036 aa22.69■■□□□ 1.22
SCN5A-214ENST00000612060 PSMD1Q99460 953 aa22.69■■□□□ 1.22
SCN5A-214ENST00000612060 UTP14AQ9BVJ6 771 aaKnown RBP22.69■■□□□ 1.22
SCN5A-214ENST00000612060 JMYQ8N9B5 988 aa22.68■■□□□ 1.22
SCN5A-214ENST00000612060 L3MBTL3Q96JM7 780 aaPredicted RBP22.68■■□□□ 1.22
SCN5A-214ENST00000612060 SCN4AP35499 1836 aa22.68■■□□□ 1.22
SCN5A-214ENST00000612060 RNF123Q5XPI4 1314 aa22.67■■□□□ 1.22
SCN5A-214ENST00000612060 HOXA10P31260 410 aaPredicted RBP22.67■■□□□ 1.22
SCN5A-214ENST00000612060 OLFM4Q6UX06 510 aa22.67■■□□□ 1.22
SCN5A-214ENST00000612060 LDHDQ86WU2 507 aa22.67■■□□□ 1.22
SCN5A-214ENST00000612060 HACL1Q9UJ83 578 aa22.67■■□□□ 1.22
SCN5A-214ENST00000612060 PPEF1O14829 653 aaPredicted RBP22.66■■□□□ 1.22
SCN5A-214ENST00000612060 NTSR2O95665 410 aa22.66■■□□□ 1.22
SCN5A-214ENST00000612060 EIF6P56537 245 aaKnown RBP22.66■■□□□ 1.22
SCN5A-214ENST00000612060 AIMP1Q12904 312 aaKnown RBP22.66■■□□□ 1.22
SCN5A-214ENST00000612060 NECTIN2Q92692 538 aa22.66■■□□□ 1.22
SCN5A-214ENST00000612060 CRAMP1Q96RY5 1269 aa22.66■■□□□ 1.22
SCN5A-214ENST00000612060 EAPPQ56P03 285 aaPredicted RBP22.65■■□□□ 1.22
SCN5A-214ENST00000612060 CLEC11AQ9Y240 323 aa22.65■■□□□ 1.22
SCN5A-214ENST00000612060 ZNF541Q9H0D2 1346 aa22.64■■□□□ 1.22
SCN5A-214ENST00000612060 PNMA8AQ86V59 439 aaPredicted RBP22.64■■□□□ 1.21
SCN5A-214ENST00000612060 GPC2Q8N158 579 aa22.64■■□□□ 1.21
SCN5A-214ENST00000612060 TAF1DQ9H5J8 278 aaPredicted RBP22.64■■□□□ 1.21
SCN5A-214ENST00000612060 ANXA1P04083 346 aa22.63■■□□□ 1.21
SCN5A-214ENST00000612060 LMOD1P29536 600 aaPredicted RBP22.63■■□□□ 1.21
SCN5A-214ENST00000612060 PDIA6Q15084 440 aa22.63■■□□□ 1.21
SCN5A-214ENST00000612060 COPS6Q7L5N1 327 aa22.63■■□□□ 1.21
SCN5A-214ENST00000612060 LARGE2Q8N3Y3 721 aa22.63■■□□□ 1.21
SCN5A-214ENST00000612060 XAGE3Q8WTP9 111 aa22.63■■□□□ 1.21
SCN5A-214ENST00000612060 DDX21Q9NR30 783 aaKnown RBP eCLIP22.63■■□□□ 1.21
SCN5A-214ENST00000612060 CREBZFQ9NS37 354 aa22.63■■□□□ 1.21
SCN5A-214ENST00000612060 FZD9O00144 591 aa22.62■■□□□ 1.21
SCN5A-214ENST00000612060 CHL1O00533 1208 aa22.62■■□□□ 1.21
SCN5A-214ENST00000612060 TCERG1O14776 1098 aaKnown RBP22.62■■□□□ 1.21
SCN5A-214ENST00000612060 PROSER3Q2NL68 480 aa22.62■■□□□ 1.21
SCN5A-214ENST00000612060 HDGFL1Q5TGJ6 251 aa22.62■■□□□ 1.21
SCN5A-214ENST00000612060 HOXB7P09629 217 aa22.61■■□□□ 1.21
SCN5A-214ENST00000612060 EPHX2P34913 555 aa22.61■■□□□ 1.21
SCN5A-214ENST00000612060 TRMT112Q9UI30 125 aaKnown RBP22.61■■□□□ 1.21
SCN5A-214ENST00000612060 ANKRD36CQ5JPF3 1778 aa22.61■■□□□ 1.21
SCN5A-214ENST00000612060 CALD1Q05682 793 aaKnown RBP22.6■■□□□ 1.21
SCN5A-214ENST00000612060 NIM1KQ8IY84 436 aa22.6■■□□□ 1.21
SCN5A-214ENST00000612060 SUPT20HQ8NEM7 779 aa22.6■■□□□ 1.21
SCN5A-214ENST00000612060 ADAMTS8Q9UP79 889 aa22.6■■□□□ 1.21
SCN5A-214ENST00000612060 GJA3Q9Y6H8 435 aa22.6■■□□□ 1.21
SCN5A-214ENST00000612060 POTEIP0CG38 1075 aa22.59■■□□□ 1.21
SCN5A-214ENST00000612060 POTEJP0CG39 1038 aa22.59■■□□□ 1.21
SCN5A-214ENST00000612060 SLC10A5Q5PT55 438 aa22.59■■□□□ 1.21
SCN5A-214ENST00000612060 DDX46Q7L014 1031 aaKnown RBP22.59■■□□□ 1.21
SCN5A-214ENST00000612060 LRP10Q7Z4F1 713 aa22.59■■□□□ 1.21
SCN5A-214ENST00000612060 SH3TC1Q8TE82 1336 aa22.58■■□□□ 1.21
SCN5A-214ENST00000612060 TCIRG1Q13488 830 aa22.58■■□□□ 1.21
SCN5A-214ENST00000612060 CHPF2Q9P2E5 772 aa22.58■■□□□ 1.21
SCN5A-214ENST00000612060 DBF4Q9UBU7 674 aaPredicted RBP22.58■■□□□ 1.21
SCN5A-214ENST00000612060 PPIP5K2O43314 1243 aa22.57■■□□□ 1.2
SCN5A-214ENST00000612060 BBOX1O75936 387 aa22.57■■□□□ 1.2
SCN5A-214ENST00000612060 NLRP10Q86W26 655 aa22.57■■□□□ 1.2
SCN5A-214ENST00000612060 CFAP44Q96MT7 982 aa22.57■■□□□ 1.2
SCN5A-214ENST00000612060 VPS33BQ9H267 617 aa22.57■■□□□ 1.2
SCN5A-214ENST00000612060 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
SCN5A-214ENST00000612060 TRIM35Q9UPQ4 493 aa22.57■■□□□ 1.2
SCN5A-214ENST00000612060 ATP6V0A2Q9Y487 856 aa22.57■■□□□ 1.2
SCN5A-214ENST00000612060 HYPKQ9NX55 129 aa22.56■■□□□ 1.2
SCN5A-214ENST00000612060 ABCC4O15439 1325 aa22.56■■□□□ 1.2
SCN5A-214ENST00000612060 DPP8Q6V1X1 898 aaPredicted RBP22.55■■□□□ 1.2
SCN5A-214ENST00000612060 C3orf67Q6ZVT6 689 aa22.55■■□□□ 1.2
SCN5A-214ENST00000612060 PLBD2Q8NHP8 589 aa22.55■■□□□ 1.2
SCN5A-214ENST00000612060 CHMP4AQ9BY43 222 aa22.55■■□□□ 1.2
SCN5A-214ENST00000612060 MKRN1Q9UHC7 482 aaKnown RBP22.55■■□□□ 1.2
SCN5A-214ENST00000612060 SNED1Q8TER0 1413 aa22.55■■□□□ 1.2
SCN5A-214ENST00000612060 TMEM88BA6NKF7 163 aa22.54■■□□□ 1.2
SCN5A-214ENST00000612060 HCLS1P14317 486 aaPredicted RBP22.54■■□□□ 1.2
SCN5A-214ENST00000612060 KRT24Q2M2I5 525 aa22.54■■□□□ 1.2
SCN5A-214ENST00000612060 ANKRD13DQ6ZTN6 518 aa22.54■■□□□ 1.2
SCN5A-214ENST00000612060 TMC4Q7Z404 712 aa22.54■■□□□ 1.2
SCN5A-214ENST00000612060 HSPA1AP0DMV8 641 aaKnown RBP22.53■■□□□ 1.2
SCN5A-214ENST00000612060 HSPA1BP0DMV9 641 aaKnown RBP22.53■■□□□ 1.2
SCN5A-214ENST00000612060 PASKQ96RG2 1323 aa22.53■■□□□ 1.2
SCN5A-214ENST00000612060 GNAI1P63096 354 aa22.52■■□□□ 1.2
SCN5A-214ENST00000612060 DUSP27Q5VZP5 1158 aa22.52■■□□□ 1.2
SCN5A-214ENST00000612060 SP8Q8IXZ3 490 aa22.52■■□□□ 1.2
SCN5A-214ENST00000612060 MPNDQ8N594 471 aa22.52■■□□□ 1.2
SCN5A-214ENST00000612060 HSP90B1P14625 803 aaKnown RBP22.51■■□□□ 1.19
SCN5A-214ENST00000612060 GOLGA2Q08379 1002 aa22.51■■□□□ 1.19
SCN5A-214ENST00000612060 GRAPQ13588 217 aa22.51■■□□□ 1.19
SCN5A-214ENST00000612060 AOC3Q16853 763 aa22.51■■□□□ 1.19
SCN5A-214ENST00000612060 CNTROBQ8N137 903 aa22.51■■□□□ 1.19
SCN5A-214ENST00000612060 GRAPLQ8TC17 118 aaPredicted RBP22.51■■□□□ 1.19
SCN5A-214ENST00000612060 MBIPQ9NS73 344 aa22.5■■□□□ 1.19
SCN5A-214ENST00000612060 IFT57Q9NWB7 429 aa22.5■■□□□ 1.19
SCN5A-214ENST00000612060 LAMB2P55268 1798 aa22.49■■□□□ 1.19
SCN5A-214ENST00000612060 APAF1O14727 1248 aa22.49■■□□□ 1.19
SCN5A-214ENST00000612060 MAP1SQ66K74 1059 aaPredicted RBP22.49■■□□□ 1.19
SCN5A-214ENST00000612060 RIC3Q7Z5B4 369 aa22.49■■□□□ 1.19
SCN5A-214ENST00000612060 ZNRF3Q9ULT6 936 aa22.49■■□□□ 1.19
SCN5A-214ENST00000612060 CNTNAP1P78357 1384 aa22.49■■□□□ 1.19
SCN5A-214ENST00000612060 ITGBL1O95965 494 aaPredicted RBP22.48■■□□□ 1.19
SCN5A-214ENST00000612060 USP50Q70EL3 339 aaPredicted RBP22.48■■□□□ 1.19
SCN5A-214ENST00000612060 TNS4Q8IZW8 715 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms