RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 PA2G4Q9UQ80 394 aaKnown RBP14.11□□□□□ -0.15
TPM3-223ENST00000611659 PI4KAP2A4QPH2 592 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 SYCP1Q15431 976 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 PTPN14Q15678 1187 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.1□□□□□ -0.15
TPM3-223ENST00000611659 PI4KAP1Q8N8J0 262 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 IL17REQ8NFR9 667 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 FBXW7Q969H0 707 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 GPATCH3Q96I76 525 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 GABPB1Q06547 395 aaPredicted RBP14.1□□□□□ -0.15
TPM3-223ENST00000611659 NRKQ7Z2Y5 1582 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 TTC41PQ6P2S7 1318 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 TTC21AQ8NDW8 1320 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 A2ML1A8K2U0 1454 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 FOSBP53539 338 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 AACSQ86V21 672 aa14.1□□□□□ -0.15
TPM3-223ENST00000611659 BBXQ8WY36 941 aaPredicted RBP14.1□□□□□ -0.15
TPM3-223ENST00000611659 MAP3K5Q99683 1374 aa14.09□□□□□ -0.15
TPM3-223ENST00000611659 A0A087WWV3 80 aa14.09□□□□□ -0.15
TPM3-223ENST00000611659 SKILP12757 684 aa14.09□□□□□ -0.15
TPM3-223ENST00000611659 PSMA5P28066 241 aa14.09□□□□□ -0.15
TPM3-223ENST00000611659 LRRC8AQ8IWT6 810 aa14.09□□□□□ -0.15
TPM3-223ENST00000611659 PGBD1Q96JS3 809 aa14.09□□□□□ -0.15
TPM3-223ENST00000611659 SLC27A2O14975 620 aa14.09□□□□□ -0.15
TPM3-223ENST00000611659 NMIQ13287 307 aaPredicted RBP14.09□□□□□ -0.15
TPM3-223ENST00000611659 USP16Q9Y5T5 823 aa14.09□□□□□ -0.15
TPM3-223ENST00000611659 ERICH4A6NGS2 130 aa14.08□□□□□ -0.15
TPM3-223ENST00000611659 BECN2A8MW95 431 aa14.08□□□□□ -0.15
TPM3-223ENST00000611659 ZBTB22O15209 634 aa14.08□□□□□ -0.15
TPM3-223ENST00000611659 SLFN14P0C7P3 912 aa14.08□□□□□ -0.15
TPM3-223ENST00000611659 CEBPAP49715 358 aaPredicted RBP14.08□□□□□ -0.15
TPM3-223ENST00000611659 KMT5BQ4FZB7 885 aa14.08□□□□□ -0.15
TPM3-223ENST00000611659 KRT222Q8N1A0 295 aa14.08□□□□□ -0.15
TPM3-223ENST00000611659 CHPF2Q9P2E5 772 aa14.08□□□□□ -0.15
TPM3-223ENST00000611659 TAF6LQ9Y6J9 622 aa14.08□□□□□ -0.15
TPM3-223ENST00000611659 OVOS2A0A0J9YW53 1432 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 H3BQV1 296 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 ELF2Q15723 593 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 IFFO2Q5TF58 517 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 OVOS2Q6IE36 1432 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 DNAAF4Q8WXU2 420 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 EVI5LQ96CN4 794 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 MORC2Q9Y6X9 1032 aaPredicted RBP14.08□□□□□ -0.16
TPM3-223ENST00000611659 C3P01024 1663 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 JAK2O60674 1132 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 RIMBP3CA6NJZ7 1639 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 RIMBP3BA6NNM3 1639 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 RIMBP3Q9UFD9 1639 aa14.08□□□□□ -0.16
TPM3-223ENST00000611659 MON2Q7Z3U7 1717 aa14.07□□□□□ -0.16
TPM3-223ENST00000611659 TAF3Q5VWG9 929 aa14.07□□□□□ -0.16
TPM3-223ENST00000611659 C11orf57Q6ZUT1 292 aaPredicted RBP14.07□□□□□ -0.16
TPM3-223ENST00000611659 ZNF397Q8NF99 534 aaPredicted RBP14.07□□□□□ -0.16
TPM3-223ENST00000611659 C9orf78Q9NZ63 289 aaPredicted RBP14.07□□□□□ -0.16
TPM3-223ENST00000611659 CCDC8Q9H0W5 538 aaPredicted RBP14.07□□□□□ -0.16
TPM3-223ENST00000611659 FLT4P35916 1363 aa14.07□□□□□ -0.16
TPM3-223ENST00000611659 PEAK1Q9H792 1746 aa14.07□□□□□ -0.16
TPM3-223ENST00000611659 HSP90B1P14625 803 aaKnown RBP14.06□□□□□ -0.16
TPM3-223ENST00000611659 ANKRD1Q15327 319 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 BEND3Q5T5X7 828 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 RNF20Q5VTR2 975 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 FSD1Q9BTV5 496 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 CCDC69A6NI79 296 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 TERF2Q15554 542 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 MAP4K1Q92918 833 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 BOLA2Q9H3K6 86 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 XRN1Q8IZH2 1706 aaKnown RBP14.06□□□□□ -0.16
TPM3-223ENST00000611659 FBXO38Q6PIJ6 1188 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 BRF1Q92994 677 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 SYTL4Q96C24 671 aaPredicted RBP14.06□□□□□ -0.16
TPM3-223ENST00000611659 ST7Q9NRC1 585 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 IGSF1Q8N6C5 1336 aa14.06□□□□□ -0.16
TPM3-223ENST00000611659 CEP170BQ9Y4F5 1589 aaPredicted RBP14.05□□□□□ -0.16
TPM3-223ENST00000611659 A0A0D9SFI3 127 aa14.05□□□□□ -0.16
TPM3-223ENST00000611659 HTATSF1O43719 755 aaKnown RBP14.05□□□□□ -0.16
TPM3-223ENST00000611659 RPS6KB1P23443 525 aa14.05□□□□□ -0.16
TPM3-223ENST00000611659 RBM43Q6ZSC3 357 aaKnown RBP14.05□□□□□ -0.16
TPM3-223ENST00000611659 NGDNQ8NEJ9 315 aaKnown RBP14.05□□□□□ -0.16
TPM3-223ENST00000611659 ERCC4Q92889 916 aaPredicted RBP14.05□□□□□ -0.16
TPM3-223ENST00000611659 PDIA4P13667 645 aaKnown RBP14.05□□□□□ -0.16
TPM3-223ENST00000611659 TOB2Q14106 344 aaPredicted RBP14.05□□□□□ -0.16
TPM3-223ENST00000611659 KCNB2Q92953 911 aa14.05□□□□□ -0.16
TPM3-223ENST00000611659 USP6P35125 1406 aa14.05□□□□□ -0.16
TPM3-223ENST00000611659 ITSN1Q15811 1721 aa14.04□□□□□ -0.16
TPM3-223ENST00000611659 SBNO1A3KN83 1393 aa14.04□□□□□ -0.16
TPM3-223ENST00000611659 FGD1P98174 961 aa14.04□□□□□ -0.16
TPM3-223ENST00000611659 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
TPM3-223ENST00000611659 KDRP35968 1356 aa14.04□□□□□ -0.16
TPM3-223ENST00000611659 ROBO2Q9HCK4 1378 aa14.04□□□□□ -0.16
TPM3-223ENST00000611659 USP42Q9H9J4 1324 aaKnown RBP14.04□□□□□ -0.16
TPM3-223ENST00000611659 FTOQ9C0B1 505 aaKnown RBP eCLIP14.04□□□□□ -0.167e-6■■□□□ 12.9
TPM3-223ENST00000611659 SIL1Q9H173 461 aa14.04□□□□□ -0.16
TPM3-223ENST00000611659 PPFIA3O75145 1194 aa14.04□□□□□ -0.16
TPM3-223ENST00000611659 IQCB1Q15051 598 aa14.04□□□□□ -0.16
TPM3-223ENST00000611659 CDC25BP30305 580 aa14.03□□□□□ -0.16
TPM3-223ENST00000611659 NLRP6P59044 892 aa14.03□□□□□ -0.16
TPM3-223ENST00000611659 TSPOAP1O95153 1857 aa14.03□□□□□ -0.16
TPM3-223ENST00000611659 PLEKHG3A1L390 1219 aa14.03□□□□□ -0.16
TPM3-223ENST00000611659 CDK11BP21127 795 aaKnown RBP14.03□□□□□ -0.16
TPM3-223ENST00000611659 STX1AQ16623 288 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms