RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 H7C1W4 665 aa22.42■■□□□ 1.18
SNAPC3-207ENST00000610884 FOXO4P98177 505 aa22.42■■□□□ 1.18
SNAPC3-207ENST00000610884 DAXXQ9UER7 740 aaPredicted RBP22.42■■□□□ 1.18
SNAPC3-207ENST00000610884 SALL3Q9BXA9 1300 aa22.41■■□□□ 1.18
SNAPC3-207ENST00000610884 MAP3K15Q6ZN16 1313 aa22.41■■□□□ 1.18
SNAPC3-207ENST00000610884 LINC00116Q8NCU8 138 aa22.4■■□□□ 1.18
SNAPC3-207ENST00000610884 KIF1BPQ96EK5 621 aa22.4■■□□□ 1.18
SNAPC3-207ENST00000610884 G3BP1Q13283 466 aaKnown RBP eCLIP22.39■■□□□ 1.18
SNAPC3-207ENST00000610884 C22orf23Q9BZE7 217 aa22.39■■□□□ 1.18
SNAPC3-207ENST00000610884 CCDC87Q9NVE4 849 aa22.39■■□□□ 1.18
SNAPC3-207ENST00000610884 NDUFB9Q9Y6M9 179 aa22.39■■□□□ 1.18
SNAPC3-207ENST00000610884 PTPN12Q05209 780 aaKnown RBP22.39■■□□□ 1.17
SNAPC3-207ENST00000610884 GIGYF2Q6Y7W6 1299 aaKnown RBP22.39■■□□□ 1.17
SNAPC3-207ENST00000610884 AACSQ86V21 672 aa22.39■■□□□ 1.17
SNAPC3-207ENST00000610884 AMIGO3Q86WK7 504 aa22.39■■□□□ 1.17
SNAPC3-207ENST00000610884 EAF2Q96CJ1 260 aaPredicted RBP22.39■■□□□ 1.17
SNAPC3-207ENST00000610884 ISCA1Q9BUE6 129 aa22.39■■□□□ 1.17
SNAPC3-207ENST00000610884 CCDC191Q8NCU4 936 aa22.38■■□□□ 1.17
SNAPC3-207ENST00000610884 RFX5P48382 616 aaPredicted RBP22.38■■□□□ 1.17
SNAPC3-207ENST00000610884 NFKBIBQ15653 356 aa22.38■■□□□ 1.17
SNAPC3-207ENST00000610884 TBC1D32Q96NH3 1257 aa22.38■■□□□ 1.17
SNAPC3-207ENST00000610884 UPF2Q9HAU5 1272 aaKnown RBP22.38■■□□□ 1.17
SNAPC3-207ENST00000610884 MYH14Q7Z406 1995 aaKnown RBP22.38■■□□□ 1.17
SNAPC3-207ENST00000610884 PUS3Q9BZE2 481 aaKnown RBP22.37■■□□□ 1.17
SNAPC3-207ENST00000610884 RAB11FIP3O75154 756 aa22.37■■□□□ 1.17
SNAPC3-207ENST00000610884 TRPC5Q9UL62 973 aaPredicted RBP22.37■■□□□ 1.17
SNAPC3-207ENST00000610884 CDC45O75419 566 aa22.36■■□□□ 1.17
SNAPC3-207ENST00000610884 EIF5P55010 431 aaKnown RBP22.36■■□□□ 1.17
SNAPC3-207ENST00000610884 TFCP2Q12800 502 aa22.36■■□□□ 1.17
SNAPC3-207ENST00000610884 SPRYD3Q8NCJ5 442 aa22.36■■□□□ 1.17
SNAPC3-207ENST00000610884 RTN4Q9NQC3 1192 aaKnown RBP22.36■■□□□ 1.17
SNAPC3-207ENST00000610884 UBN2Q6ZU65 1347 aa22.36■■□□□ 1.17
SNAPC3-207ENST00000610884 LRRC24Q50LG9 513 aa22.36■■□□□ 1.17
SNAPC3-207ENST00000610884 BICDL1Q6ZP65 573 aa22.36■■□□□ 1.17
SNAPC3-207ENST00000610884 NLRP10Q86W26 655 aa22.36■■□□□ 1.17
SNAPC3-207ENST00000610884 CLASRPQ8N2M8 674 aaKnown RBP22.35■■□□□ 1.17
SNAPC3-207ENST00000610884 NUP188Q5SRE5 1749 aa22.35■■□□□ 1.17
SNAPC3-207ENST00000610884 IL6STP40189 918 aaPredicted RBP22.35■■□□□ 1.17
SNAPC3-207ENST00000610884 IL25Q9H293 177 aa22.35■■□□□ 1.17
SNAPC3-207ENST00000610884 TRMT112Q9UI30 125 aaKnown RBP22.35■■□□□ 1.17
SNAPC3-207ENST00000610884 TJP1Q07157 1748 aa22.35■■□□□ 1.17
SNAPC3-207ENST00000610884 IFIT2P09913 472 aaKnown RBP22.34■■□□□ 1.17
SNAPC3-207ENST00000610884 RABL6Q3YEC7 729 aaPredicted RBP22.34■■□□□ 1.17
SNAPC3-207ENST00000610884 PI4K2BQ8TCG2 481 aa22.34■■□□□ 1.17
SNAPC3-207ENST00000610884 HCLS1P14317 486 aaPredicted RBP22.33■■□□□ 1.17
SNAPC3-207ENST00000610884 OSBPL3Q9H4L5 887 aa22.33■■□□□ 1.17
SNAPC3-207ENST00000610884 CCDC24Q8N4L8 307 aa22.33■■□□□ 1.16
SNAPC3-207ENST00000610884 EDC3Q96F86 508 aaKnown RBP22.32■■□□□ 1.16
SNAPC3-207ENST00000610884 HDAC5Q9UQL6 1122 aa22.32■■□□□ 1.16
SNAPC3-207ENST00000610884 SUSD4Q5VX71 490 aa22.32■■□□□ 1.16
SNAPC3-207ENST00000610884 TIMM10P62072 90 aa22.31■■□□□ 1.16
SNAPC3-207ENST00000610884 PHF14O94880 888 aa22.31■■□□□ 1.16
SNAPC3-207ENST00000610884 HSP90AB4PQ58FF6 505 aa22.31■■□□□ 1.16
SNAPC3-207ENST00000610884 SRP68Q9UHB9 627 aaKnown RBP22.31■■□□□ 1.16
SNAPC3-207ENST00000610884 TRIM37O94972 964 aa22.3■■□□□ 1.16
SNAPC3-207ENST00000610884 GSE1Q14687 1217 aa22.3■■□□□ 1.16
SNAPC3-207ENST00000610884 ZBTB38Q8NAP3 1195 aaPredicted RBP22.3■■□□□ 1.16
SNAPC3-207ENST00000610884 BOLA2Q9H3K6 86 aa22.3■■□□□ 1.16
SNAPC3-207ENST00000610884 STAP2Q9UGK3 403 aa22.3■■□□□ 1.16
SNAPC3-207ENST00000610884 CCNL1Q9UK58 526 aaPredicted RBP22.3■■□□□ 1.16
SNAPC3-207ENST00000610884 SMARCC1Q92922 1105 aaPredicted RBP22.3■■□□□ 1.16
SNAPC3-207ENST00000610884 CAMTA2O94983 1202 aa22.29■■□□□ 1.16
SNAPC3-207ENST00000610884 CHGBP05060 677 aa22.29■■□□□ 1.16
SNAPC3-207ENST00000610884 GREM2Q9H772 168 aa22.29■■□□□ 1.16
SNAPC3-207ENST00000610884 COPRSQ9NQ92 184 aa22.29■■□□□ 1.16
SNAPC3-207ENST00000610884 IRS4O14654 1257 aaPredicted RBP22.29■■□□□ 1.16
SNAPC3-207ENST00000610884 NEUROD6Q96NK8 337 aa22.29■■□□□ 1.16
SNAPC3-207ENST00000610884 ATG9AQ7Z3C6 839 aa22.28■■□□□ 1.16
SNAPC3-207ENST00000610884 NIP7Q9Y221 180 aaKnown RBP eCLIP22.28■■□□□ 1.16
SNAPC3-207ENST00000610884 GNPATO15228 680 aa22.28■■□□□ 1.16
SNAPC3-207ENST00000610884 LRRC4BQ9NT99 713 aa22.28■■□□□ 1.16
SNAPC3-207ENST00000610884 PCCAP05165 728 aaPredicted RBP22.27■■□□□ 1.16
SNAPC3-207ENST00000610884 DBNDD2Q9BQY9 259 aa22.27■■□□□ 1.16
SNAPC3-207ENST00000610884 DBNLQ9UJU6 430 aaKnown RBP22.26■■□□□ 1.15
SNAPC3-207ENST00000610884 ATRNO75882 1429 aa22.26■■□□□ 1.15
SNAPC3-207ENST00000610884 ONECUT3O60422 494 aaPredicted RBP22.26■■□□□ 1.15
SNAPC3-207ENST00000610884 CCDC57Q2TAC2 916 aa22.26■■□□□ 1.15
SNAPC3-207ENST00000610884 ZNF34Q8IZ26 560 aa22.26■■□□□ 1.15
SNAPC3-207ENST00000610884 ECHDC1Q9NTX5 307 aa22.25■■□□□ 1.15
SNAPC3-207ENST00000610884 NUP98P52948 1817 aa22.25■■□□□ 1.15
SNAPC3-207ENST00000610884 COL15A1P39059 1388 aa22.25■■□□□ 1.15
SNAPC3-207ENST00000610884 CHMLP26374 656 aa22.25■■□□□ 1.15
SNAPC3-207ENST00000610884 TRIM28Q13263 835 aaKnown RBP22.25■■□□□ 1.15
SNAPC3-207ENST00000610884 ERC1Q8IUD2 1116 aa22.25■■□□□ 1.15
SNAPC3-207ENST00000610884 TTLL11Q8NHH1 800 aa22.25■■□□□ 1.15
SNAPC3-207ENST00000610884 KIF2CQ99661 725 aa22.25■■□□□ 1.15
SNAPC3-207ENST00000610884 SNAP23O00161 211 aa22.24■■□□□ 1.15
SNAPC3-207ENST00000610884 TNNI3KQ59H18 835 aa22.24■■□□□ 1.15
SNAPC3-207ENST00000610884 USPL1Q5W0Q7 1092 aa22.24■■□□□ 1.15
SNAPC3-207ENST00000610884 FPGT-TNNI3KV9GXZ4 949 aa22.24■■□□□ 1.15
SNAPC3-207ENST00000610884 CWC27Q6UX04 472 aaKnown RBP22.24■■□□□ 1.15
SNAPC3-207ENST00000610884 ITGA6P23229 1130 aa22.23■■□□□ 1.15
SNAPC3-207ENST00000610884 THSD7AQ9UPZ6 1657 aa22.23■■□□□ 1.15
SNAPC3-207ENST00000610884 ERVV-1B6SEH8 477 aa22.23■■□□□ 1.15
SNAPC3-207ENST00000610884 CD2BP2O95400 341 aaKnown RBP22.23■■□□□ 1.15
SNAPC3-207ENST00000610884 SLFNL1Q499Z3 407 aa22.23■■□□□ 1.15
SNAPC3-207ENST00000610884 TAF7LQ5H9L4 462 aa22.23■■□□□ 1.15
SNAPC3-207ENST00000610884 HELBQ8NG08 1087 aaPredicted RBP22.23■■□□□ 1.15
SNAPC3-207ENST00000610884 TBC1D2Q9BYX2 928 aa22.23■■□□□ 1.15
SNAPC3-207ENST00000610884 BTAF1O14981 1849 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms