RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 C7orf43Q8WVR3 580 aa18.51■□□□□ 0.55
PRDM16-210ENST00000607632 ZNF622Q969S3 477 aaKnown RBP eCLIP18.51■□□□□ 0.55
PRDM16-210ENST00000607632 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
PRDM16-210ENST00000607632 TWISTNBQ3B726 338 aaPredicted RBP18.5■□□□□ 0.55
PRDM16-210ENST00000607632 PHAXQ9H814 394 aaKnown RBP18.5■□□□□ 0.55
PRDM16-210ENST00000607632 LAMB2P55268 1798 aa18.5■□□□□ 0.55
PRDM16-210ENST00000607632 NFKBIEO00221 500 aa18.49■□□□□ 0.55
PRDM16-210ENST00000607632 GTF2E1P29083 439 aaPredicted RBP18.49■□□□□ 0.55
PRDM16-210ENST00000607632 HOXA10P31260 410 aaPredicted RBP18.49■□□□□ 0.55
PRDM16-210ENST00000607632 PRPF40BQ6NWY9 871 aaKnown RBP18.49■□□□□ 0.55
PRDM16-210ENST00000607632 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
PRDM16-210ENST00000607632 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
PRDM16-210ENST00000607632 SNED1Q8TER0 1413 aa18.49■□□□□ 0.55
PRDM16-210ENST00000607632 LTBP3Q9NS15 1303 aa18.49■□□□□ 0.55
PRDM16-210ENST00000607632 DDX60Q8IY21 1712 aaKnown RBP18.48■□□□□ 0.55
PRDM16-210ENST00000607632 DICER1Q9UPY3 1922 aaKnown RBP18.47■□□□□ 0.55
PRDM16-210ENST00000607632 VAMP4O75379 141 aa18.47■□□□□ 0.55
PRDM16-210ENST00000607632 PRELPP51888 382 aa18.47■□□□□ 0.55
PRDM16-210ENST00000607632 CCDC88AQ3V6T2 1871 aa18.46■□□□□ 0.55
PRDM16-210ENST00000607632 C21orf2O43822 256 aa18.46■□□□□ 0.55
PRDM16-210ENST00000607632 ALDH1B1P30837 517 aa18.46■□□□□ 0.55
PRDM16-210ENST00000607632 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
PRDM16-210ENST00000607632 SOGA3Q5TF21 947 aa18.46■□□□□ 0.55
PRDM16-210ENST00000607632 C9orf131Q5VYM1 1079 aa18.46■□□□□ 0.55
PRDM16-210ENST00000607632 MYH16Q9H6N6 1097 aa18.46■□□□□ 0.55
PRDM16-210ENST00000607632 ZC3H4Q9UPT8 1303 aaKnown RBP18.46■□□□□ 0.55
PRDM16-210ENST00000607632 RASSF7Q02833 373 aa18.45■□□□□ 0.54
PRDM16-210ENST00000607632 EXOSC9Q06265 439 aaKnown RBP18.45■□□□□ 0.54
PRDM16-210ENST00000607632 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
PRDM16-210ENST00000607632 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
PRDM16-210ENST00000607632 TIAM2Q8IVF5 1701 aa18.44■□□□□ 0.54
PRDM16-210ENST00000607632 LMNB1P20700 586 aa18.44■□□□□ 0.54
PRDM16-210ENST00000607632 RIC3Q7Z5B4 369 aa18.44■□□□□ 0.54
PRDM16-210ENST00000607632 CRAMP1Q96RY5 1269 aa18.44■□□□□ 0.54
PRDM16-210ENST00000607632 STK31Q9BXU1 1019 aa18.44■□□□□ 0.54
PRDM16-210ENST00000607632 DDX58O95786 925 aaKnown RBP18.43■□□□□ 0.54
PRDM16-210ENST00000607632 C1QTNF8P60827 252 aa18.43■□□□□ 0.54
PRDM16-210ENST00000607632 NLRP3Q96P20 1036 aa18.43■□□□□ 0.54
PRDM16-210ENST00000607632 METTL22Q9BUU2 404 aaPredicted RBP18.43■□□□□ 0.54
PRDM16-210ENST00000607632 TRMT112Q9UI30 125 aaKnown RBP18.43■□□□□ 0.54
PRDM16-210ENST00000607632 ATP5J2-PTCD1G3V325 749 aa18.42■□□□□ 0.54
PRDM16-210ENST00000607632 KSR2Q6VAB6 950 aa18.42■□□□□ 0.54
PRDM16-210ENST00000607632 SYNE4Q8N205 404 aa18.42■□□□□ 0.54
PRDM16-210ENST00000607632 RNF181Q9P0P0 153 aa18.42■□□□□ 0.54
PRDM16-210ENST00000607632 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
PRDM16-210ENST00000607632 CCDC93Q567U6 631 aa18.41■□□□□ 0.54
PRDM16-210ENST00000607632 DIEXFQ68CQ4 756 aaKnown RBP18.41■□□□□ 0.54
PRDM16-210ENST00000607632 G2E3Q7L622 706 aa18.41■□□□□ 0.54
PRDM16-210ENST00000607632 CCDC191Q8NCU4 936 aa18.41■□□□□ 0.54
PRDM16-210ENST00000607632 CC2D2BQ6DHV5 1058 aa18.4■□□□□ 0.54
PRDM16-210ENST00000607632 RPGRQ92834 1020 aaKnown RBP18.4■□□□□ 0.54
PRDM16-210ENST00000607632 RBM17Q96I25 401 aaKnown RBP18.4■□□□□ 0.54
PRDM16-210ENST00000607632 TAOK3Q9H2K8 898 aa18.4■□□□□ 0.54
PRDM16-210ENST00000607632 PI4KAP2A4QPH2 592 aa18.39■□□□□ 0.53
PRDM16-210ENST00000607632 E9PSI1 815 aa18.39■□□□□ 0.53
PRDM16-210ENST00000607632 TCERG1O14776 1098 aaKnown RBP18.39■□□□□ 0.53
PRDM16-210ENST00000607632 HCLS1P14317 486 aaPredicted RBP18.39■□□□□ 0.53
PRDM16-210ENST00000607632 FLIIQ13045 1269 aa18.39■□□□□ 0.53
PRDM16-210ENST00000607632 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.53
PRDM16-210ENST00000607632 PI4KAP1Q8N8J0 262 aa18.39■□□□□ 0.53
PRDM16-210ENST00000607632 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
PRDM16-210ENST00000607632 MYD88Q99836 296 aa18.39■□□□□ 0.53
PRDM16-210ENST00000607632 GPBP1L1Q9HC44 474 aaPredicted RBP18.39■□□□□ 0.53
PRDM16-210ENST00000607632 ZNF219Q9P2Y4 722 aaPredicted RBP18.39■□□□□ 0.53
PRDM16-210ENST00000607632 MAP3K2Q9Y2U5 619 aa18.39■□□□□ 0.53
PRDM16-210ENST00000607632 LRRC37AA6NMS7 1700 aa18.38■□□□□ 0.53
PRDM16-210ENST00000607632 IGKV5-2P06315 115 aa18.38■□□□□ 0.53
PRDM16-210ENST00000607632 FKBP4Q02790 459 aaKnown RBP eCLIP18.38■□□□□ 0.53
PRDM16-210ENST00000607632 SLFN5Q08AF3 891 aa18.38■□□□□ 0.53
PRDM16-210ENST00000607632 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
PRDM16-210ENST00000607632 RTKN2Q8IZC4 609 aa18.38■□□□□ 0.53
PRDM16-210ENST00000607632 FAM89AQ96GI7 184 aa18.38■□□□□ 0.53
PRDM16-210ENST00000607632 ABCC4O15439 1325 aa18.38■□□□□ 0.53
PRDM16-210ENST00000607632 PCCAP05165 728 aaPredicted RBP18.37■□□□□ 0.53
PRDM16-210ENST00000607632 GRIPAP1Q4V328 841 aa18.37■□□□□ 0.53
PRDM16-210ENST00000607632 OLFM4Q6UX06 510 aa18.37■□□□□ 0.53
PRDM16-210ENST00000607632 MIER1Q8N108 512 aa18.37■□□□□ 0.53
PRDM16-210ENST00000607632 PSMD1Q99460 953 aa18.37■□□□□ 0.53
PRDM16-210ENST00000607632 KIF3CO14782 793 aa18.36■□□□□ 0.53
PRDM16-210ENST00000607632 CWC25Q9NXE8 425 aaPredicted RBP18.36■□□□□ 0.53
PRDM16-210ENST00000607632 TAF1P21675 1872 aa18.35■□□□□ 0.53
PRDM16-210ENST00000607632 CDHR2Q9BYE9 1310 aa18.35■□□□□ 0.53
PRDM16-210ENST00000607632 IRS4O14654 1257 aaPredicted RBP18.35■□□□□ 0.53
PRDM16-210ENST00000607632 PPEF1O14829 653 aaPredicted RBP18.35■□□□□ 0.53
PRDM16-210ENST00000607632 COL4A1P02462 1669 aa18.34■□□□□ 0.53
PRDM16-210ENST00000607632 BBOX1O75936 387 aa18.34■□□□□ 0.53
PRDM16-210ENST00000607632 GRAPQ13588 217 aa18.34■□□□□ 0.53
PRDM16-210ENST00000607632 GRAPLQ8TC17 118 aaPredicted RBP18.34■□□□□ 0.53
PRDM16-210ENST00000607632 ZNF526Q8TF50 670 aaPredicted RBP18.34■□□□□ 0.53
PRDM16-210ENST00000607632 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
PRDM16-210ENST00000607632 WDR90Q96KV7 1748 aa18.34■□□□□ 0.53
PRDM16-210ENST00000607632 KDM2BQ8NHM5 1336 aa18.33■□□□□ 0.53
PRDM16-210ENST00000607632 GLTPD2A6NH11 291 aa18.33■□□□□ 0.52
PRDM16-210ENST00000607632 NEURL1BA8MQ27 555 aa18.33■□□□□ 0.52
PRDM16-210ENST00000607632 HSP90B1P14625 803 aaKnown RBP18.33■□□□□ 0.52
PRDM16-210ENST00000607632 NEXNQ0ZGT2 675 aa18.33■□□□□ 0.52
PRDM16-210ENST00000607632 DNAAF4Q8WXU2 420 aa18.33■□□□□ 0.52
PRDM16-210ENST00000607632 MYH3P11055 1940 aa18.33■□□□□ 0.52
PRDM16-210ENST00000607632 FKBP5Q13451 457 aaPredicted RBP18.32■□□□□ 0.52
PRDM16-210ENST00000607632 DDX46Q7L014 1031 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms