RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 NUTM1Q86Y26 1132 aa24.49■■□□□ 1.51
NECAB3-220ENST00000606699 IBTKQ9P2D0 1353 aaPredicted RBP24.49■■□□□ 1.51
NECAB3-220ENST00000606699 RIC1Q4ADV7 1423 aa24.49■■□□□ 1.51
NECAB3-220ENST00000606699 ADAMTSL1Q8N6G6 1762 aa24.49■■□□□ 1.51
NECAB3-220ENST00000606699 NGEFQ8N5V2 710 aa24.48■■□□□ 1.51
NECAB3-220ENST00000606699 RPGRQ92834 1020 aaKnown RBP24.48■■□□□ 1.51
NECAB3-220ENST00000606699 EIF4A1P60842 406 aaKnown RBP24.47■■□□□ 1.51
NECAB3-220ENST00000606699 RBM17Q96I25 401 aaKnown RBP24.47■■□□□ 1.51
NECAB3-220ENST00000606699 CRAMP1Q96RY5 1269 aa24.47■■□□□ 1.51
NECAB3-220ENST00000606699 ABCC12Q96J65 1359 aa24.46■■□□□ 1.51
NECAB3-220ENST00000606699 LMOD1P29536 600 aaPredicted RBP24.46■■□□□ 1.51
NECAB3-220ENST00000606699 MAP2K1Q02750 393 aaPredicted RBP24.46■■□□□ 1.51
NECAB3-220ENST00000606699 RRP7AQ9Y3A4 280 aaKnown RBP24.46■■□□□ 1.51
NECAB3-220ENST00000606699 TTLL7Q6ZT98 887 aa24.45■■□□□ 1.5
NECAB3-220ENST00000606699 ZNF34Q8IZ26 560 aa24.44■■□□□ 1.5
NECAB3-220ENST00000606699 LARGE2Q8N3Y3 721 aa24.44■■□□□ 1.5
NECAB3-220ENST00000606699 VPS33BQ9H267 617 aa24.44■■□□□ 1.5
NECAB3-220ENST00000606699 DDX21Q9NR30 783 aaKnown RBP eCLIP24.44■■□□□ 1.5
NECAB3-220ENST00000606699 GJA3Q9Y6H8 435 aa24.44■■□□□ 1.5
NECAB3-220ENST00000606699 ERBB4Q15303 1308 aa24.43■■□□□ 1.5
NECAB3-220ENST00000606699 WDR33Q9C0J8 1336 aaKnown RBP24.43■■□□□ 1.5
NECAB3-220ENST00000606699 SUSD4Q5VX71 490 aa24.43■■□□□ 1.5
NECAB3-220ENST00000606699 GIGYF2Q6Y7W6 1299 aaKnown RBP24.43■■□□□ 1.5
NECAB3-220ENST00000606699 PPP1R42Q7Z4L9 355 aa24.43■■□□□ 1.5
NECAB3-220ENST00000606699 PNNQ9H307 717 aaKnown RBP24.43■■□□□ 1.5
NECAB3-220ENST00000606699 LAMB4A4D0S4 1761 aa24.42■■□□□ 1.5
NECAB3-220ENST00000606699 UBN2Q6ZU65 1347 aa24.42■■□□□ 1.5
NECAB3-220ENST00000606699 MYL6BP14649 208 aa24.42■■□□□ 1.5
NECAB3-220ENST00000606699 GPTP24298 496 aa24.42■■□□□ 1.5
NECAB3-220ENST00000606699 LBX1P52954 281 aa24.42■■□□□ 1.5
NECAB3-220ENST00000606699 USP50Q70EL3 339 aaPredicted RBP24.42■■□□□ 1.5
NECAB3-220ENST00000606699 PLEKHF1Q96S99 279 aa24.42■■□□□ 1.5
NECAB3-220ENST00000606699 ABT1Q9ULW3 272 aaKnown RBP24.42■■□□□ 1.5
NECAB3-220ENST00000606699 PPEF1O14829 653 aaPredicted RBP24.41■■□□□ 1.5
NECAB3-220ENST00000606699 SCNN1DP51172 638 aa24.41■■□□□ 1.5
NECAB3-220ENST00000606699 DDX10Q13206 875 aaKnown RBP24.41■■□□□ 1.5
NECAB3-220ENST00000606699 NFE2L2Q16236 605 aa24.41■■□□□ 1.5
NECAB3-220ENST00000606699 PARP10Q53GL7 1025 aa24.41■■□□□ 1.5
NECAB3-220ENST00000606699 TMX4Q9H1E5 349 aaPredicted RBP24.41■■□□□ 1.5
NECAB3-220ENST00000606699 ZBTB3Q9H5J0 574 aa24.41■■□□□ 1.5
NECAB3-220ENST00000606699 NTSR2O95665 410 aa24.4■■□□□ 1.5
NECAB3-220ENST00000606699 NUP98P52948 1817 aa24.4■■□□□ 1.5
NECAB3-220ENST00000606699 EPS15P42566 896 aa24.39■■□□□ 1.49
NECAB3-220ENST00000606699 NIM1KQ8IY84 436 aa24.39■■□□□ 1.49
NECAB3-220ENST00000606699 NLRP3Q96P20 1036 aa24.39■■□□□ 1.49
NECAB3-220ENST00000606699 HSPA8P11142 646 aaKnown RBP24.38■■□□□ 1.49
NECAB3-220ENST00000606699 SLC10A5Q5PT55 438 aa24.38■■□□□ 1.49
NECAB3-220ENST00000606699 COL4A5P29400 1685 aa24.37■■□□□ 1.49
NECAB3-220ENST00000606699 KDM3BQ7LBC6 1761 aa24.37■■□□□ 1.49
NECAB3-220ENST00000606699 ECE1P42892 770 aa24.37■■□□□ 1.49
NECAB3-220ENST00000606699 ATP6V0A2Q9Y487 856 aa24.36■■□□□ 1.49
NECAB3-220ENST00000606699 ZNF316A6NFI3 1004 aaPredicted RBP24.35■■□□□ 1.49
NECAB3-220ENST00000606699 PPIP5K2O43314 1243 aa24.35■■□□□ 1.49
NECAB3-220ENST00000606699 SUPT20HQ8NEM7 779 aa24.35■■□□□ 1.49
NECAB3-220ENST00000606699 THUMPD2Q9BTF0 503 aaKnown RBP24.35■■□□□ 1.49
NECAB3-220ENST00000606699 UTP14AQ9BVJ6 771 aaKnown RBP24.35■■□□□ 1.49
NECAB3-220ENST00000606699 TCERG1O14776 1098 aaKnown RBP24.34■■□□□ 1.49
NECAB3-220ENST00000606699 C3orf67Q6ZVT6 689 aa24.34■■□□□ 1.49
NECAB3-220ENST00000606699 CAPNS2Q96L46 248 aa24.34■■□□□ 1.49
NECAB3-220ENST00000606699 RTFDC1Q9BY42 306 aaPredicted RBP24.34■■□□□ 1.49
NECAB3-220ENST00000606699 ADARB2Q9NS39 739 aaKnown RBP24.34■■□□□ 1.49
NECAB3-220ENST00000606699 MAPK8IP3Q9UPT6 1336 aa24.34■■□□□ 1.49
NECAB3-220ENST00000606699 BBOX1O75936 387 aa24.33■■□□□ 1.49
NECAB3-220ENST00000606699 CST9Q5W186 159 aa24.33■■□□□ 1.49
NECAB3-220ENST00000606699 LRP10Q7Z4F1 713 aa24.33■■□□□ 1.49
NECAB3-220ENST00000606699 BEGAINQ9BUH8 593 aa24.33■■□□□ 1.49
NECAB3-220ENST00000606699 BABAM1Q9NWV8 329 aa24.33■■□□□ 1.49
NECAB3-220ENST00000606699 GPRC5DQ9NZD1 345 aa24.33■■□□□ 1.49
NECAB3-220ENST00000606699 TSPYL4Q9UJ04 414 aa24.33■■□□□ 1.49
NECAB3-220ENST00000606699 ZNRF3Q9ULT6 936 aa24.33■■□□□ 1.49
NECAB3-220ENST00000606699 LTBP1Q14766 1721 aa24.32■■□□□ 1.48
NECAB3-220ENST00000606699 PDIA6Q15084 440 aa24.32■■□□□ 1.48
NECAB3-220ENST00000606699 AOC3Q16853 763 aa24.32■■□□□ 1.48
NECAB3-220ENST00000606699 GPR101Q96P66 508 aaPredicted RBP24.32■■□□□ 1.48
NECAB3-220ENST00000606699 TLL2Q9Y6L7 1015 aa24.32■■□□□ 1.48
NECAB3-220ENST00000606699 DLG5Q8TDM6 1919 aa24.31■■□□□ 1.48
NECAB3-220ENST00000606699 MAP2K2P36507 400 aa24.3■■□□□ 1.48
NECAB3-220ENST00000606699 FMR1Q06787 632 aaKnown RBP eCLIP24.3■■□□□ 1.48
NECAB3-220ENST00000606699 HSP90AB3PQ58FF7 597 aa24.3■■□□□ 1.48
NECAB3-220ENST00000606699 SP8Q8IXZ3 490 aa24.3■■□□□ 1.48
NECAB3-220ENST00000606699 ABHD8Q96I13 439 aa24.3■■□□□ 1.48
NECAB3-220ENST00000606699 CXCL9Q07325 125 aa24.29■■□□□ 1.48
NECAB3-220ENST00000606699 PAXIP1Q6ZW49 1069 aaPredicted RBP24.29■■□□□ 1.48
NECAB3-220ENST00000606699 PGAP2Q9UHJ9 254 aa24.29■■□□□ 1.48
NECAB3-220ENST00000606699 ABCC4O15439 1325 aa24.29■■□□□ 1.48
NECAB3-220ENST00000606699 CDHR2Q9BYE9 1310 aa24.29■■□□□ 1.48
NECAB3-220ENST00000606699 TRAF5O00463 557 aa24.28■■□□□ 1.48
NECAB3-220ENST00000606699 EIF2S2P20042 333 aaKnown RBP24.28■■□□□ 1.48
NECAB3-220ENST00000606699 CYP4F22Q6NT55 531 aa24.28■■□□□ 1.48
NECAB3-220ENST00000606699 DPP8Q6V1X1 898 aaPredicted RBP24.28■■□□□ 1.48
NECAB3-220ENST00000606699 SLC51AQ86UW1 340 aa24.28■■□□□ 1.48
NECAB3-220ENST00000606699 TNIP1Q15025 636 aa24.27■■□□□ 1.48
NECAB3-220ENST00000606699 MPNDQ8N594 471 aa24.27■■□□□ 1.48
NECAB3-220ENST00000606699 ZC3H15Q8WU90 426 aaKnown RBP24.27■■□□□ 1.48
NECAB3-220ENST00000606699 HHIPL1Q96JK4 782 aa24.27■■□□□ 1.48
NECAB3-220ENST00000606699 KIAA2012Q0VF49 1180 aa24.26■■□□□ 1.47
NECAB3-220ENST00000606699 CIAPIN1Q6FI81 312 aa24.26■■□□□ 1.47
NECAB3-220ENST00000606699 THSD7BQ9C0I4 1608 aa24.25■■□□□ 1.47
NECAB3-220ENST00000606699 GMPSP49915 693 aaPredicted RBP24.25■■□□□ 1.47
NECAB3-220ENST00000606699 RIPK4P57078 832 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms