RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 MYD88Q99836 296 aa29.45■■■□□ 2.31
SNX5-217ENST00000606557 ARFGEF1Q9Y6D6 1849 aa29.44■■■□□ 2.3
SNX5-217ENST00000606557 TRIM28Q13263 835 aaKnown RBP29.44■■■□□ 2.3
SNX5-217ENST00000606557 UTP14AQ9BVJ6 771 aaKnown RBP29.44■■■□□ 2.3
SNX5-217ENST00000606557 GOLGB1Q14789 3259 aaKnown RBP29.44■■■□□ 2.3
SNX5-217ENST00000606557 RNF123Q5XPI4 1314 aa29.44■■■□□ 2.3
SNX5-217ENST00000606557 KCNA3P22001 575 aa29.43■■■□□ 2.3
SNX5-217ENST00000606557 GTF2E1P29083 439 aaPredicted RBP29.43■■■□□ 2.3
SNX5-217ENST00000606557 CHRNA5P30532 468 aa29.43■■■□□ 2.3
SNX5-217ENST00000606557 ERFEQ4G0M1 354 aa29.43■■■□□ 2.3
SNX5-217ENST00000606557 BCL2L13Q9BXK5 485 aa29.43■■■□□ 2.3
SNX5-217ENST00000606557 PDE6BP35913 854 aa29.42■■■□□ 2.3
SNX5-217ENST00000606557 DNAAF4Q8WXU2 420 aa29.41■■■□□ 2.3
SNX5-217ENST00000606557 SMC4Q9NTJ3 1288 aa29.41■■■□□ 2.3
SNX5-217ENST00000606557 C2CD5Q86YS7 1000 aa29.4■■■□□ 2.3
SNX5-217ENST00000606557 IGKV5-2P06315 115 aa29.39■■■□□ 2.3
SNX5-217ENST00000606557 RARSP54136 660 aaKnown RBP29.39■■■□□ 2.3
SNX5-217ENST00000606557 TRMT112Q9UI30 125 aaKnown RBP29.39■■■□□ 2.3
SNX5-217ENST00000606557 PDZRN3Q9UPQ7 1066 aa29.39■■■□□ 2.3
SNX5-217ENST00000606557 KLRG2A4D1S0 409 aaPredicted RBP29.38■■■□□ 2.29
SNX5-217ENST00000606557 F6X3S4 739 aa29.38■■■□□ 2.29
SNX5-217ENST00000606557 H0YIN7 160 aa29.38■■■□□ 2.29
SNX5-217ENST00000606557 NEXNQ0ZGT2 675 aa29.38■■■□□ 2.29
SNX5-217ENST00000606557 CCDC191Q8NCU4 936 aa29.38■■■□□ 2.29
SNX5-217ENST00000606557 PTPRCP08575 1304 aa29.38■■■□□ 2.29
SNX5-217ENST00000606557 SH3TC1Q8TE82 1336 aa29.38■■■□□ 2.29
SNX5-217ENST00000606557 WWC3Q9ULE0 1092 aa29.37■■■□□ 2.29
SNX5-217ENST00000606557 YBX3P16989 372 aaKnown RBP eCLIP29.36■■■□□ 2.29
SNX5-217ENST00000606557 BRPF1P55201 1214 aaPredicted RBP29.36■■■□□ 2.29
SNX5-217ENST00000606557 SLC10A5Q5PT55 438 aa29.36■■■□□ 2.29
SNX5-217ENST00000606557 SYNE4Q8N205 404 aa29.36■■■□□ 2.29
SNX5-217ENST00000606557 CWC25Q9NXE8 425 aaPredicted RBP29.36■■■□□ 2.29
SNX5-217ENST00000606557 MYH3P11055 1940 aa29.35■■■□□ 2.29
SNX5-217ENST00000606557 NEURL1BA8MQ27 555 aa29.35■■■□□ 2.29
SNX5-217ENST00000606557 CWF19L2Q2TBE0 894 aaKnown RBP29.35■■■□□ 2.29
SNX5-217ENST00000606557 PELP1Q8IZL8 1130 aaKnown RBP29.35■■■□□ 2.29
SNX5-217ENST00000606557 PIM2Q9P1W9 311 aa29.35■■■□□ 2.29
SNX5-217ENST00000606557 SRGNP10124 158 aa29.34■■■□□ 2.29
SNX5-217ENST00000606557 GPR162Q16538 588 aa29.34■■■□□ 2.29
SNX5-217ENST00000606557 SLX4Q8IY92 1834 aa29.34■■■□□ 2.29
SNX5-217ENST00000606557 CRY2Q49AN0 593 aa29.33■■■□□ 2.29
SNX5-217ENST00000606557 LINS1Q8NG48 757 aa29.33■■■□□ 2.29
SNX5-217ENST00000606557 FAM89AQ96GI7 184 aa29.33■■■□□ 2.29
SNX5-217ENST00000606557 DCAF8L1A6NGE4 600 aa29.32■■■□□ 2.28
SNX5-217ENST00000606557 ZBTB38Q8NAP3 1195 aaPredicted RBP29.32■■■□□ 2.28
SNX5-217ENST00000606557 YTHDC1Q96MU7 727 aaKnown RBP29.32■■■□□ 2.28
SNX5-217ENST00000606557 UTRNP46939 3433 aa29.31■■■□□ 2.28
SNX5-217ENST00000606557 PCCAP05165 728 aaPredicted RBP29.31■■■□□ 2.28
SNX5-217ENST00000606557 BEND3Q5T5X7 828 aa29.31■■■□□ 2.28
SNX5-217ENST00000606557 C3orf67Q6ZVT6 689 aa29.31■■■□□ 2.28
SNX5-217ENST00000606557 BCS1LQ9Y276 419 aa29.31■■■□□ 2.28
SNX5-217ENST00000606557 HCLS1P14317 486 aaPredicted RBP29.3■■■□□ 2.28
SNX5-217ENST00000606557 DALRD3Q5D0E6 543 aaKnown RBP29.3■■■□□ 2.28
SNX5-217ENST00000606557 RTL5Q5HYW3 569 aaPredicted RBP29.3■■■□□ 2.28
SNX5-217ENST00000606557 STYK1Q6J9G0 422 aa29.3■■■□□ 2.28
SNX5-217ENST00000606557 MASTLQ96GX5 879 aa29.3■■■□□ 2.28
SNX5-217ENST00000606557 CHD4Q14839 1912 aa29.3■■■□□ 2.28
SNX5-217ENST00000606557 KIF16BQ96L93 1317 aa29.29■■■□□ 2.28
SNX5-217ENST00000606557 NPR1P16066 1061 aa29.29■■■□□ 2.28
SNX5-217ENST00000606557 ZNF622Q969S3 477 aaKnown RBP eCLIP29.29■■■□□ 2.28
SNX5-217ENST00000606557 NOB1Q9ULX3 412 aaKnown RBP29.29■■■□□ 2.28
SNX5-217ENST00000606557 TAF1P21675 1872 aa29.28■■■□□ 2.28
SNX5-217ENST00000606557 GCKRQ14397 625 aa29.28■■■□□ 2.28
SNX5-217ENST00000606557 TTLL6Q8N841 843 aa29.28■■■□□ 2.28
SNX5-217ENST00000606557 NLRP3Q96P20 1036 aa29.28■■■□□ 2.28
SNX5-217ENST00000606557 IRS4O14654 1257 aaPredicted RBP29.27■■■□□ 2.28
SNX5-217ENST00000606557 BCAR3O75815 825 aa29.27■■■□□ 2.28
SNX5-217ENST00000606557 SLC4A10Q6U841 1118 aa29.27■■■□□ 2.28
SNX5-217ENST00000606557 CDHR2Q9BYE9 1310 aa29.26■■■□□ 2.27
SNX5-217ENST00000606557 JARID2Q92833 1246 aaPredicted RBP29.26■■■□□ 2.27
SNX5-217ENST00000606557 RPGRQ92834 1020 aaKnown RBP29.25■■■□□ 2.27
SNX5-217ENST00000606557 CNKSR1Q969H4 720 aa29.25■■■□□ 2.27
SNX5-217ENST00000606557 H7C1W4 665 aa29.24■■■□□ 2.27
SNX5-217ENST00000606557 GRIN3BO60391 1043 aa29.24■■■□□ 2.27
SNX5-217ENST00000606557 HOXA10P31260 410 aaPredicted RBP29.24■■■□□ 2.27
SNX5-217ENST00000606557 SRCIN1Q9C0H9 1055 aa29.24■■■□□ 2.27
SNX5-217ENST00000606557 ALDH1L1O75891 902 aa29.23■■■□□ 2.27
SNX5-217ENST00000606557 FER1L6Q2WGJ9 1857 aa29.23■■■□□ 2.27
SNX5-217ENST00000606557 PRPF40BQ6NWY9 871 aaKnown RBP29.22■■■□□ 2.27
SNX5-217ENST00000606557 UBE3BQ7Z3V4 1068 aa29.22■■■□□ 2.27
SNX5-217ENST00000606557 ARHGAP45Q92619 1136 aa29.22■■■□□ 2.27
SNX5-217ENST00000606557 API5Q9BZZ5 524 aaKnown RBP29.22■■■□□ 2.27
SNX5-217ENST00000606557 HSP90B1P14625 803 aaKnown RBP29.21■■■□□ 2.27
SNX5-217ENST00000606557 CASP7P55210 303 aa29.21■■■□□ 2.27
SNX5-217ENST00000606557 ALDH1B1P30837 517 aa29.2■■■□□ 2.26
SNX5-217ENST00000606557 SF3B3Q15393 1217 aaKnown RBP29.2■■■□□ 2.26
SNX5-217ENST00000606557 RBM17Q96I25 401 aaKnown RBP29.2■■■□□ 2.26
SNX5-217ENST00000606557 PDE8AO60658 829 aa29.19■■■□□ 2.26
SNX5-217ENST00000606557 CRAMP1Q96RY5 1269 aa29.19■■■□□ 2.26
SNX5-217ENST00000606557 SBF1O95248 1867 aa29.19■■■□□ 2.26
SNX5-217ENST00000606557 COL4A1P02462 1669 aa29.18■■■□□ 2.26
SNX5-217ENST00000606557 GRM8O00222 908 aa29.17■■■□□ 2.26
SNX5-217ENST00000606557 IPO8O15397 1037 aaKnown RBP29.17■■■□□ 2.26
SNX5-217ENST00000606557 FRAT1Q92837 279 aaPredicted RBP29.17■■■□□ 2.26
SNX5-217ENST00000606557 ABCC4O15439 1325 aa29.17■■■□□ 2.26
SNX5-217ENST00000606557 CCDC88AQ3V6T2 1871 aa29.17■■■□□ 2.26
SNX5-217ENST00000606557 SPEF2Q9C093 1822 aa29.16■■■□□ 2.26
SNX5-217ENST00000606557 TRIM27P14373 513 aa29.16■■■□□ 2.26
SNX5-217ENST00000606557 PLA2G12BQ9BX93 195 aa29.16■■■□□ 2.26
SNX5-217ENST00000606557 LRRC37AA6NMS7 1700 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms