RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 CCDC24Q8N4L8 307 aa24.74■■□□□ 1.55
SRSF4-206ENST00000605204 ZNF622Q969S3 477 aaKnown RBP eCLIP24.74■■□□□ 1.551e-6■□□□□ 11
SRSF4-206ENST00000605204 CCDC88AQ3V6T2 1871 aa24.74■■□□□ 1.55
SRSF4-206ENST00000605204 FAM177BA6PVY3 158 aa24.73■■□□□ 1.55
SRSF4-206ENST00000605204 DDX58O95786 925 aaKnown RBP24.73■■□□□ 1.55
SRSF4-206ENST00000605204 APLP1P51693 650 aa24.73■■□□□ 1.55
SRSF4-206ENST00000605204 PRELPP51888 382 aa24.73■■□□□ 1.55
SRSF4-206ENST00000605204 UTP14AQ9BVJ6 771 aaKnown RBP24.73■■□□□ 1.55
SRSF4-206ENST00000605204 NTSR2O95665 410 aa24.72■■□□□ 1.55
SRSF4-206ENST00000605204 SOGA3Q5TF21 947 aa24.72■■□□□ 1.55
SRSF4-206ENST00000605204 SUSD4Q5VX71 490 aa24.72■■□□□ 1.55
SRSF4-206ENST00000605204 DIEXFQ68CQ4 756 aaKnown RBP24.72■■□□□ 1.55
SRSF4-206ENST00000605204 TSPYL6Q8N831 410 aa24.72■■□□□ 1.55
SRSF4-206ENST00000605204 ZNF521Q96K83 1311 aa24.72■■□□□ 1.55
SRSF4-206ENST00000605204 CRY2Q49AN0 593 aa24.71■■□□□ 1.55
SRSF4-206ENST00000605204 CACNA1SQ13698 1873 aa24.71■■□□□ 1.55
SRSF4-206ENST00000605204 ABCC12Q96J65 1359 aa24.7■■□□□ 1.55
SRSF4-206ENST00000605204 HTRA3P83110 453 aa24.7■■□□□ 1.55
SRSF4-206ENST00000605204 NLRP10Q86W26 655 aa24.7■■□□□ 1.55
SRSF4-206ENST00000605204 NUTM1Q86Y26 1132 aa24.69■■□□□ 1.54
SRSF4-206ENST00000605204 DNAJC5GQ8N7S2 189 aa24.69■■□□□ 1.54
SRSF4-206ENST00000605204 RBM46Q8TBY0 533 aaKnown RBP24.69■■□□□ 1.54
SRSF4-206ENST00000605204 ALDH1B1P30837 517 aa24.68■■□□□ 1.54
SRSF4-206ENST00000605204 TRIM28Q13263 835 aaKnown RBP24.68■■□□□ 1.54
SRSF4-206ENST00000605204 ERFEQ4G0M1 354 aa24.68■■□□□ 1.54
SRSF4-206ENST00000605204 RIC3Q7Z5B4 369 aa24.68■■□□□ 1.54
SRSF4-206ENST00000605204 SLC10A5Q5PT55 438 aa24.67■■□□□ 1.54
SRSF4-206ENST00000605204 PRPF40BQ6NWY9 871 aaKnown RBP24.67■■□□□ 1.54
SRSF4-206ENST00000605204 ANKRD36CQ5JPF3 1778 aa24.67■■□□□ 1.54
SRSF4-206ENST00000605204 ISCA1Q9BUE6 129 aa24.67■■□□□ 1.54
SRSF4-206ENST00000605204 ARFGEF2Q9Y6D5 1785 aa24.66■■□□□ 1.54
SRSF4-206ENST00000605204 KDM2BQ8NHM5 1336 aa24.66■■□□□ 1.54
SRSF4-206ENST00000605204 SH3TC1Q8TE82 1336 aa24.66■■□□□ 1.54
SRSF4-206ENST00000605204 FER1L6Q2WGJ9 1857 aa24.66■■□□□ 1.54
SRSF4-206ENST00000605204 RPGRQ92834 1020 aaKnown RBP24.66■■□□□ 1.54
SRSF4-206ENST00000605204 NLRP3Q96P20 1036 aa24.66■■□□□ 1.54
SRSF4-206ENST00000605204 PHAXQ9H814 394 aaKnown RBP24.66■■□□□ 1.54
SRSF4-206ENST00000605204 PCNTO95613 3336 aa24.65■■□□□ 1.54
SRSF4-206ENST00000605204 TRMT112Q9UI30 125 aaKnown RBP24.65■■□□□ 1.54
SRSF4-206ENST00000605204 ZC3H4Q9UPT8 1303 aaKnown RBP24.64■■□□□ 1.54
SRSF4-206ENST00000605204 E9PSI1 815 aa24.64■■□□□ 1.53
SRSF4-206ENST00000605204 NFKBIEO00221 500 aa24.64■■□□□ 1.53
SRSF4-206ENST00000605204 HSP90B1P14625 803 aaKnown RBP24.64■■□□□ 1.53
SRSF4-206ENST00000605204 HOXA10P31260 410 aaPredicted RBP24.64■■□□□ 1.53
SRSF4-206ENST00000605204 EXOSC9Q06265 439 aaKnown RBP24.64■■□□□ 1.53
SRSF4-206ENST00000605204 RRAGCQ9HB90 399 aa24.64■■□□□ 1.53
SRSF4-206ENST00000605204 DICER1Q9UPY3 1922 aaKnown RBP24.63■■□□□ 1.53
SRSF4-206ENST00000605204 VAMP4O75379 141 aa24.63■■□□□ 1.53
SRSF4-206ENST00000605204 SPINK5Q9NQ38 1064 aaPredicted RBP24.63■■□□□ 1.53
SRSF4-206ENST00000605204 LTBP3Q9NS15 1303 aa24.63■■□□□ 1.53
SRSF4-206ENST00000605204 C21orf2O43822 256 aa24.62■■□□□ 1.53
SRSF4-206ENST00000605204 SLC4A2P04920 1241 aa24.62■■□□□ 1.53
SRSF4-206ENST00000605204 KSR2Q6VAB6 950 aa24.62■■□□□ 1.53
SRSF4-206ENST00000605204 C16orf71Q8IYS4 520 aaPredicted RBP24.62■■□□□ 1.53
SRSF4-206ENST00000605204 LMNB1P20700 586 aa24.61■■□□□ 1.53
SRSF4-206ENST00000605204 GRIPAP1Q4V328 841 aa24.61■■□□□ 1.53
SRSF4-206ENST00000605204 CCDC93Q567U6 631 aa24.61■■□□□ 1.53
SRSF4-206ENST00000605204 CC2D2BQ6DHV5 1058 aa24.61■■□□□ 1.53
SRSF4-206ENST00000605204 CCDC191Q8NCU4 936 aa24.61■■□□□ 1.53
SRSF4-206ENST00000605204 RBM17Q96I25 401 aaKnown RBP24.61■■□□□ 1.53
SRSF4-206ENST00000605204 CRAMP1Q96RY5 1269 aa24.61■■□□□ 1.53
SRSF4-206ENST00000605204 METTL22Q9BUU2 404 aaPredicted RBP24.6■■□□□ 1.53
SRSF4-206ENST00000605204 SLX4Q8IY92 1834 aa24.6■■□□□ 1.53
SRSF4-206ENST00000605204 ATP5J2-PTCD1G3V325 749 aa24.59■■□□□ 1.53
SRSF4-206ENST00000605204 NEXNQ0ZGT2 675 aa24.59■■□□□ 1.53
SRSF4-206ENST00000605204 FSTL1Q12841 308 aa24.59■■□□□ 1.53
SRSF4-206ENST00000605204 C7orf43Q8WVR3 580 aa24.59■■□□□ 1.53
SRSF4-206ENST00000605204 TAOK3Q9H2K8 898 aa24.59■■□□□ 1.53
SRSF4-206ENST00000605204 RTKN2Q8IZC4 609 aa24.58■■□□□ 1.53
SRSF4-206ENST00000605204 MAP3K2Q9Y2U5 619 aa24.58■■□□□ 1.53
SRSF4-206ENST00000605204 PI4KAP2A4QPH2 592 aa24.57■■□□□ 1.52
SRSF4-206ENST00000605204 FLIIQ13045 1269 aa24.57■■□□□ 1.52
SRSF4-206ENST00000605204 PI4KAP1Q8N8J0 262 aa24.57■■□□□ 1.52
SRSF4-206ENST00000605204 ZBTB38Q8NAP3 1195 aaPredicted RBP24.57■■□□□ 1.52
SRSF4-206ENST00000605204 MYD88Q99836 296 aa24.57■■□□□ 1.52
SRSF4-206ENST00000605204 CWC25Q9NXE8 425 aaPredicted RBP24.57■■□□□ 1.52
SRSF4-206ENST00000605204 MIER1Q8N108 512 aa24.56■■□□□ 1.52
SRSF4-206ENST00000605204 ZNF428Q96B54 188 aa24.56■■□□□ 1.52
SRSF4-206ENST00000605204 KLRG1Q96E93 195 aa24.55■■□□□ 1.52
SRSF4-206ENST00000605204 TMX4Q9H1E5 349 aaPredicted RBP24.55■■□□□ 1.52
SRSF4-206ENST00000605204 TCERG1O14776 1098 aaKnown RBP24.54■■□□□ 1.52
SRSF4-206ENST00000605204 HCLS1P14317 486 aaPredicted RBP24.54■■□□□ 1.52
SRSF4-206ENST00000605204 SLFN5Q08AF3 891 aa24.54■■□□□ 1.52
SRSF4-206ENST00000605204 FKBP5Q13451 457 aaPredicted RBP24.54■■□□□ 1.52
SRSF4-206ENST00000605204 ZNF219Q9P2Y4 722 aaPredicted RBP24.54■■□□□ 1.52
SRSF4-206ENST00000605204 GLTPD2A6NH11 291 aa24.54■■□□□ 1.52
SRSF4-206ENST00000605204 PCCAP05165 728 aaPredicted RBP24.54■■□□□ 1.52
SRSF4-206ENST00000605204 FAM89AQ96GI7 184 aa24.54■■□□□ 1.52
SRSF4-206ENST00000605204 C3orf67Q6ZVT6 689 aa24.53■■□□□ 1.52
SRSF4-206ENST00000605204 DDX46Q7L014 1031 aaKnown RBP24.53■■□□□ 1.52
SRSF4-206ENST00000605204 TMC4Q7Z404 712 aa24.53■■□□□ 1.52
SRSF4-206ENST00000605204 SMC1BQ8NDV3 1235 aa24.53■■□□□ 1.52
SRSF4-206ENST00000605204 IRS4O14654 1257 aaPredicted RBP24.52■■□□□ 1.52
SRSF4-206ENST00000605204 PPEF1O14829 653 aaPredicted RBP24.52■■□□□ 1.52
SRSF4-206ENST00000605204 BBOX1O75936 387 aa24.52■■□□□ 1.52
SRSF4-206ENST00000605204 FKBP4Q02790 459 aaKnown RBP eCLIP24.52■■□□□ 1.52
SRSF4-206ENST00000605204 SF3B3Q15393 1217 aaKnown RBP24.52■■□□□ 1.52
SRSF4-206ENST00000605204 G2E3Q7L622 706 aa24.52■■□□□ 1.52
SRSF4-206ENST00000605204 JMYQ8N9B5 988 aa24.51■■□□□ 1.51
SRSF4-206ENST00000605204 DNAAF4Q8WXU2 420 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms