RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 RTL5Q5HYW3 569 aaPredicted RBP28.91■■■□□ 2.22
IRF3-227ENST00000600911 SUSD4Q5VX71 490 aa28.91■■■□□ 2.22
IRF3-227ENST00000600911 CWC25Q9NXE8 425 aaPredicted RBP28.91■■■□□ 2.22
IRF3-227ENST00000600911 GRM8O00222 908 aa28.91■■■□□ 2.22
IRF3-227ENST00000600911 MSH5O43196 834 aa28.91■■■□□ 2.22
IRF3-227ENST00000600911 CCDC191Q8NCU4 936 aa28.91■■■□□ 2.22
IRF3-227ENST00000600911 PCDHB15Q9Y5E8 787 aa28.91■■■□□ 2.22
IRF3-227ENST00000600911 UTYO14607 1347 aa28.9■■■□□ 2.22
IRF3-227ENST00000600911 FAM177BA6PVY3 158 aa28.9■■■□□ 2.22
IRF3-227ENST00000600911 KAZALD1Q96I82 304 aa28.9■■■□□ 2.22
IRF3-227ENST00000600911 IBTKQ9P2D0 1353 aaPredicted RBP28.89■■■□□ 2.22
IRF3-227ENST00000600911 CASZ1Q86V15 1759 aa28.89■■■□□ 2.22
IRF3-227ENST00000600911 ZNF652Q9Y2D9 606 aa28.89■■■□□ 2.22
IRF3-227ENST00000600911 NFIXQ14938 502 aa28.88■■■□□ 2.21
IRF3-227ENST00000600911 DDX60Q8IY21 1712 aaKnown RBP28.88■■■□□ 2.21
IRF3-227ENST00000600911 H7C1W4 665 aa28.87■■■□□ 2.21
IRF3-227ENST00000600911 UBE3BQ7Z3V4 1068 aa28.87■■■□□ 2.21
IRF3-227ENST00000600911 SUCLG2Q96I99 432 aa28.87■■■□□ 2.21
IRF3-227ENST00000600911 C9orf78Q9NZ63 289 aaPredicted RBP28.87■■■□□ 2.21
IRF3-227ENST00000600911 RGL2O15211 777 aa28.87■■■□□ 2.21
IRF3-227ENST00000600911 FAM89AQ96GI7 184 aa28.87■■■□□ 2.21
IRF3-227ENST00000600911 LRRFIP2Q9Y608 721 aaKnown RBP28.87■■■□□ 2.21
IRF3-227ENST00000600911 NTSR2O95665 410 aa28.86■■■□□ 2.21
IRF3-227ENST00000600911 EPHA10Q5JZY3 1008 aa28.86■■■□□ 2.21
IRF3-227ENST00000600911 MSL1Q68DK7 614 aa28.86■■■□□ 2.21
IRF3-227ENST00000600911 FLAD1Q8NFF5 587 aa28.86■■■□□ 2.21
IRF3-227ENST00000600911 UBTFL1P0CB47 393 aaPredicted RBP28.84■■■□□ 2.21
IRF3-227ENST00000600911 TM4SF1P30408 202 aa28.83■■■□□ 2.21
IRF3-227ENST00000600911 DDR1Q08345 913 aa28.83■■■□□ 2.21
IRF3-227ENST00000600911 NUTM1Q86Y26 1132 aa28.83■■■□□ 2.21
IRF3-227ENST00000600911 LAMB2P55268 1798 aa28.83■■■□□ 2.21
IRF3-227ENST00000600911 PCCAP05165 728 aaPredicted RBP28.83■■■□□ 2.21
IRF3-227ENST00000600911 GNAI3P08754 354 aa28.83■■■□□ 2.21
IRF3-227ENST00000600911 SIRT2Q8IXJ6 389 aa28.83■■■□□ 2.21
IRF3-227ENST00000600911 R3HDM1Q15032 1099 aaKnown RBP28.82■■■□□ 2.2
IRF3-227ENST00000600911 PARP10Q53GL7 1025 aa28.82■■■□□ 2.2
IRF3-227ENST00000600911 CCDC24Q8N4L8 307 aa28.82■■■□□ 2.2
IRF3-227ENST00000600911 ZBTB38Q8NAP3 1195 aaPredicted RBP28.82■■■□□ 2.2
IRF3-227ENST00000600911 TRMT112Q9UI30 125 aaKnown RBP28.82■■■□□ 2.2
IRF3-227ENST00000600911 MYH3P11055 1940 aa28.81■■■□□ 2.2
IRF3-227ENST00000600911 SETDB2Q96T68 719 aa28.81■■■□□ 2.2
IRF3-227ENST00000600911 GNAI2P04899 355 aa28.8■■■□□ 2.2
IRF3-227ENST00000600911 NRXN2Q9P2S2 1712 aa28.8■■■□□ 2.2
IRF3-227ENST00000600911 TNRC6CQ9HCJ0 1690 aaKnown RBP28.8■■■□□ 2.2
IRF3-227ENST00000600911 ABCC12Q96J65 1359 aa28.8■■■□□ 2.2
IRF3-227ENST00000600911 ERICH6BQ5W0A0 696 aa28.8■■■□□ 2.2
IRF3-227ENST00000600911 CEP85Q6P2H3 762 aa28.8■■■□□ 2.2
IRF3-227ENST00000600911 UTP14AQ9BVJ6 771 aaKnown RBP28.8■■■□□ 2.2
IRF3-227ENST00000600911 BICC1Q9H694 974 aaKnown RBP28.8■■■□□ 2.2
IRF3-227ENST00000600911 PSDA5PKW4 1024 aaPredicted RBP28.79■■■□□ 2.2
IRF3-227ENST00000600911 B4GALNT3Q6L9W6 998 aa28.79■■■□□ 2.2
IRF3-227ENST00000600911 ANKRD44Q8N8A2 993 aa28.79■■■□□ 2.2
IRF3-227ENST00000600911 POLRMTO00411 1230 aaKnown RBP28.78■■■□□ 2.2
IRF3-227ENST00000600911 FOXO4P98177 505 aa28.78■■■□□ 2.2
IRF3-227ENST00000600911 ERFEQ4G0M1 354 aa28.78■■■□□ 2.2
IRF3-227ENST00000600911 CARMIL3Q8ND23 1372 aa28.77■■■□□ 2.2
IRF3-227ENST00000600911 CDHR2Q9BYE9 1310 aa28.77■■■□□ 2.2
IRF3-227ENST00000600911 PNMA6EA0A0J9YXQ4 647 aa28.76■■■□□ 2.2
IRF3-227ENST00000600911 IGHDP01880 384 aa28.76■■■□□ 2.2
IRF3-227ENST00000600911 PPP1R42Q7Z4L9 355 aa28.76■■■□□ 2.2
IRF3-227ENST00000600911 PPP4R2Q9NY27 417 aa28.76■■■□□ 2.2
IRF3-227ENST00000600911 HCLS1P14317 486 aaPredicted RBP28.76■■■□□ 2.19
IRF3-227ENST00000600911 SH3TC1Q8TE82 1336 aa28.75■■■□□ 2.19
IRF3-227ENST00000600911 IRS4O14654 1257 aaPredicted RBP28.75■■■□□ 2.19
IRF3-227ENST00000600911 C3orf67Q6ZVT6 689 aa28.75■■■□□ 2.19
IRF3-227ENST00000600911 NLGN1Q8N2Q7 840 aa28.75■■■□□ 2.19
IRF3-227ENST00000600911 CHMP4BQ9H444 224 aaKnown RBP28.75■■■□□ 2.19
IRF3-227ENST00000600911 ANKRD31Q8N7Z5 1873 aa28.75■■■□□ 2.19
IRF3-227ENST00000600911 COL4A1P02462 1669 aa28.75■■■□□ 2.19
IRF3-227ENST00000600911 NBPF5PQ86XG9 351 aaPredicted RBP28.74■■■□□ 2.19
IRF3-227ENST00000600911 SERPINB2P05120 415 aa28.73■■■□□ 2.19
IRF3-227ENST00000600911 MMP10P09238 476 aa28.73■■■□□ 2.19
IRF3-227ENST00000600911 AAMPQ13685 434 aa28.73■■■□□ 2.19
IRF3-227ENST00000600911 PRR5LQ6MZQ0 368 aa28.72■■■□□ 2.19
IRF3-227ENST00000600911 TAF1P21675 1872 aa28.72■■■□□ 2.19
IRF3-227ENST00000600911 PLA2G12BQ9BX93 195 aa28.72■■■□□ 2.19
IRF3-227ENST00000600911 ZBTB7AO95365 584 aa28.71■■■□□ 2.19
IRF3-227ENST00000600911 ATP8B2P98198 1209 aa28.71■■■□□ 2.19
IRF3-227ENST00000600911 RABL6Q3YEC7 729 aaPredicted RBP28.71■■■□□ 2.19
IRF3-227ENST00000600911 CCDC85AQ96PX6 553 aaPredicted RBP28.71■■■□□ 2.19
IRF3-227ENST00000600911 LMBR1LQ6UX01 489 aa28.69■■■□□ 2.18
IRF3-227ENST00000600911 MTX1Q13505 466 aa28.68■■■□□ 2.18
IRF3-227ENST00000600911 TPTE2Q6XPS3 522 aa28.68■■■□□ 2.18
IRF3-227ENST00000600911 RPAP2Q8IXW5 612 aaPredicted RBP28.68■■■□□ 2.18
IRF3-227ENST00000600911 CNBD1Q8NA66 436 aa28.68■■■□□ 2.18
IRF3-227ENST00000600911 CCDC136Q96JN2 1154 aa28.68■■■□□ 2.18
IRF3-227ENST00000600911 NYXQ9GZU5 481 aa28.68■■■□□ 2.18
IRF3-227ENST00000600911 PDE8AO60658 829 aa28.67■■■□□ 2.18
IRF3-227ENST00000600911 POLA2Q14181 598 aa28.67■■■□□ 2.18
IRF3-227ENST00000600911 CSF1RP07333 972 aa28.66■■■□□ 2.18
IRF3-227ENST00000600911 CTSWP56202 376 aa28.66■■■□□ 2.18
IRF3-227ENST00000600911 SLC10A5Q5PT55 438 aa28.66■■■□□ 2.18
IRF3-227ENST00000600911 TTLL11Q8NHH1 800 aa28.66■■■□□ 2.18
IRF3-227ENST00000600911 KLHDC4Q8TBB5 520 aa28.66■■■□□ 2.18
IRF3-227ENST00000600911 KDM2BQ8NHM5 1336 aa28.66■■■□□ 2.18
IRF3-227ENST00000600911 SRGAP3O43295 1099 aa28.65■■■□□ 2.18
IRF3-227ENST00000600911 RFX5P48382 616 aaPredicted RBP28.65■■■□□ 2.18
IRF3-227ENST00000600911 SSH3Q8TE77 659 aa28.65■■■□□ 2.18
IRF3-227ENST00000600911 SLC16A10Q8TF71 515 aa28.65■■■□□ 2.18
IRF3-227ENST00000600911 ATF5Q9Y2D1 282 aaPredicted RBP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms