RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 DNAAF4Q8WXU2 420 aa22.09■■□□□ 1.13
ARHGEF1-221ENST00000600387 SPATA32Q96LK8 384 aa22.09■■□□□ 1.13
ARHGEF1-221ENST00000600387 C16orf45Q96MC5 204 aaPredicted RBP22.09■■□□□ 1.13
ARHGEF1-221ENST00000600387 RBM8AQ9Y5S9 174 aaKnown RBP22.09■■□□□ 1.13
ARHGEF1-221ENST00000600387 MTX1Q13505 466 aa22.09■■□□□ 1.13
ARHGEF1-221ENST00000600387 CKAP2LQ8IYA6 745 aa22.09■■□□□ 1.13
ARHGEF1-221ENST00000600387 FERMT3Q86UX7 667 aa22.08■■□□□ 1.13
ARHGEF1-221ENST00000600387 ERC1Q8IUD2 1116 aa22.08■■□□□ 1.13
ARHGEF1-221ENST00000600387 ALDH8A1Q9H2A2 487 aaPredicted RBP22.08■■□□□ 1.13
ARHGEF1-221ENST00000600387 CDC25BP30305 580 aa22.08■■□□□ 1.12
ARHGEF1-221ENST00000600387 LRMPQ12912 555 aa22.08■■□□□ 1.12
ARHGEF1-221ENST00000600387 MAP4K1Q92918 833 aa22.08■■□□□ 1.12
ARHGEF1-221ENST00000600387 KCNJ4P48050 445 aa22.07■■□□□ 1.12
ARHGEF1-221ENST00000600387 CCDC112Q8NEF3 446 aa22.07■■□□□ 1.12
ARHGEF1-221ENST00000600387 CTNNA3Q9UI47 895 aa22.07■■□□□ 1.12
ARHGEF1-221ENST00000600387 NWD1Q149M9 1564 aa22.07■■□□□ 1.12
ARHGEF1-221ENST00000600387 DTNBO60941 627 aa22.06■■□□□ 1.12
ARHGEF1-221ENST00000600387 HOXB7P09629 217 aa22.06■■□□□ 1.12
ARHGEF1-221ENST00000600387 IFIT2P09913 472 aaKnown RBP22.06■■□□□ 1.12
ARHGEF1-221ENST00000600387 NRBP1Q9UHY1 535 aa22.06■■□□□ 1.12
ARHGEF1-221ENST00000600387 PIK3C2AO00443 1686 aa22.06■■□□□ 1.12
ARHGEF1-221ENST00000600387 LEO1Q8WVC0 666 aaPredicted RBP22.06■■□□□ 1.12
ARHGEF1-221ENST00000600387 ADAMTS13Q76LX8 1427 aa22.05■■□□□ 1.12
ARHGEF1-221ENST00000600387 ZNF165P49910 485 aa22.05■■□□□ 1.12
ARHGEF1-221ENST00000600387 RNF20Q5VTR2 975 aa22.05■■□□□ 1.12
ARHGEF1-221ENST00000600387 SNRKQ9NRH2 765 aa22.05■■□□□ 1.12
ARHGEF1-221ENST00000600387 CLIP2Q9UDT6 1046 aa22.05■■□□□ 1.12
ARHGEF1-221ENST00000600387 GABPB1Q06547 395 aaPredicted RBP22.05■■□□□ 1.12
ARHGEF1-221ENST00000600387 FAM173BQ6P4H8 233 aa22.05■■□□□ 1.12
ARHGEF1-221ENST00000600387 BLOC1S2Q6QNY1 142 aa22.05■■□□□ 1.12
ARHGEF1-221ENST00000600387 PI4KAP2A4QPH2 592 aa22.04■■□□□ 1.12
ARHGEF1-221ENST00000600387 SLC27A2O14975 620 aa22.04■■□□□ 1.12
ARHGEF1-221ENST00000600387 TPD52L1Q16890 204 aaPredicted RBP22.04■■□□□ 1.12
ARHGEF1-221ENST00000600387 PI4KAP1Q8N8J0 262 aa22.04■■□□□ 1.12
ARHGEF1-221ENST00000600387 KDM3BQ7LBC6 1761 aa22.04■■□□□ 1.12
ARHGEF1-221ENST00000600387 HDAC5Q9UQL6 1122 aa22.04■■□□□ 1.12
ARHGEF1-221ENST00000600387 TMEM2Q9UHN6 1383 aa22.03■■□□□ 1.12
ARHGEF1-221ENST00000600387 UBR1Q8IWV7 1749 aa22.03■■□□□ 1.12
ARHGEF1-221ENST00000600387 NEMFO60524 1076 aa22.03■■□□□ 1.12
ARHGEF1-221ENST00000600387 GIGYF1O75420 1035 aaPredicted RBP22.03■■□□□ 1.12
ARHGEF1-221ENST00000600387 EIF2S2P20042 333 aaKnown RBP22.03■■□□□ 1.12
ARHGEF1-221ENST00000600387 TAF3Q5VWG9 929 aa22.03■■□□□ 1.12
ARHGEF1-221ENST00000600387 DDX54Q8TDD1 881 aaKnown RBP22.03■■□□□ 1.12
ARHGEF1-221ENST00000600387 DIP2BQ9P265 1576 aa22.03■■□□□ 1.12
ARHGEF1-221ENST00000600387 DDX41Q9UJV9 622 aaKnown RBP22.03■■□□□ 1.12
ARHGEF1-221ENST00000600387 HOXC9P31274 260 aa22.02■■□□□ 1.12
ARHGEF1-221ENST00000600387 LARP1Q6PKG0 1096 aaKnown RBP22.02■■□□□ 1.12
ARHGEF1-221ENST00000600387 CACTINQ8WUQ7 758 aaKnown RBP22.02■■□□□ 1.12
ARHGEF1-221ENST00000600387 CHPF2Q9P2E5 772 aa22.02■■□□□ 1.12
ARHGEF1-221ENST00000600387 TFIP11Q9UBB9 837 aaKnown RBP22.02■■□□□ 1.12
ARHGEF1-221ENST00000600387 RPS6KB1P23443 525 aa22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 SARM1Q6SZW1 724 aa22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 BICD2Q8TD16 824 aa22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 DNAJC25Q9H1X3 360 aa22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 RGPD8O14715 1765 aaPredicted RBP22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 NR1I2O75469 434 aa22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 EIF4A1P60842 406 aaKnown RBP22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 NMIQ13287 307 aaPredicted RBP22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 MLECQ14165 292 aa22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 CEP135Q66GS9 1140 aa22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 CEMIPQ8WUJ3 1361 aa22.01■■□□□ 1.11
ARHGEF1-221ENST00000600387 MED1Q15648 1581 aaPredicted RBP22■■□□□ 1.11
ARHGEF1-221ENST00000600387 MORC2Q9Y6X9 1032 aaPredicted RBP22■■□□□ 1.11
ARHGEF1-221ENST00000600387 ADCY9O60503 1353 aa22■■□□□ 1.11
ARHGEF1-221ENST00000600387 AACSQ86V21 672 aa22■■□□□ 1.11
ARHGEF1-221ENST00000600387 NGDNQ8NEJ9 315 aaKnown RBP22■■□□□ 1.11
ARHGEF1-221ENST00000600387 FAM227BQ96M60 508 aa22■■□□□ 1.11
ARHGEF1-221ENST00000600387 HMG20BQ9P0W2 317 aa22■■□□□ 1.11
ARHGEF1-221ENST00000600387 MYH15Q9Y2K3 1946 aa21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 NPHP4O75161 1426 aaPredicted RBP21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 GOLGA6L19H0YKK7 550 aa21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 TOB2Q14106 344 aaPredicted RBP21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 MRFAP1L1Q96HT8 127 aa21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 PODXL2Q9NZ53 605 aa21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 ALDH1L1O75891 902 aa21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 RBM6P78332 1123 aaKnown RBP21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 TSGA10IPQ3SY00 556 aa21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 LRRC8AQ8IWT6 810 aa21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 PGBD1Q96JS3 809 aa21.99■■□□□ 1.11
ARHGEF1-221ENST00000600387 CCDC144BQ3MJ40 725 aa21.98■■□□□ 1.11
ARHGEF1-221ENST00000600387 ZNF771Q7L3S4 317 aaPredicted RBP21.98■■□□□ 1.11
ARHGEF1-221ENST00000600387 CCDC144CPQ8IYA2 1237 aa21.98■■□□□ 1.11
ARHGEF1-221ENST00000600387 USP54Q70EL1 1684 aa21.98■■□□□ 1.11
ARHGEF1-221ENST00000600387 C9orf78Q9NZ63 289 aaPredicted RBP21.97■■□□□ 1.11
ARHGEF1-221ENST00000600387 CFAP45Q9UL16 551 aa21.97■■□□□ 1.11
ARHGEF1-221ENST00000600387 MARF1Q9Y4F3 1742 aaKnown RBP21.97■■□□□ 1.11
ARHGEF1-221ENST00000600387 ESF1Q9H501 851 aaKnown RBP21.97■■□□□ 1.11
ARHGEF1-221ENST00000600387 PLEKHG1Q9ULL1 1385 aa21.97■■□□□ 1.11
ARHGEF1-221ENST00000600387 CTAGE5O15320 804 aa21.96■■□□□ 1.11
ARHGEF1-221ENST00000600387 NLRP6P59044 892 aa21.96■■□□□ 1.11
ARHGEF1-221ENST00000600387 IQCB1Q15051 598 aa21.96■■□□□ 1.11
ARHGEF1-221ENST00000600387 KIF18AQ8NI77 898 aa21.96■■□□□ 1.11
ARHGEF1-221ENST00000600387 ZSCAN16Q9H4T2 348 aaPredicted RBP21.96■■□□□ 1.11
ARHGEF1-221ENST00000600387 TNRQ92752 1358 aa21.96■■□□□ 1.11
ARHGEF1-221ENST00000600387 JCADQ9P266 1359 aa21.96■■□□□ 1.11
ARHGEF1-221ENST00000600387 MED23Q9ULK4 1368 aa21.96■■□□□ 1.11
ARHGEF1-221ENST00000600387 DIP2AQ14689 1571 aa21.95■■□□□ 1.11
ARHGEF1-221ENST00000600387 RESTQ13127 1097 aa21.95■■□□□ 1.1
ARHGEF1-221ENST00000600387 ZNF397Q8NF99 534 aaPredicted RBP21.95■■□□□ 1.1
ARHGEF1-221ENST00000600387 PA2G4Q9UQ80 394 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms