RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 CCDC194A0A1B0GVG4 234 aa16.78■□□□□ 0.28
SYMPK-215ENST00000600237 CETN2P41208 172 aa16.78■□□□□ 0.28
SYMPK-215ENST00000600237 KANK3Q6NY19 840 aa16.78■□□□□ 0.28
SYMPK-215ENST00000600237 SHANK2Q9UPX8 1470 aa16.78■□□□□ 0.28
SYMPK-215ENST00000600237 RANBP6O60518 1105 aaKnown RBP16.78■□□□□ 0.28
SYMPK-215ENST00000600237 PDE1AP54750 535 aa16.78■□□□□ 0.28
SYMPK-215ENST00000600237 ZCRB1Q8TBF4 217 aaKnown RBP16.77■□□□□ 0.28
SYMPK-215ENST00000600237 RPGRQ92834 1020 aaKnown RBP16.77■□□□□ 0.28
SYMPK-215ENST00000600237 POTEB2H3BUK9 544 aa16.77■□□□□ 0.28
SYMPK-215ENST00000600237 GOLIM4O00461 696 aa16.77■□□□□ 0.28
SYMPK-215ENST00000600237 PAFAH1B1P43034 410 aa16.77■□□□□ 0.28
SYMPK-215ENST00000600237 TMEM266Q2M3C6 531 aa16.77■□□□□ 0.28
SYMPK-215ENST00000600237 CATIPQ7Z7H3 387 aa16.77■□□□□ 0.28
SYMPK-215ENST00000600237 FAM83GA6ND36 823 aa16.77■□□□□ 0.27
SYMPK-215ENST00000600237 KIF21AQ7Z4S6 1674 aa16.77■□□□□ 0.27
SYMPK-215ENST00000600237 DYNC1I1O14576 645 aa16.76■□□□□ 0.27
SYMPK-215ENST00000600237 GPTP24298 496 aa16.76■□□□□ 0.27
SYMPK-215ENST00000600237 DZIP1Q86YF9 867 aaKnown RBP16.76■□□□□ 0.27
SYMPK-215ENST00000600237 CCDC150Q8NCX0 1101 aa16.76■□□□□ 0.27
SYMPK-215ENST00000600237 FBXO3Q9UK99 471 aa16.76■□□□□ 0.27
SYMPK-215ENST00000600237 DESP17661 470 aa16.76■□□□□ 0.27
SYMPK-215ENST00000600237 CCDC102BQ68D86 513 aa16.76■□□□□ 0.27
SYMPK-215ENST00000600237 NCOA7Q8NI08 942 aa16.76■□□□□ 0.27
SYMPK-215ENST00000600237 MEIS3Q99687 375 aa16.76■□□□□ 0.27
SYMPK-215ENST00000600237 CWC25Q9NXE8 425 aaPredicted RBP16.76■□□□□ 0.27
SYMPK-215ENST00000600237 ZNF444Q8N0Y2 327 aaPredicted RBP16.76■□□□□ 0.27
SYMPK-215ENST00000600237 SHTN1A0MZ66 631 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 POTEJP0CG39 1038 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 CCDC82Q8N4S0 544 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 FBLN1P23142 703 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 TMC6Q7Z403 805 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
SYMPK-215ENST00000600237 LARP6Q9BRS8 491 aaKnown RBP16.75■□□□□ 0.27
SYMPK-215ENST00000600237 ESYT1Q9BSJ8 1104 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 TRMT1Q9NXH9 659 aaKnown RBP16.75■□□□□ 0.27
SYMPK-215ENST00000600237 ERICH4A6NGS2 130 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 HCLS1P14317 486 aaPredicted RBP16.75■□□□□ 0.27
SYMPK-215ENST00000600237 NLRP5P59047 1200 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 C8orf34Q49A92 452 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 TBX22Q9Y458 520 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 EZRP15311 586 aaKnown RBP16.75■□□□□ 0.27
SYMPK-215ENST00000600237 UBE3BQ7Z3V4 1068 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 PAXBP1Q9Y5B6 917 aa16.75■□□□□ 0.27
SYMPK-215ENST00000600237 LDHAL6AQ6ZMR3 332 aa16.74■□□□□ 0.27
SYMPK-215ENST00000600237 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
SYMPK-215ENST00000600237 CLCN1P35523 988 aa16.74■□□□□ 0.27
SYMPK-215ENST00000600237 ZFYP08048 801 aaPredicted RBP16.74■□□□□ 0.27
SYMPK-215ENST00000600237 CCDC12Q8WUD4 166 aaPredicted RBP16.74■□□□□ 0.27
SYMPK-215ENST00000600237 ALDH1L1O75891 902 aa16.74■□□□□ 0.27
SYMPK-215ENST00000600237 SNW1Q13573 536 aaKnown RBP16.74■□□□□ 0.27
SYMPK-215ENST00000600237 TNIP1Q15025 636 aa16.74■□□□□ 0.27
SYMPK-215ENST00000600237 TMEM67Q5HYA8 995 aa16.74■□□□□ 0.27
SYMPK-215ENST00000600237 CDC5LQ99459 802 aaKnown RBP16.74■□□□□ 0.27
SYMPK-215ENST00000600237 KIF5BP33176 963 aa16.73■□□□□ 0.27
SYMPK-215ENST00000600237 CBX1P83916 185 aa16.73■□□□□ 0.27
SYMPK-215ENST00000600237 HSPA2P54652 639 aa16.73■□□□□ 0.27
SYMPK-215ENST00000600237 TSHZ3Q63HK5 1081 aa16.73■□□□□ 0.27
SYMPK-215ENST00000600237 MRPL50Q8N5N7 158 aaKnown RBP16.73■□□□□ 0.27
SYMPK-215ENST00000600237 METAP2P50579 478 aaKnown RBP eCLIP16.73■□□□□ 0.274e-7■■■□□ 15.1
SYMPK-215ENST00000600237 LUZP1Q86V48 1076 aa16.73■□□□□ 0.27
SYMPK-215ENST00000600237 BIN1O00499 593 aa16.73■□□□□ 0.27
SYMPK-215ENST00000600237 AMPD3Q01432 767 aa16.73■□□□□ 0.27
SYMPK-215ENST00000600237 SLF2Q8IX21 1173 aa16.73■□□□□ 0.27
SYMPK-215ENST00000600237 TCP11L1Q9NUJ3 509 aa16.73■□□□□ 0.27
SYMPK-215ENST00000600237 ANKRD62A6NC57 917 aa16.72■□□□□ 0.27
SYMPK-215ENST00000600237 ATP8B2P98198 1209 aa16.72■□□□□ 0.27
SYMPK-215ENST00000600237 FAM200AQ8TCP9 573 aa16.72■□□□□ 0.27
SYMPK-215ENST00000600237 CCDC171Q6TFL3 1326 aa16.72■□□□□ 0.27
SYMPK-215ENST00000600237 NCKAP5LQ9HCH0 1330 aa16.72■□□□□ 0.27
SYMPK-215ENST00000600237 PAF1Q8N7H5 531 aa16.72■□□□□ 0.27
SYMPK-215ENST00000600237 BRF1Q92994 677 aa16.72■□□□□ 0.27
SYMPK-215ENST00000600237 GBP2P32456 591 aaPredicted RBP16.72■□□□□ 0.27
SYMPK-215ENST00000600237 AKAP4Q5JQC9 854 aa16.72■□□□□ 0.27
SYMPK-215ENST00000600237 CALCOCO1Q9P1Z2 691 aa16.72■□□□□ 0.27
SYMPK-215ENST00000600237 CRACR2BQ8N4Y2 399 aaPredicted RBP16.71■□□□□ 0.27
SYMPK-215ENST00000600237 KCNG4Q8TDN1 519 aa16.71■□□□□ 0.27
SYMPK-215ENST00000600237 PIK3C2GO75747 1445 aa16.71■□□□□ 0.27
SYMPK-215ENST00000600237 ATP5J2-PTCD1G3V325 749 aa16.71■□□□□ 0.27
SYMPK-215ENST00000600237 BMP15O95972 392 aa16.71■□□□□ 0.27
SYMPK-215ENST00000600237 KCNA6P17658 529 aa16.71■□□□□ 0.27
SYMPK-215ENST00000600237 ANKRD13DQ6ZTN6 518 aa16.71■□□□□ 0.27
SYMPK-215ENST00000600237 MICU3Q86XE3 530 aa16.71■□□□□ 0.27
SYMPK-215ENST00000600237 UQCRFS1P1P0C7P4 283 aa16.71■□□□□ 0.27
SYMPK-215ENST00000600237 XRCC6P12956 609 aaKnown RBP eCLIP16.71■□□□□ 0.272e-6■□□□□ 8.3
SYMPK-215ENST00000600237 RFC4P35249 363 aa16.71■□□□□ 0.27
SYMPK-215ENST00000600237 CPLX3Q8WVH0 158 aa16.71■□□□□ 0.27
SYMPK-215ENST00000600237 DISP1Q96F81 1524 aa16.71■□□□□ 0.26
SYMPK-215ENST00000600237 FLT4P35916 1363 aa16.7■□□□□ 0.26
SYMPK-215ENST00000600237 GIMAP6Q6P9H5 292 aa16.7■□□□□ 0.26
SYMPK-215ENST00000600237 MFSD6Q6ZSS7 791 aa16.7■□□□□ 0.26
SYMPK-215ENST00000600237 FAM114A1Q8IWE2 563 aa16.7■□□□□ 0.26
SYMPK-215ENST00000600237 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
SYMPK-215ENST00000600237 MPHOSPH10O00566 681 aaKnown RBP16.7■□□□□ 0.26
SYMPK-215ENST00000600237 UBA7P41226 1012 aa16.7■□□□□ 0.26
SYMPK-215ENST00000600237 MTIF2P46199 727 aaKnown RBP16.7■□□□□ 0.26
SYMPK-215ENST00000600237 EIF4A2Q14240 407 aaKnown RBP16.7■□□□□ 0.26
SYMPK-215ENST00000600237 TDRD12Q587J7 1177 aaKnown RBP16.7■□□□□ 0.26
SYMPK-215ENST00000600237 DDX46Q7L014 1031 aaKnown RBP16.7■□□□□ 0.26
SYMPK-215ENST00000600237 SMARCC1Q92922 1105 aaPredicted RBP16.7■□□□□ 0.26
SYMPK-215ENST00000600237 NAA15Q9BXJ9 866 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms