RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PLBD2Q8NHP8 589 aa24.07■■□□□ 1.44
CCDC9-205ENST00000600117 NUP98P52948 1817 aa24.07■■□□□ 1.44
CCDC9-205ENST00000600117 GLTPD2A6NH11 291 aa24.06■■□□□ 1.44
CCDC9-205ENST00000600117 BCAR3O75815 825 aa24.06■■□□□ 1.44
CCDC9-205ENST00000600117 RASSF7Q02833 373 aa24.06■■□□□ 1.44
CCDC9-205ENST00000600117 ANKRD13DQ6ZTN6 518 aa24.06■■□□□ 1.44
CCDC9-205ENST00000600117 CCDC88AQ3V6T2 1871 aa24.06■■□□□ 1.44
CCDC9-205ENST00000600117 LMNB1P20700 586 aa24.05■■□□□ 1.44
CCDC9-205ENST00000600117 CLEC4GQ6UXB4 293 aa24.05■■□□□ 1.44
CCDC9-205ENST00000600117 GIGYF2Q6Y7W6 1299 aaKnown RBP24.05■■□□□ 1.44
CCDC9-205ENST00000600117 RCAN3Q9UKA8 241 aa24.04■■□□□ 1.44
CCDC9-205ENST00000600117 AFDNP55196 1824 aaKnown RBP24.04■■□□□ 1.44
CCDC9-205ENST00000600117 DLEC1Q9Y238 1755 aa24.03■■□□□ 1.44
CCDC9-205ENST00000600117 DDX58O95786 925 aaKnown RBP24.03■■□□□ 1.44
CCDC9-205ENST00000600117 KSR2Q6VAB6 950 aa24.03■■□□□ 1.44
CCDC9-205ENST00000600117 ZNF652Q9Y2D9 606 aa24.03■■□□□ 1.44
CCDC9-205ENST00000600117 TIAM2Q8IVF5 1701 aa24.03■■□□□ 1.44
CCDC9-205ENST00000600117 ANKRD36CQ5JPF3 1778 aa24.02■■□□□ 1.44
CCDC9-205ENST00000600117 PI4KAP2A4QPH2 592 aa24.02■■□□□ 1.44
CCDC9-205ENST00000600117 FKBP5Q13451 457 aaPredicted RBP24.02■■□□□ 1.44
CCDC9-205ENST00000600117 TBC1D9BQ66K14 1250 aa24.02■■□□□ 1.44
CCDC9-205ENST00000600117 PI4KAP1Q8N8J0 262 aa24.02■■□□□ 1.44
CCDC9-205ENST00000600117 PTPRCP08575 1304 aa24.02■■□□□ 1.44
CCDC9-205ENST00000600117 NFIXQ14938 502 aa24.01■■□□□ 1.43
CCDC9-205ENST00000600117 RIC3Q7Z5B4 369 aa24.01■■□□□ 1.43
CCDC9-205ENST00000600117 NOB1Q9ULX3 412 aaKnown RBP24.01■■□□□ 1.43
CCDC9-205ENST00000600117 MAP3K2Q9Y2U5 619 aa24.01■■□□□ 1.43
CCDC9-205ENST00000600117 KIF16BQ96L93 1317 aa24.01■■□□□ 1.43
CCDC9-205ENST00000600117 NRXN2Q9P2S2 1712 aa24.01■■□□□ 1.43
CCDC9-205ENST00000600117 TCIRG1Q13488 830 aa23.99■■□□□ 1.43
CCDC9-205ENST00000600117 ZNF34Q8IZ26 560 aa23.99■■□□□ 1.43
CCDC9-205ENST00000600117 METTL22Q9BUU2 404 aaPredicted RBP23.99■■□□□ 1.43
CCDC9-205ENST00000600117 F6X3S4 739 aa23.98■■□□□ 1.43
CCDC9-205ENST00000600117 DNAAF4Q8WXU2 420 aa23.98■■□□□ 1.43
CCDC9-205ENST00000600117 HSP90AB3PQ58FF7 597 aa23.97■■□□□ 1.43
CCDC9-205ENST00000600117 BICDL1Q6ZP65 573 aa23.97■■□□□ 1.43
CCDC9-205ENST00000600117 UBN2Q6ZU65 1347 aa23.97■■□□□ 1.43
CCDC9-205ENST00000600117 TTLL6Q8N841 843 aa23.97■■□□□ 1.43
CCDC9-205ENST00000600117 ISCA1Q9BUE6 129 aa23.97■■□□□ 1.43
CCDC9-205ENST00000600117 NIP7Q9Y221 180 aaKnown RBP eCLIP23.97■■□□□ 1.43
CCDC9-205ENST00000600117 GPTP24298 496 aa23.96■■□□□ 1.43
CCDC9-205ENST00000600117 ARHGAP45Q92619 1136 aa23.96■■□□□ 1.43
CCDC9-205ENST00000600117 POTECB2RU33 542 aa23.95■■□□□ 1.42
CCDC9-205ENST00000600117 MYD88Q99836 296 aa23.95■■□□□ 1.42
CCDC9-205ENST00000600117 DICER1Q9UPY3 1922 aaKnown RBP23.94■■□□□ 1.42
CCDC9-205ENST00000600117 CARMIL3Q8ND23 1372 aa23.94■■□□□ 1.42
CCDC9-205ENST00000600117 ATP5J2-PTCD1G3V325 749 aa23.94■■□□□ 1.42
CCDC9-205ENST00000600117 NFKBIEO00221 500 aa23.94■■□□□ 1.42
CCDC9-205ENST00000600117 IGKV5-2P06315 115 aa23.94■■□□□ 1.42
CCDC9-205ENST00000600117 TRIM28Q13263 835 aaKnown RBP23.94■■□□□ 1.42
CCDC9-205ENST00000600117 FRAT1Q92837 279 aaPredicted RBP23.94■■□□□ 1.42
CCDC9-205ENST00000600117 SETDB2Q96T68 719 aa23.94■■□□□ 1.42
CCDC9-205ENST00000600117 API5Q9BZZ5 524 aaKnown RBP23.94■■□□□ 1.42
CCDC9-205ENST00000600117 NLRP10Q86W26 655 aa23.93■■□□□ 1.42
CCDC9-205ENST00000600117 TNNQ9UQP3 1299 aa23.93■■□□□ 1.42
CCDC9-205ENST00000600117 IPO8O15397 1037 aaKnown RBP23.92■■□□□ 1.42
CCDC9-205ENST00000600117 SERPINB2P05120 415 aa23.92■■□□□ 1.42
CCDC9-205ENST00000600117 TRIM27P14373 513 aa23.92■■□□□ 1.42
CCDC9-205ENST00000600117 PARP10Q53GL7 1025 aa23.92■■□□□ 1.42
CCDC9-205ENST00000600117 BEND3Q5T5X7 828 aa23.92■■□□□ 1.42
CCDC9-205ENST00000600117 ZKSCAN2Q63HK3 967 aa23.92■■□□□ 1.42
CCDC9-205ENST00000600117 DPY19L2Q6NUT2 758 aa23.92■■□□□ 1.42
CCDC9-205ENST00000600117 ATF7IPQ6VMQ6 1270 aa23.92■■□□□ 1.42
CCDC9-205ENST00000600117 C2CD5Q86YS7 1000 aa23.92■■□□□ 1.42
CCDC9-205ENST00000600117 IBTKQ9P2D0 1353 aaPredicted RBP23.91■■□□□ 1.42
CCDC9-205ENST00000600117 H0YIN7 160 aa23.91■■□□□ 1.42
CCDC9-205ENST00000600117 SUSD4Q5VX71 490 aa23.91■■□□□ 1.42
CCDC9-205ENST00000600117 LINS1Q8NG48 757 aa23.91■■□□□ 1.42
CCDC9-205ENST00000600117 CREBZFQ9NS37 354 aa23.91■■□□□ 1.42
CCDC9-205ENST00000600117 ABCC4O15439 1325 aa23.9■■□□□ 1.42
CCDC9-205ENST00000600117 NEXNQ0ZGT2 675 aa23.9■■□□□ 1.42
CCDC9-205ENST00000600117 CWF19L2Q2TBE0 894 aaKnown RBP23.9■■□□□ 1.42
CCDC9-205ENST00000600117 NEURL1BA8MQ27 555 aa23.89■■□□□ 1.41
CCDC9-205ENST00000600117 NTSR2O95665 410 aa23.89■■□□□ 1.41
CCDC9-205ENST00000600117 SLC4A10Q6U841 1118 aa23.89■■□□□ 1.41
CCDC9-205ENST00000600117 CCDC191Q8NCU4 936 aa23.89■■□□□ 1.41
CCDC9-205ENST00000600117 FER1L6Q2WGJ9 1857 aa23.88■■□□□ 1.41
CCDC9-205ENST00000600117 FAM177BA6PVY3 158 aa23.87■■□□□ 1.41
CCDC9-205ENST00000600117 PRR5LQ6MZQ0 368 aa23.87■■□□□ 1.41
CCDC9-205ENST00000600117 CHADLQ6NUI6 762 aa23.87■■□□□ 1.41
CCDC9-205ENST00000600117 NBPF5PQ86XG9 351 aaPredicted RBP23.87■■□□□ 1.41
CCDC9-205ENST00000600117 CWC25Q9NXE8 425 aaPredicted RBP23.87■■□□□ 1.41
CCDC9-205ENST00000600117 MKRN1Q9UHC7 482 aaKnown RBP23.87■■□□□ 1.41
CCDC9-205ENST00000600117 PLIN1O60240 522 aa23.86■■□□□ 1.41
CCDC9-205ENST00000600117 ALDH1L1O75891 902 aa23.86■■□□□ 1.41
CCDC9-205ENST00000600117 PPP1R42Q7Z4L9 355 aa23.86■■□□□ 1.41
CCDC9-205ENST00000600117 UTP14AQ9BVJ6 771 aaKnown RBP23.86■■□□□ 1.41
CCDC9-205ENST00000600117 SRCIN1Q9C0H9 1055 aa23.86■■□□□ 1.41
CCDC9-205ENST00000600117 ANKRD31Q8N7Z5 1873 aa23.85■■□□□ 1.41
CCDC9-205ENST00000600117 GCKRQ14397 625 aa23.85■■□□□ 1.41
CCDC9-205ENST00000600117 CLUAP1Q96AJ1 413 aa23.85■■□□□ 1.41
CCDC9-205ENST00000600117 NYXQ9GZU5 481 aa23.85■■□□□ 1.41
CCDC9-205ENST00000600117 ABCC12Q96J65 1359 aa23.84■■□□□ 1.41
CCDC9-205ENST00000600117 RLBP1P12271 317 aa23.84■■□□□ 1.41
CCDC9-205ENST00000600117 ERFEQ4G0M1 354 aa23.84■■□□□ 1.41
CCDC9-205ENST00000600117 TPTE2Q6XPS3 522 aa23.84■■□□□ 1.41
CCDC9-205ENST00000600117 NUTM1Q86Y26 1132 aa23.84■■□□□ 1.41
CCDC9-205ENST00000600117 CNBD1Q8NA66 436 aa23.84■■□□□ 1.41
CCDC9-205ENST00000600117 PRDM10Q9NQV6 1147 aa23.84■■□□□ 1.41
CCDC9-205ENST00000600117 TRMT112Q9UI30 125 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms