RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 NTSR2O95665 410 aa24.46■■□□□ 1.51
PNKP-213ENST00000599543 NECTIN2Q92692 538 aa24.46■■□□□ 1.51
PNKP-213ENST00000599543 ADAMTS8Q9UP79 889 aa24.46■■□□□ 1.51
PNKP-213ENST00000599543 CHL1O00533 1208 aa24.45■■□□□ 1.5
PNKP-213ENST00000599543 TRIM35Q9UPQ4 493 aa24.45■■□□□ 1.5
PNKP-213ENST00000599543 KLRG1Q96E93 195 aa24.44■■□□□ 1.5
PNKP-213ENST00000599543 AIMP1Q12904 312 aaKnown RBP24.43■■□□□ 1.5
PNKP-213ENST00000599543 RBM17Q96I25 401 aaKnown RBP24.43■■□□□ 1.5
PNKP-213ENST00000599543 IQCA1LA6NCM1 817 aa24.42■■□□□ 1.5
PNKP-213ENST00000599543 HOXA10P31260 410 aaPredicted RBP24.42■■□□□ 1.5
PNKP-213ENST00000599543 IARSP41252 1262 aaKnown RBP24.42■■□□□ 1.5
PNKP-213ENST00000599543 KRT24Q2M2I5 525 aa24.42■■□□□ 1.5
PNKP-213ENST00000599543 HSP90AB3PQ58FF7 597 aa24.42■■□□□ 1.5
PNKP-213ENST00000599543 CC2D2BQ6DHV5 1058 aa24.42■■□□□ 1.5
PNKP-213ENST00000599543 COPS6Q7L5N1 327 aa24.42■■□□□ 1.5
PNKP-213ENST00000599543 SYNE4Q8N205 404 aa24.42■■□□□ 1.5
PNKP-213ENST00000599543 UTP14AQ9BVJ6 771 aaKnown RBP24.42■■□□□ 1.5
PNKP-213ENST00000599543 SNED1Q8TER0 1413 aa24.42■■□□□ 1.5
PNKP-213ENST00000599543 XAGE3Q8WTP9 111 aa24.41■■□□□ 1.5
PNKP-213ENST00000599543 PSMD1Q99460 953 aa24.41■■□□□ 1.5
PNKP-213ENST00000599543 DDX21Q9NR30 783 aaKnown RBP eCLIP24.41■■□□□ 1.5
PNKP-213ENST00000599543 LAMB2P55268 1798 aa24.41■■□□□ 1.5
PNKP-213ENST00000599543 RNF123Q5XPI4 1314 aa24.4■■□□□ 1.5
PNKP-213ENST00000599543 ZNF541Q9H0D2 1346 aa24.4■■□□□ 1.5
PNKP-213ENST00000599543 L3MBTL3Q96JM7 780 aaPredicted RBP24.4■■□□□ 1.5
PNKP-213ENST00000599543 NLRP3Q96P20 1036 aa24.4■■□□□ 1.5
PNKP-213ENST00000599543 CRAMP1Q96RY5 1269 aa24.4■■□□□ 1.5
PNKP-213ENST00000599543 PPEF1O14829 653 aaPredicted RBP24.39■■□□□ 1.49
PNKP-213ENST00000599543 HDGFL1Q5TGJ6 251 aa24.39■■□□□ 1.49
PNKP-213ENST00000599543 CHPF2Q9P2E5 772 aa24.39■■□□□ 1.49
PNKP-213ENST00000599543 HOXB7P09629 217 aa24.38■■□□□ 1.49
PNKP-213ENST00000599543 GRIPAP1Q4V328 841 aa24.38■■□□□ 1.49
PNKP-213ENST00000599543 CHADLQ6NUI6 762 aa24.38■■□□□ 1.49
PNKP-213ENST00000599543 C3orf67Q6ZVT6 689 aa24.38■■□□□ 1.49
PNKP-213ENST00000599543 JDP2Q8WYK2 163 aa24.38■■□□□ 1.49
PNKP-213ENST00000599543 CFAP44Q96MT7 982 aa24.37■■□□□ 1.49
PNKP-213ENST00000599543 TMX4Q9H1E5 349 aaPredicted RBP24.37■■□□□ 1.49
PNKP-213ENST00000599543 FZD9O00144 591 aa24.36■■□□□ 1.49
PNKP-213ENST00000599543 TCERG1O14776 1098 aaKnown RBP24.36■■□□□ 1.49
PNKP-213ENST00000599543 POTEIP0CG38 1075 aa24.36■■□□□ 1.49
PNKP-213ENST00000599543 POTEJP0CG39 1038 aa24.36■■□□□ 1.49
PNKP-213ENST00000599543 SLC10A5Q5PT55 438 aa24.36■■□□□ 1.49
PNKP-213ENST00000599543 NLRP10Q86W26 655 aa24.36■■□□□ 1.49
PNKP-213ENST00000599543 TCIRG1Q13488 830 aa24.35■■□□□ 1.49
PNKP-213ENST00000599543 CCDC184Q52MB2 194 aa24.35■■□□□ 1.49
PNKP-213ENST00000599543 JMYQ8N9B5 988 aa24.35■■□□□ 1.49
PNKP-213ENST00000599543 TAF1DQ9H5J8 278 aaPredicted RBP24.35■■□□□ 1.49
PNKP-213ENST00000599543 ANP32CO43423 234 aa24.34■■□□□ 1.49
PNKP-213ENST00000599543 IFFO2Q5TF58 517 aa24.34■■□□□ 1.49
PNKP-213ENST00000599543 LDHDQ86WU2 507 aa24.34■■□□□ 1.49
PNKP-213ENST00000599543 DBF4Q9UBU7 674 aaPredicted RBP24.34■■□□□ 1.49
PNKP-213ENST00000599543 TRMT112Q9UI30 125 aaKnown RBP24.34■■□□□ 1.49
PNKP-213ENST00000599543 HACL1Q9UJ83 578 aa24.34■■□□□ 1.49
PNKP-213ENST00000599543 GPC2Q8N158 579 aa24.33■■□□□ 1.49
PNKP-213ENST00000599543 MBIPQ9NS73 344 aa24.33■■□□□ 1.49
PNKP-213ENST00000599543 COL4A5P29400 1685 aa24.33■■□□□ 1.49
PNKP-213ENST00000599543 ABCC4O15439 1325 aa24.33■■□□□ 1.48
PNKP-213ENST00000599543 SH3TC1Q8TE82 1336 aa24.33■■□□□ 1.48
PNKP-213ENST00000599543 APAF1O14727 1248 aa24.32■■□□□ 1.48
PNKP-213ENST00000599543 CALD1Q05682 793 aaKnown RBP24.32■■□□□ 1.48
PNKP-213ENST00000599543 EAPPQ56P03 285 aaPredicted RBP24.32■■□□□ 1.48
PNKP-213ENST00000599543 DUSP27Q5VZP5 1158 aa24.32■■□□□ 1.48
PNKP-213ENST00000599543 LARGE2Q8N3Y3 721 aa24.32■■□□□ 1.48
PNKP-213ENST00000599543 PLBD2Q8NHP8 589 aa24.32■■□□□ 1.48
PNKP-213ENST00000599543 HCLS1P14317 486 aaPredicted RBP24.31■■□□□ 1.48
PNKP-213ENST00000599543 EIF6P56537 245 aaKnown RBP24.31■■□□□ 1.48
PNKP-213ENST00000599543 SLC51AQ86UW1 340 aa24.31■■□□□ 1.48
PNKP-213ENST00000599543 DDX60Q8IY21 1712 aaKnown RBP24.31■■□□□ 1.48
PNKP-213ENST00000599543 HYPKQ9NX55 129 aa24.31■■□□□ 1.48
PNKP-213ENST00000599543 ATP6V0A2Q9Y487 856 aa24.31■■□□□ 1.48
PNKP-213ENST00000599543 ADAMTSL1Q8N6G6 1762 aa24.3■■□□□ 1.48
PNKP-213ENST00000599543 EPHX2P34913 555 aa24.3■■□□□ 1.48
PNKP-213ENST00000599543 ANKRD13DQ6ZTN6 518 aa24.3■■□□□ 1.48
PNKP-213ENST00000599543 IFT57Q9NWB7 429 aa24.3■■□□□ 1.48
PNKP-213ENST00000599543 TAF1P21675 1872 aa24.3■■□□□ 1.48
PNKP-213ENST00000599543 CREBZFQ9NS37 354 aa24.29■■□□□ 1.48
PNKP-213ENST00000599543 GJA3Q9Y6H8 435 aa24.29■■□□□ 1.48
PNKP-213ENST00000599543 ZNF853P0CG23 659 aa24.28■■□□□ 1.48
PNKP-213ENST00000599543 GNAI1P63096 354 aa24.28■■□□□ 1.48
PNKP-213ENST00000599543 DDX46Q7L014 1031 aaKnown RBP24.28■■□□□ 1.48
PNKP-213ENST00000599543 PNMA8AQ86V59 439 aaPredicted RBP24.28■■□□□ 1.48
PNKP-213ENST00000599543 CLEC11AQ9Y240 323 aa24.28■■□□□ 1.48
PNKP-213ENST00000599543 PPIP5K2O43314 1243 aa24.27■■□□□ 1.48
PNKP-213ENST00000599543 BBOX1O75936 387 aa24.27■■□□□ 1.48
PNKP-213ENST00000599543 NIM1KQ8IY84 436 aa24.27■■□□□ 1.48
PNKP-213ENST00000599543 ZNF428Q96B54 188 aa24.27■■□□□ 1.48
PNKP-213ENST00000599543 LMOD1P29536 600 aaPredicted RBP24.26■■□□□ 1.47
PNKP-213ENST00000599543 SUPT20HQ8NEM7 779 aa24.26■■□□□ 1.47
PNKP-213ENST00000599543 AOC3Q16853 763 aa24.25■■□□□ 1.47
PNKP-213ENST00000599543 VPS33BQ9H267 617 aa24.25■■□□□ 1.47
PNKP-213ENST00000599543 PASKQ96RG2 1323 aa24.25■■□□□ 1.47
PNKP-213ENST00000599543 LTBP1Q14766 1721 aa24.24■■□□□ 1.47
PNKP-213ENST00000599543 ATP5J2-PTCD1G3V325 749 aa24.24■■□□□ 1.47
PNKP-213ENST00000599543 GRAPQ13588 217 aa24.24■■□□□ 1.47
PNKP-213ENST00000599543 DPP8Q6V1X1 898 aaPredicted RBP24.24■■□□□ 1.47
PNKP-213ENST00000599543 SP8Q8IXZ3 490 aa24.24■■□□□ 1.47
PNKP-213ENST00000599543 GRAPLQ8TC17 118 aaPredicted RBP24.24■■□□□ 1.47
PNKP-213ENST00000599543 ISCA1Q9BUE6 129 aa24.24■■□□□ 1.47
PNKP-213ENST00000599543 LRRC37AA6NMS7 1700 aa24.24■■□□□ 1.47
PNKP-213ENST00000599543 ELL2O00472 640 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 228.3 ms