RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 USP44Q9H0E7 712 aa24.27■■□□□ 1.48
LTBP4-223ENST00000598717 UBN2Q6ZU65 1347 aa24.27■■□□□ 1.48
LTBP4-223ENST00000598717 IBTKQ9P2D0 1353 aaPredicted RBP24.27■■□□□ 1.48
LTBP4-223ENST00000598717 NFIXQ14938 502 aa24.26■■□□□ 1.47
LTBP4-223ENST00000598717 MEIS3Q99687 375 aa24.26■■□□□ 1.47
LTBP4-223ENST00000598717 TRMT112Q9UI30 125 aaKnown RBP24.26■■□□□ 1.47
LTBP4-223ENST00000598717 ANKRD36CQ5JPF3 1778 aa24.26■■□□□ 1.47
LTBP4-223ENST00000598717 N4BP2Q86UW6 1770 aaPredicted RBP24.26■■□□□ 1.47
LTBP4-223ENST00000598717 FAM177BA6PVY3 158 aa24.25■■□□□ 1.47
LTBP4-223ENST00000598717 UBTFL1P0CB47 393 aaPredicted RBP24.25■■□□□ 1.47
LTBP4-223ENST00000598717 SUSD4Q5VX71 490 aa24.25■■□□□ 1.47
LTBP4-223ENST00000598717 SLC16A10Q8TF71 515 aa24.25■■□□□ 1.47
LTBP4-223ENST00000598717 UTP14AQ9BVJ6 771 aaKnown RBP24.25■■□□□ 1.47
LTBP4-223ENST00000598717 HDAC5Q9UQL6 1122 aa24.25■■□□□ 1.47
LTBP4-223ENST00000598717 AFDNP55196 1824 aaKnown RBP24.24■■□□□ 1.47
LTBP4-223ENST00000598717 AAMPQ13685 434 aa24.24■■□□□ 1.47
LTBP4-223ENST00000598717 H7C1W4 665 aa24.23■■□□□ 1.47
LTBP4-223ENST00000598717 PCCAP05165 728 aaPredicted RBP24.23■■□□□ 1.47
LTBP4-223ENST00000598717 NBPF7P0C2Y1 421 aaPredicted RBP24.23■■□□□ 1.47
LTBP4-223ENST00000598717 TM4SF1P30408 202 aa24.23■■□□□ 1.47
LTBP4-223ENST00000598717 MSL1Q68DK7 614 aa24.23■■□□□ 1.47
LTBP4-223ENST00000598717 UBE3BQ7Z3V4 1068 aa24.23■■□□□ 1.47
LTBP4-223ENST00000598717 NBPF5PQ86XG9 351 aaPredicted RBP24.23■■□□□ 1.47
LTBP4-223ENST00000598717 ZBTB38Q8NAP3 1195 aaPredicted RBP24.23■■□□□ 1.47
LTBP4-223ENST00000598717 NYXQ9GZU5 481 aa24.23■■□□□ 1.47
LTBP4-223ENST00000598717 ZBTB40Q9NUA8 1239 aa24.23■■□□□ 1.47
LTBP4-223ENST00000598717 CARMIL3Q8ND23 1372 aa24.23■■□□□ 1.47
LTBP4-223ENST00000598717 UTYO14607 1347 aa24.22■■□□□ 1.47
LTBP4-223ENST00000598717 NPHP1O15259 732 aa24.22■■□□□ 1.47
LTBP4-223ENST00000598717 GTF2E1P29083 439 aaPredicted RBP24.22■■□□□ 1.47
LTBP4-223ENST00000598717 RTL5Q5HYW3 569 aaPredicted RBP24.22■■□□□ 1.47
LTBP4-223ENST00000598717 PDGFDQ9GZP0 370 aaPredicted RBP24.22■■□□□ 1.47
LTBP4-223ENST00000598717 GNAI2P04899 355 aa24.21■■□□□ 1.47
LTBP4-223ENST00000598717 TPTE2Q6XPS3 522 aa24.21■■□□□ 1.47
LTBP4-223ENST00000598717 JARID2Q92833 1246 aaPredicted RBP24.21■■□□□ 1.47
LTBP4-223ENST00000598717 FAM89AQ96GI7 184 aa24.21■■□□□ 1.47
LTBP4-223ENST00000598717 SH3TC1Q8TE82 1336 aa24.2■■□□□ 1.46
LTBP4-223ENST00000598717 PSDA5PKW4 1024 aaPredicted RBP24.2■■□□□ 1.46
LTBP4-223ENST00000598717 ERICH6BQ5W0A0 696 aa24.2■■□□□ 1.46
LTBP4-223ENST00000598717 SOCS7O14512 581 aa24.19■■□□□ 1.46
LTBP4-223ENST00000598717 NTSR2O95665 410 aa24.19■■□□□ 1.46
LTBP4-223ENST00000598717 PARP3Q9Y6F1 533 aa24.19■■□□□ 1.46
LTBP4-223ENST00000598717 SERPINB2P05120 415 aa24.18■■□□□ 1.46
LTBP4-223ENST00000598717 MMP10P09238 476 aa24.18■■□□□ 1.46
LTBP4-223ENST00000598717 HSP90B1P14625 803 aaKnown RBP24.18■■□□□ 1.46
LTBP4-223ENST00000598717 C1orf115Q9H7X2 142 aa24.18■■□□□ 1.46
LTBP4-223ENST00000598717 LRRFIP2Q9Y608 721 aaKnown RBP24.18■■□□□ 1.46
LTBP4-223ENST00000598717 CDHR2Q9BYE9 1310 aa24.17■■□□□ 1.46
LTBP4-223ENST00000598717 POLRMTO00411 1230 aaKnown RBP24.17■■□□□ 1.46
LTBP4-223ENST00000598717 IRS4O14654 1257 aaPredicted RBP24.17■■□□□ 1.46
LTBP4-223ENST00000598717 CASP7P55210 303 aa24.17■■□□□ 1.46
LTBP4-223ENST00000598717 DDR1Q08345 913 aa24.17■■□□□ 1.46
LTBP4-223ENST00000598717 NUTM1Q86Y26 1132 aa24.17■■□□□ 1.46
LTBP4-223ENST00000598717 CNBD1Q8NA66 436 aa24.17■■□□□ 1.46
LTBP4-223ENST00000598717 SUCLG2Q96I99 432 aa24.16■■□□□ 1.46
LTBP4-223ENST00000598717 ZBTB7AO95365 584 aa24.15■■□□□ 1.46
LTBP4-223ENST00000598717 ERFEQ4G0M1 354 aa24.15■■□□□ 1.46
LTBP4-223ENST00000598717 SYNE4Q8N205 404 aa24.15■■□□□ 1.46
LTBP4-223ENST00000598717 MTFR1LQ9H019 292 aa24.15■■□□□ 1.46
LTBP4-223ENST00000598717 ST5P78524 1137 aa24.14■■□□□ 1.45
LTBP4-223ENST00000598717 COL24A1Q17RW2 1714 aa24.14■■□□□ 1.45
LTBP4-223ENST00000598717 PDE8AO60658 829 aa24.13■■□□□ 1.45
LTBP4-223ENST00000598717 PRR5LQ6MZQ0 368 aa24.13■■□□□ 1.45
LTBP4-223ENST00000598717 HCLS1P14317 486 aaPredicted RBP24.12■■□□□ 1.45
LTBP4-223ENST00000598717 PLA2G12BQ9BX93 195 aa24.12■■□□□ 1.45
LTBP4-223ENST00000598717 BICC1Q9H694 974 aaKnown RBP24.12■■□□□ 1.45
LTBP4-223ENST00000598717 CASZ1Q86V15 1759 aa24.11■■□□□ 1.45
LTBP4-223ENST00000598717 POLD1P28340 1107 aa24.11■■□□□ 1.45
LTBP4-223ENST00000598717 SLC10A5Q5PT55 438 aa24.11■■□□□ 1.45
LTBP4-223ENST00000598717 RPAP2Q8IXW5 612 aaPredicted RBP24.11■■□□□ 1.45
LTBP4-223ENST00000598717 KAZALD1Q96I82 304 aa24.11■■□□□ 1.45
LTBP4-223ENST00000598717 ATF5Q9Y2D1 282 aaPredicted RBP24.11■■□□□ 1.45
LTBP4-223ENST00000598717 EPHA10Q5JZY3 1008 aa24.1■■□□□ 1.45
LTBP4-223ENST00000598717 CCDC24Q8N4L8 307 aa24.1■■□□□ 1.45
LTBP4-223ENST00000598717 PCDHB15Q9Y5E8 787 aa24.1■■□□□ 1.45
LTBP4-223ENST00000598717 GTF3C3Q9Y5Q9 886 aa24.1■■□□□ 1.45
LTBP4-223ENST00000598717 FOXO4P98177 505 aa24.09■■□□□ 1.45
LTBP4-223ENST00000598717 CEP85Q6P2H3 762 aa24.09■■□□□ 1.45
LTBP4-223ENST00000598717 NLRP3Q96P20 1036 aa24.09■■□□□ 1.45
LTBP4-223ENST00000598717 ATP8B2P98198 1209 aa24.08■■□□□ 1.45
LTBP4-223ENST00000598717 LMBR1LQ6UX01 489 aa24.08■■□□□ 1.45
LTBP4-223ENST00000598717 ANKRD44Q8N8A2 993 aa24.08■■□□□ 1.45
LTBP4-223ENST00000598717 PPP4R2Q9NY27 417 aa24.08■■□□□ 1.45
LTBP4-223ENST00000598717 CHMP3Q9Y3E7 222 aa24.08■■□□□ 1.45
LTBP4-223ENST00000598717 ABCC12Q96J65 1359 aa24.07■■□□□ 1.44
LTBP4-223ENST00000598717 CTSWP56202 376 aa24.07■■□□□ 1.44
LTBP4-223ENST00000598717 RABL6Q3YEC7 729 aaPredicted RBP24.07■■□□□ 1.44
LTBP4-223ENST00000598717 SRGAP3O43295 1099 aa24.06■■□□□ 1.44
LTBP4-223ENST00000598717 HMMRO75330 724 aa24.06■■□□□ 1.44
LTBP4-223ENST00000598717 CSF1RP07333 972 aa24.05■■□□□ 1.44
LTBP4-223ENST00000598717 MTX1Q13505 466 aa24.05■■□□□ 1.44
LTBP4-223ENST00000598717 CCDC152Q4G0S7 254 aa24.05■■□□□ 1.44
LTBP4-223ENST00000598717 TTLL11Q8NHH1 800 aa24.05■■□□□ 1.44
LTBP4-223ENST00000598717 CCDC136Q96JN2 1154 aa24.04■■□□□ 1.44
LTBP4-223ENST00000598717 CCDC85AQ96PX6 553 aaPredicted RBP24.04■■□□□ 1.44
LTBP4-223ENST00000598717 BRIP1Q9BX63 1249 aa24.04■■□□□ 1.44
LTBP4-223ENST00000598717 RWDD1Q9H446 243 aaPredicted RBP24.04■■□□□ 1.44
LTBP4-223ENST00000598717 RIC1Q4ADV7 1423 aa24.03■■□□□ 1.44
LTBP4-223ENST00000598717 SF3B3Q15393 1217 aaKnown RBP24.03■■□□□ 1.44
LTBP4-223ENST00000598717 NRXN2Q9P2S2 1712 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms