RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 C3orf67Q6ZVT6 689 aa29.34■■■□□ 2.29
IRF3-220ENST00000598108 G2E3Q7L622 706 aa29.34■■■□□ 2.29
IRF3-220ENST00000598108 CNKSR1Q969H4 720 aa29.34■■■□□ 2.29
IRF3-220ENST00000598108 STK31Q9BXU1 1019 aa29.34■■■□□ 2.29
IRF3-220ENST00000598108 CRY2Q49AN0 593 aa29.33■■■□□ 2.29
IRF3-220ENST00000598108 SLC10A5Q5PT55 438 aa29.33■■■□□ 2.29
IRF3-220ENST00000598108 ZNF219Q9P2Y4 722 aaPredicted RBP29.33■■■□□ 2.29
IRF3-220ENST00000598108 CHD4Q14839 1912 aa29.32■■■□□ 2.28
IRF3-220ENST00000598108 C21orf2O43822 256 aa29.32■■■□□ 2.28
IRF3-220ENST00000598108 PRPF40BQ6NWY9 871 aaKnown RBP29.32■■■□□ 2.28
IRF3-220ENST00000598108 TRMT112Q9UI30 125 aaKnown RBP29.32■■■□□ 2.28
IRF3-220ENST00000598108 COL11A2P13942 1736 aaPredicted RBP29.31■■■□□ 2.28
IRF3-220ENST00000598108 TRIM28Q13263 835 aaKnown RBP29.3■■■□□ 2.28
IRF3-220ENST00000598108 HCLS1P14317 486 aaPredicted RBP29.29■■■□□ 2.28
IRF3-220ENST00000598108 CDCA7LQ96GN5 454 aa29.29■■■□□ 2.28
IRF3-220ENST00000598108 DLEC1Q9Y238 1755 aa29.29■■■□□ 2.28
IRF3-220ENST00000598108 DDX58O95786 925 aaKnown RBP29.28■■■□□ 2.28
IRF3-220ENST00000598108 RASSF7Q02833 373 aa29.28■■■□□ 2.28
IRF3-220ENST00000598108 SLFN5Q08AF3 891 aa29.28■■■□□ 2.28
IRF3-220ENST00000598108 C7orf43Q8WVR3 580 aa29.28■■■□□ 2.28
IRF3-220ENST00000598108 MYD88Q99836 296 aa29.28■■■□□ 2.28
IRF3-220ENST00000598108 MAP3K2Q9Y2U5 619 aa29.28■■■□□ 2.28
IRF3-220ENST00000598108 RIC1Q4ADV7 1423 aa29.28■■■□□ 2.28
IRF3-220ENST00000598108 PI4KAP2A4QPH2 592 aa29.27■■■□□ 2.28
IRF3-220ENST00000598108 KSR2Q6VAB6 950 aa29.27■■■□□ 2.28
IRF3-220ENST00000598108 PI4KAP1Q8N8J0 262 aa29.27■■■□□ 2.28
IRF3-220ENST00000598108 METTL22Q9BUU2 404 aaPredicted RBP29.27■■■□□ 2.28
IRF3-220ENST00000598108 ARFGEF1Q9Y6D6 1849 aa29.27■■■□□ 2.28
IRF3-220ENST00000598108 RNF123Q5XPI4 1314 aa29.26■■■□□ 2.27
IRF3-220ENST00000598108 SH3TC1Q8TE82 1336 aa29.26■■■□□ 2.27
IRF3-220ENST00000598108 E9PSI1 815 aa29.26■■■□□ 2.27
IRF3-220ENST00000598108 PRELPP51888 382 aa29.26■■■□□ 2.27
IRF3-220ENST00000598108 C9orf131Q5VYM1 1079 aa29.26■■■□□ 2.27
IRF3-220ENST00000598108 FAM89AQ96GI7 184 aa29.26■■■□□ 2.27
IRF3-220ENST00000598108 NLRP3Q96P20 1036 aa29.26■■■□□ 2.27
IRF3-220ENST00000598108 ADCY9O60503 1353 aa29.26■■■□□ 2.27
IRF3-220ENST00000598108 TNRC6CQ9HCJ0 1690 aaKnown RBP29.25■■■□□ 2.27
IRF3-220ENST00000598108 NFKBIEO00221 500 aa29.25■■■□□ 2.27
IRF3-220ENST00000598108 HOXA10P31260 410 aaPredicted RBP29.25■■■□□ 2.27
IRF3-220ENST00000598108 FLIIQ13045 1269 aa29.24■■■□□ 2.27
IRF3-220ENST00000598108 ALDH1B1P30837 517 aa29.23■■■□□ 2.27
IRF3-220ENST00000598108 RTL5Q5HYW3 569 aaPredicted RBP29.23■■■□□ 2.27
IRF3-220ENST00000598108 OLFM4Q6UX06 510 aa29.23■■■□□ 2.27
IRF3-220ENST00000598108 RPGRQ92834 1020 aaKnown RBP29.23■■■□□ 2.27
IRF3-220ENST00000598108 SLX4Q8IY92 1834 aa29.22■■■□□ 2.27
IRF3-220ENST00000598108 IGKV5-2P06315 115 aa29.21■■■□□ 2.27
IRF3-220ENST00000598108 TRMT2AQ8IZ69 625 aaKnown RBP29.21■■■□□ 2.27
IRF3-220ENST00000598108 RNF181Q9P0P0 153 aa29.21■■■□□ 2.27
IRF3-220ENST00000598108 CCDC191Q8NCU4 936 aa29.2■■■□□ 2.26
IRF3-220ENST00000598108 RBM17Q96I25 401 aaKnown RBP29.2■■■□□ 2.26
IRF3-220ENST00000598108 CRAMP1Q96RY5 1269 aa29.2■■■□□ 2.26
IRF3-220ENST00000598108 ANKRD36CQ5JPF3 1778 aa29.19■■■□□ 2.26
IRF3-220ENST00000598108 SLC51AQ86UW1 340 aa29.19■■■□□ 2.26
IRF3-220ENST00000598108 ZBTB38Q8NAP3 1195 aaPredicted RBP29.19■■■□□ 2.26
IRF3-220ENST00000598108 JARID2Q92833 1246 aaPredicted RBP29.19■■■□□ 2.26
IRF3-220ENST00000598108 FKBP5Q13451 457 aaPredicted RBP29.18■■■□□ 2.26
IRF3-220ENST00000598108 ZNF526Q8TF50 670 aaPredicted RBP29.18■■■□□ 2.26
IRF3-220ENST00000598108 CWC25Q9NXE8 425 aaPredicted RBP29.18■■■□□ 2.26
IRF3-220ENST00000598108 ARFGEF2Q9Y6D5 1785 aa29.17■■■□□ 2.26
IRF3-220ENST00000598108 IRS4O14654 1257 aaPredicted RBP29.17■■■□□ 2.26
IRF3-220ENST00000598108 LMNB1P20700 586 aa29.17■■■□□ 2.26
IRF3-220ENST00000598108 SOGA3Q5TF21 947 aa29.17■■■□□ 2.26
IRF3-220ENST00000598108 CWF19L2Q2TBE0 894 aaKnown RBP29.16■■■□□ 2.26
IRF3-220ENST00000598108 CCDC93Q567U6 631 aa29.16■■■□□ 2.26
IRF3-220ENST00000598108 PCCAP05165 728 aaPredicted RBP29.15■■■□□ 2.26
IRF3-220ENST00000598108 TAOK3Q9H2K8 898 aa29.15■■■□□ 2.26
IRF3-220ENST00000598108 DNAAF4Q8WXU2 420 aa29.14■■■□□ 2.26
IRF3-220ENST00000598108 ABCC4O15439 1325 aa29.14■■■□□ 2.25
IRF3-220ENST00000598108 NEURL1BA8MQ27 555 aa29.13■■■□□ 2.25
IRF3-220ENST00000598108 F6X3S4 739 aa29.13■■■□□ 2.25
IRF3-220ENST00000598108 NEXNQ0ZGT2 675 aa29.13■■■□□ 2.25
IRF3-220ENST00000598108 SF3B3Q15393 1217 aaKnown RBP29.13■■■□□ 2.25
IRF3-220ENST00000598108 LTBP3Q9NS15 1303 aa29.13■■■□□ 2.25
IRF3-220ENST00000598108 PPEF1O14829 653 aaPredicted RBP29.11■■■□□ 2.25
IRF3-220ENST00000598108 DDX46Q7L014 1031 aaKnown RBP29.11■■■□□ 2.25
IRF3-220ENST00000598108 RTKN2Q8IZC4 609 aa29.11■■■□□ 2.25
IRF3-220ENST00000598108 MRPL50Q8N5N7 158 aaKnown RBP29.11■■■□□ 2.25
IRF3-220ENST00000598108 GPBP1L1Q9HC44 474 aaPredicted RBP29.1■■■□□ 2.25
IRF3-220ENST00000598108 FKBP4Q02790 459 aaKnown RBP eCLIP29.09■■■□□ 2.25
IRF3-220ENST00000598108 SSH1Q8WYL5 1049 aa29.09■■■□□ 2.25
IRF3-220ENST00000598108 BBOX1O75936 387 aa29.08■■■□□ 2.25
IRF3-220ENST00000598108 HNRNPUQ00839 825 aaKnown RBP eCLIP29.08■■■□□ 2.252e-8■□□□□ 8.3
IRF3-220ENST00000598108 GRAPQ13588 217 aa29.08■■■□□ 2.25
IRF3-220ENST00000598108 GRAPLQ8TC17 118 aaPredicted RBP29.08■■■□□ 2.25
IRF3-220ENST00000598108 ZNF277Q9NRM2 450 aaPredicted RBP29.08■■■□□ 2.25
IRF3-220ENST00000598108 ATP6V0A2Q9Y487 856 aa29.08■■■□□ 2.25
IRF3-220ENST00000598108 SNED1Q8TER0 1413 aa29.08■■■□□ 2.25
IRF3-220ENST00000598108 H7C1W4 665 aa29.07■■■□□ 2.24
IRF3-220ENST00000598108 GCKRQ14397 625 aa29.07■■■□□ 2.24
IRF3-220ENST00000598108 CC2D2BQ6DHV5 1058 aa29.07■■■□□ 2.24
IRF3-220ENST00000598108 LINS1Q8NG48 757 aa29.07■■■□□ 2.24
IRF3-220ENST00000598108 PDE8AO60658 829 aa29.06■■■□□ 2.24
IRF3-220ENST00000598108 BEND3Q5T5X7 828 aa29.06■■■□□ 2.24
IRF3-220ENST00000598108 BCL2L13Q9BXK5 485 aa29.06■■■□□ 2.24
IRF3-220ENST00000598108 CACNA1SQ13698 1873 aa29.06■■■□□ 2.24
IRF3-220ENST00000598108 CDHR2Q9BYE9 1310 aa29.05■■■□□ 2.24
IRF3-220ENST00000598108 CELF1Q92879 486 aaKnown RBP29.05■■■□□ 2.24
IRF3-220ENST00000598108 SBF1O95248 1867 aa29.05■■■□□ 2.24
IRF3-220ENST00000598108 FER1L6Q2WGJ9 1857 aa29.04■■■□□ 2.24
IRF3-220ENST00000598108 HSP90B1P14625 803 aaKnown RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms