RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	STK3	Q13188	491 aa		11.9	□□□□□ -0.5
FARP1-222	ENST00000597777	DRC7	Q8IY82	874 aa		11.9	□□□□□ -0.5
FARP1-222	ENST00000597777	NEUROD6	Q96NK8	337 aa		11.9	□□□□□ -0.5
FARP1-222	ENST00000597777	ALDH1L1	O75891	902 aa		11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	SSFA2	P28290	1259 aa		11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	GNAI3	P08754	354 aa		11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	TCEANC2	Q96MN5	208 aa		11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	PALLD	Q8WX93	1383 aa		11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	PI4KAP2	A4QPH2	592 aa		11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	RBM6	P78332	1123 aa	Known RBP	11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	BEND3	Q5T5X7	828 aa		11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	PI4KAP1	Q8N8J0	262 aa		11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	SRCIN1	Q9C0H9	1055 aa		11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	TOMM22	Q9NS69	142 aa		11.89	□□□□□ -0.51
FARP1-222	ENST00000597777	CWC27	Q6UX04	472 aa	Known RBP	11.88	□□□□□ -0.51
FARP1-222	ENST00000597777	NBPF26	B4DH59	902 aa		11.88	□□□□□ -0.51
FARP1-222	ENST00000597777	NBPF14	Q5TI25	921 aa		11.88	□□□□□ -0.51
FARP1-222	ENST00000597777	NBPF10	Q6P3W6	841 aa	Known RBP	11.88	□□□□□ -0.51
FARP1-222	ENST00000597777	NBPF15	Q8N660	670 aa		11.88	□□□□□ -0.51
FARP1-222	ENST00000597777	XAGE3	Q8WTP9	111 aa		11.88	□□□□□ -0.51
FARP1-222	ENST00000597777	ACSBG1	Q96GR2	724 aa		11.88	□□□□□ -0.51
FARP1-222	ENST00000597777	DIAPH3	Q9NSV4	1193 aa		11.88	□□□□□ -0.51
FARP1-222	ENST00000597777	MAP3K2	Q9Y2U5	619 aa		11.88	□□□□□ -0.51
FARP1-222	ENST00000597777	SRGAP3	O43295	1099 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	CYP19A1	P11511	503 aa	Predicted RBP	11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	PLBD2	Q8NHP8	589 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	CDC45	O75419	566 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	MCM4	P33991	863 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	FERMT3	Q86UX7	667 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	DNAJC10	Q8IXB1	793 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	SLC4A9	Q96Q91	983 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	AFDN	P55196	1824 aa	Known RBP	11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	FIBP	O43427	364 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	TBC1D9	Q6ZT07	1266 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	COPS6	Q7L5N1	327 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	LINS1	Q8NG48	757 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	HDAC5	Q9UQL6	1122 aa		11.87	□□□□□ -0.51
FARP1-222	ENST00000597777	ANKRD13D	Q6ZTN6	518 aa		11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	RIC3	Q7Z5B4	369 aa		11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	LOC102724428	A0A0B4J2F2	783 aa		11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	SIK1	P57059	783 aa		11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	TAF7L	Q5H9L4	462 aa		11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	DNAJC2	Q99543	621 aa	Known RBP	11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	METTL22	Q9BUU2	404 aa	Predicted RBP	11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	UTY	O14607	1347 aa		11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	ANKRD36C	Q5JPF3	1778 aa		11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	IFIT2	P09913	472 aa	Known RBP	11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	LRRFIP2	Q9Y608	721 aa	Known RBP	11.86	□□□□□ -0.51
FARP1-222	ENST00000597777	GNAI2	P04899	355 aa		11.85	□□□□□ -0.51
FARP1-222	ENST00000597777	NEXN	Q0ZGT2	675 aa		11.85	□□□□□ -0.51
FARP1-222	ENST00000597777	A1BG	P04217	495 aa		11.85	□□□□□ -0.51
FARP1-222	ENST00000597777	ANKRD44	Q8N8A2	993 aa		11.85	□□□□□ -0.51
FARP1-222	ENST00000597777	COL15A1	P39059	1388 aa		11.85	□□□□□ -0.51
FARP1-222	ENST00000597777	KCNQ2	O43526	872 aa		11.85	□□□□□ -0.51
FARP1-222	ENST00000597777	FAM196A	Q6ZSG2	479 aa		11.85	□□□□□ -0.51
FARP1-222	ENST00000597777	USP44	Q9H0E7	712 aa		11.85	□□□□□ -0.51
FARP1-222	ENST00000597777	IL6ST	P40189	918 aa	Predicted RBP	11.84	□□□□□ -0.51
FARP1-222	ENST00000597777	KRT27	Q7Z3Y8	459 aa		11.84	□□□□□ -0.51
FARP1-222	ENST00000597777	GCC1	Q96CN9	775 aa		11.84	□□□□□ -0.51
FARP1-222	ENST00000597777	SMC5	Q8IY18	1101 aa		11.84	□□□□□ -0.51
FARP1-222	ENST00000597777	RBM27	Q9P2N5	1060 aa	Known RBP	11.84	□□□□□ -0.51
FARP1-222	ENST00000597777	TAF1L	Q8IZX4	1826 aa		11.84	□□□□□ -0.51
FARP1-222	ENST00000597777	CEP85	Q6P2H3	762 aa		11.84	□□□□□ -0.51
FARP1-222	ENST00000597777	CREBRF	Q8IUR6	639 aa		11.84	□□□□□ -0.51
FARP1-222	ENST00000597777	ATP6V1A	P38606	617 aa		11.83	□□□□□ -0.52
FARP1-222	ENST00000597777	BCOR	Q6W2J9	1755 aa		11.83	□□□□□ -0.52
FARP1-222	ENST00000597777	HMGB2	P26583	209 aa	Known RBP	11.83	□□□□□ -0.52
FARP1-222	ENST00000597777	ISY1	Q9ULR0	285 aa	Known RBP	11.83	□□□□□ -0.52
FARP1-222	ENST00000597777	ZRSR1	Q15695	479 aa	Known RBP	11.83	□□□□□ -0.52
FARP1-222	ENST00000597777	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.83	□□□□□ -0.52
FARP1-222	ENST00000597777	CCDC87	Q9NVE4	849 aa		11.83	□□□□□ -0.52
FARP1-222	ENST00000597777	CNTNAP4	Q9C0A0	1308 aa		11.83	□□□□□ -0.52
FARP1-222	ENST00000597777	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.83	□□□□□ -0.52
FARP1-222	ENST00000597777	RGPD4	Q7Z3J3	1758 aa		11.83	□□□□□ -0.52
FARP1-222	ENST00000597777	RGL2	O15211	777 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	CPA1	P15085	419 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	KIF6	Q6ZMV9	814 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	ZMYND15	Q9H091	742 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	NEURL1B	A8MQ27	555 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	REC8	O95072	547 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	RBM10	P98175	930 aa	Known RBP	11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	SIRT2	Q8IXJ6	389 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	TNPO1	Q92973	898 aa	Known RBP	11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	IGKV5-2	P06315	115 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	RXRB	P28702	533 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	TBC1D32	Q96NH3	1257 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	MTMR7	Q9Y216	660 aa		11.82	□□□□□ -0.52
FARP1-222	ENST00000597777	DDX11L8	A8MPP1	907 aa		11.81	□□□□□ -0.52
FARP1-222	ENST00000597777	ATP5J2-PTCD1	G3V325	749 aa		11.81	□□□□□ -0.52
FARP1-222	ENST00000597777	MAP3K15	Q6ZN16	1313 aa		11.81	□□□□□ -0.52
FARP1-222	ENST00000597777	ERVV-1	B6SEH8	477 aa		11.81	□□□□□ -0.52
FARP1-222	ENST00000597777	ITPK1	Q13572	414 aa		11.81	□□□□□ -0.52
FARP1-222	ENST00000597777	RC3H1	Q5TC82	1133 aa	Known RBP	11.81	□□□□□ -0.52
FARP1-222	ENST00000597777	INTS5	Q6P9B9	1019 aa	Known RBP	11.81	□□□□□ -0.52
FARP1-222	ENST00000597777	FAM13B	Q9NYF5	915 aa		11.81	□□□□□ -0.52
FARP1-222	ENST00000597777	GRM8	O00222	908 aa		11.81	□□□□□ -0.52
FARP1-222	ENST00000597777	RAB11FIP4	Q86YS3	637 aa		11.81	□□□□□ -0.52
FARP1-222	ENST00000597777	NDUFB9	Q9Y6M9	179 aa		11.81	□□□□□ -0.52

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