RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 C21orf2O43822 256 aa24.69■■□□□ 1.54
HOMER3-209ENST00000596482 RASSF7Q02833 373 aa24.69■■□□□ 1.54
HOMER3-209ENST00000596482 SOGA3Q5TF21 947 aa24.69■■□□□ 1.54
HOMER3-209ENST00000596482 C9orf131Q5VYM1 1079 aa24.69■■□□□ 1.54
HOMER3-209ENST00000596482 NLRP10Q86W26 655 aa24.69■■□□□ 1.54
HOMER3-209ENST00000596482 RPGRQ92834 1020 aaKnown RBP24.69■■□□□ 1.54
HOMER3-209ENST00000596482 DDX58O95786 925 aaKnown RBP24.68■■□□□ 1.54
HOMER3-209ENST00000596482 RIC3Q7Z5B4 369 aa24.68■■□□□ 1.54
HOMER3-209ENST00000596482 PHAXQ9H814 394 aaKnown RBP24.68■■□□□ 1.54
HOMER3-209ENST00000596482 RNF181Q9P0P0 153 aa24.68■■□□□ 1.54
HOMER3-209ENST00000596482 CRY2Q49AN0 593 aa24.67■■□□□ 1.54
HOMER3-209ENST00000596482 TRMT112Q9UI30 125 aaKnown RBP24.67■■□□□ 1.54
HOMER3-209ENST00000596482 SLX4Q8IY92 1834 aa24.66■■□□□ 1.54
HOMER3-209ENST00000596482 ALDH1B1P30837 517 aa24.66■■□□□ 1.54
HOMER3-209ENST00000596482 ZNF526Q8TF50 670 aaPredicted RBP24.66■■□□□ 1.54
HOMER3-209ENST00000596482 GPBP1L1Q9HC44 474 aaPredicted RBP24.66■■□□□ 1.54
HOMER3-209ENST00000596482 SH3TC1Q8TE82 1336 aa24.65■■□□□ 1.54
HOMER3-209ENST00000596482 NLRP3Q96P20 1036 aa24.65■■□□□ 1.54
HOMER3-209ENST00000596482 NFKBIEO00221 500 aa24.64■■□□□ 1.54
HOMER3-209ENST00000596482 LMNB1P20700 586 aa24.64■■□□□ 1.54
HOMER3-209ENST00000596482 EXOSC9Q06265 439 aaKnown RBP24.64■■□□□ 1.54
HOMER3-209ENST00000596482 DIEXFQ68CQ4 756 aaKnown RBP24.64■■□□□ 1.54
HOMER3-209ENST00000596482 ISCA1Q9BUE6 129 aa24.64■■□□□ 1.54
HOMER3-209ENST00000596482 ZNF521Q96K83 1311 aa24.63■■□□□ 1.53
HOMER3-209ENST00000596482 ATP5J2-PTCD1G3V325 749 aa24.63■■□□□ 1.53
HOMER3-209ENST00000596482 TCERG1O14776 1098 aaKnown RBP24.63■■□□□ 1.53
HOMER3-209ENST00000596482 CCDC93Q567U6 631 aa24.63■■□□□ 1.53
HOMER3-209ENST00000596482 TAOK3Q9H2K8 898 aa24.63■■□□□ 1.53
HOMER3-209ENST00000596482 RBM17Q96I25 401 aaKnown RBP24.62■■□□□ 1.53
HOMER3-209ENST00000596482 SPINK5Q9NQ38 1064 aaPredicted RBP24.62■■□□□ 1.53
HOMER3-209ENST00000596482 FER1L6Q2WGJ9 1857 aa24.62■■□□□ 1.53
HOMER3-209ENST00000596482 TIAM2Q8IVF5 1701 aa24.61■■□□□ 1.53
HOMER3-209ENST00000596482 SLC10A5Q5PT55 438 aa24.61■■□□□ 1.53
HOMER3-209ENST00000596482 MYD88Q99836 296 aa24.61■■□□□ 1.53
HOMER3-209ENST00000596482 SBF1O95248 1867 aa24.61■■□□□ 1.53
HOMER3-209ENST00000596482 LTBP3Q9NS15 1303 aa24.61■■□□□ 1.53
HOMER3-209ENST00000596482 ZC3H4Q9UPT8 1303 aaKnown RBP24.61■■□□□ 1.53
HOMER3-209ENST00000596482 HOXA10P31260 410 aaPredicted RBP24.6■■□□□ 1.53
HOMER3-209ENST00000596482 C3orf67Q6ZVT6 689 aa24.6■■□□□ 1.53
HOMER3-209ENST00000596482 ZNF428Q96B54 188 aa24.6■■□□□ 1.53
HOMER3-209ENST00000596482 SLC4A2P04920 1241 aa24.59■■□□□ 1.53
HOMER3-209ENST00000596482 HCLS1P14317 486 aaPredicted RBP24.59■■□□□ 1.53
HOMER3-209ENST00000596482 TRIM28Q13263 835 aaKnown RBP24.59■■□□□ 1.53
HOMER3-209ENST00000596482 MAP3K2Q9Y2U5 619 aa24.59■■□□□ 1.53
HOMER3-209ENST00000596482 LAMB2P55268 1798 aa24.58■■□□□ 1.53
HOMER3-209ENST00000596482 VAMP4O75379 141 aa24.58■■□□□ 1.53
HOMER3-209ENST00000596482 CRAMP1Q96RY5 1269 aa24.58■■□□□ 1.53
HOMER3-209ENST00000596482 METTL22Q9BUU2 404 aaPredicted RBP24.58■■□□□ 1.53
HOMER3-209ENST00000596482 PPEF1O14829 653 aaPredicted RBP24.57■■□□□ 1.52
HOMER3-209ENST00000596482 KSR2Q6VAB6 950 aa24.57■■□□□ 1.52
HOMER3-209ENST00000596482 RTKN2Q8IZC4 609 aa24.57■■□□□ 1.52
HOMER3-209ENST00000596482 C7orf43Q8WVR3 580 aa24.57■■□□□ 1.52
HOMER3-209ENST00000596482 DDX60Q8IY21 1712 aaKnown RBP24.57■■□□□ 1.52
HOMER3-209ENST00000596482 PI4KAP2A4QPH2 592 aa24.56■■□□□ 1.52
HOMER3-209ENST00000596482 E9PSI1 815 aa24.56■■□□□ 1.52
HOMER3-209ENST00000596482 NEXNQ0ZGT2 675 aa24.56■■□□□ 1.52
HOMER3-209ENST00000596482 FLIIQ13045 1269 aa24.56■■□□□ 1.52
HOMER3-209ENST00000596482 SYNE4Q8N205 404 aa24.56■■□□□ 1.52
HOMER3-209ENST00000596482 PI4KAP1Q8N8J0 262 aa24.56■■□□□ 1.52
HOMER3-209ENST00000596482 CCDC191Q8NCU4 936 aa24.56■■□□□ 1.52
HOMER3-209ENST00000596482 FAM89AQ96GI7 184 aa24.56■■□□□ 1.52
HOMER3-209ENST00000596482 PRELPP51888 382 aa24.55■■□□□ 1.52
HOMER3-209ENST00000596482 CWC25Q9NXE8 425 aaPredicted RBP24.55■■□□□ 1.52
HOMER3-209ENST00000596482 ABCC4O15439 1325 aa24.55■■□□□ 1.52
HOMER3-209ENST00000596482 KDM2BQ8NHM5 1336 aa24.55■■□□□ 1.52
HOMER3-209ENST00000596482 HSP90B1P14625 803 aaKnown RBP24.54■■□□□ 1.52
HOMER3-209ENST00000596482 FKBP4Q02790 459 aaKnown RBP eCLIP24.54■■□□□ 1.52
HOMER3-209ENST00000596482 FKBP5Q13451 457 aaPredicted RBP24.54■■□□□ 1.52
HOMER3-209ENST00000596482 RTL5Q5HYW3 569 aaPredicted RBP24.54■■□□□ 1.52
HOMER3-209ENST00000596482 CC2D2BQ6DHV5 1058 aa24.54■■□□□ 1.52
HOMER3-209ENST00000596482 DDX46Q7L014 1031 aaKnown RBP24.54■■□□□ 1.52
HOMER3-209ENST00000596482 G2E3Q7L622 706 aa24.54■■□□□ 1.52
HOMER3-209ENST00000596482 ZBTB38Q8NAP3 1195 aaPredicted RBP24.54■■□□□ 1.52
HOMER3-209ENST00000596482 TMX4Q9H1E5 349 aaPredicted RBP24.54■■□□□ 1.52
HOMER3-209ENST00000596482 IRS4O14654 1257 aaPredicted RBP24.53■■□□□ 1.52
HOMER3-209ENST00000596482 OLFM4Q6UX06 510 aa24.53■■□□□ 1.52
HOMER3-209ENST00000596482 CCDC88AQ3V6T2 1871 aa24.52■■□□□ 1.52
HOMER3-209ENST00000596482 CACNA1FO60840 1977 aa24.52■■□□□ 1.52
HOMER3-209ENST00000596482 GRIPAP1Q4V328 841 aa24.51■■□□□ 1.51
HOMER3-209ENST00000596482 PCCAP05165 728 aaPredicted RBP24.5■■□□□ 1.51
HOMER3-209ENST00000596482 MIER1Q8N108 512 aa24.5■■□□□ 1.51
HOMER3-209ENST00000596482 DICER1Q9UPY3 1922 aaKnown RBP24.5■■□□□ 1.51
HOMER3-209ENST00000596482 SNED1Q8TER0 1413 aa24.5■■□□□ 1.51
HOMER3-209ENST00000596482 C1QTNF8P60827 252 aa24.49■■□□□ 1.51
HOMER3-209ENST00000596482 GRAPQ13588 217 aa24.49■■□□□ 1.51
HOMER3-209ENST00000596482 GRAPLQ8TC17 118 aaPredicted RBP24.49■■□□□ 1.51
HOMER3-209ENST00000596482 PSMD1Q99460 953 aa24.49■■□□□ 1.51
HOMER3-209ENST00000596482 IGKV5-2P06315 115 aa24.48■■□□□ 1.51
HOMER3-209ENST00000596482 DNAAF4Q8WXU2 420 aa24.48■■□□□ 1.51
HOMER3-209ENST00000596482 NMRK2Q9NPI5 230 aa24.48■■□□□ 1.51
HOMER3-209ENST00000596482 ZNF277Q9NRM2 450 aaPredicted RBP24.48■■□□□ 1.51
HOMER3-209ENST00000596482 BBOX1O75936 387 aa24.47■■□□□ 1.51
HOMER3-209ENST00000596482 SLFN5Q08AF3 891 aa24.47■■□□□ 1.51
HOMER3-209ENST00000596482 SF3B3Q15393 1217 aaKnown RBP24.47■■□□□ 1.51
HOMER3-209ENST00000596482 ATP6V0A2Q9Y487 856 aa24.47■■□□□ 1.51
HOMER3-209ENST00000596482 CDHR2Q9BYE9 1310 aa24.46■■□□□ 1.51
HOMER3-209ENST00000596482 GLTPD2A6NH11 291 aa24.46■■□□□ 1.51
HOMER3-209ENST00000596482 NEURL1BA8MQ27 555 aa24.46■■□□□ 1.51
HOMER3-209ENST00000596482 KIF3CO14782 793 aa24.46■■□□□ 1.51
HOMER3-209ENST00000596482 IARSP41252 1262 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms